Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5H:51005:52390
Extra
PDB:
ATOM 1 O3' A A1004 127.436 -34.254 280.142 1.00 52.32 O
ATOM 2 P A A1005 126.435 -34.324 278.930 1.00 46.59 P
ATOM 3 OP1 A A1005 125.202 -35.023 279.372 1.00 46.95 O
ATOM 4 OP2 A A1005 127.176 -34.854 277.787 1.00 46.46 O
ATOM 5 O5' A A1005 126.139 -32.806 278.650 1.00 46.27 O
ATOM 6 C5' A A1005 125.542 -31.956 279.597 1.00 46.30 C
ATOM 7 C4' A A1005 125.458 -30.588 279.019 1.00 45.96 C
ATOM 8 O4' A A1005 126.808 -30.053 278.873 1.00 45.68 O
ATOM 9 C3' A A1005 124.895 -30.524 277.612 1.00 45.83 C
ATOM 10 O3' A A1005 123.491 -30.555 277.596 1.00 46.02 O
ATOM 11 C2' A A1005 125.491 -29.223 277.100 1.00 45.45 C
ATOM 12 O2' A A1005 124.846 -28.114 277.702 1.00 45.40 O
ATOM 13 C1' A A1005 126.906 -29.305 277.682 1.00 45.36 C
ATOM 14 N9 A A1005 127.839 -29.989 276.748 1.00 45.27 N
ATOM 15 C8 A A1005 128.173 -31.325 276.675 1.00 45.48 C
ATOM 16 N7 A A1005 128.974 -31.611 275.676 1.00 45.33 N
ATOM 17 C5 A A1005 129.177 -30.397 275.041 1.00 44.99 C
ATOM 18 C6 A A1005 129.925 -30.027 273.921 1.00 44.72 C
ATOM 19 N6 A A1005 130.662 -30.872 273.191 1.00 44.73 N
ATOM 20 N1 A A1005 129.868 -28.722 273.558 1.00 44.44 N
ATOM 21 C2 A A1005 129.169 -27.841 274.271 1.00 44.43 C
ATOM 22 N3 A A1005 128.442 -28.089 275.333 1.00 44.67 N
ATOM 23 C4 A A1005 128.479 -29.389 275.672 1.00 44.95 C
ATOM 24 P U A1006 122.670 -31.189 276.359 1.00 44.44 P
ATOM 25 OP1 U A1006 121.259 -30.798 276.526 1.00 44.58 O
ATOM 26 OP2 U A1006 122.987 -32.610 276.312 1.00 44.67 O
ATOM 27 O5' U A1006 123.275 -30.459 275.099 1.00 44.06 O
TER
ATOM 1 O3' A B2389 133.671 -29.122 269.867 1.00 39.56 O
ATOM 2 P A B2390 132.969 -30.534 269.756 1.00 46.30 P
ATOM 3 OP1 A B2390 132.980 -30.885 268.334 1.00 46.25 O
ATOM 4 OP2 A B2390 131.688 -30.448 270.461 1.00 46.46 O
ATOM 5 O5' A B2390 133.933 -31.498 270.554 1.00 46.48 O
ATOM 6 C5' A B2390 134.922 -32.237 269.871 1.00 46.49 C
ATOM 7 C4' A B2390 134.864 -33.695 270.216 1.00 46.82 C
ATOM 8 O4' A B2390 134.895 -33.856 271.649 1.00 46.98 O
ATOM 9 C3' A B2390 133.621 -34.433 269.813 1.00 47.05 C
ATOM 10 O3' A B2390 133.581 -34.754 268.437 1.00 47.01 O
ATOM 11 C2' A B2390 133.671 -35.644 270.723 1.00 47.39 C
ATOM 12 O2' A B2390 134.616 -36.577 270.249 1.00 47.48 O
ATOM 13 C1' A B2390 134.213 -35.020 272.008 1.00 47.32 C
ATOM 14 N9 A B2390 133.142 -34.638 272.916 1.00 47.42 N
ATOM 15 C8 A B2390 132.595 -33.401 273.021 1.00 47.22 C
ATOM 16 N7 A B2390 131.642 -33.356 273.898 1.00 47.39 N
ATOM 17 C5 A B2390 131.580 -34.637 274.387 1.00 47.72 C
ATOM 18 C6 A B2390 130.786 -35.210 275.359 1.00 48.03 C
ATOM 19 N6 A B2390 129.839 -34.546 276.003 1.00 48.06 N
ATOM 20 N1 A B2390 130.982 -36.504 275.630 1.00 48.33 N
ATOM 21 C2 A B2390 131.929 -37.164 274.969 1.00 48.31 C
ATOM 22 N3 A B2390 132.754 -36.730 274.040 1.00 48.03 N
ATOM 23 C4 A B2390 132.506 -35.441 273.795 1.00 47.74 C
ATOM 24 P C B2391 132.172 -34.708 267.658 1.00 42.98 P
ATOM 25 OP1 C B2391 132.285 -33.661 266.618 1.00 42.67 O
ATOM 26 OP2 C B2391 131.135 -34.574 268.692 1.00 43.13 O
ATOM 27 O5' C B2391 132.057 -36.137 266.971 1.00 43.26 O
TER
ATOM 2 P A A1005 126.435 -34.324 278.930 1.00 46.59 P
ATOM 3 OP1 A A1005 125.202 -35.023 279.372 1.00 46.95 O
ATOM 4 OP2 A A1005 127.176 -34.854 277.787 1.00 46.46 O
ATOM 5 O5' A A1005 126.139 -32.806 278.650 1.00 46.27 O
ATOM 6 C5' A A1005 125.542 -31.956 279.597 1.00 46.30 C
ATOM 7 C4' A A1005 125.458 -30.588 279.019 1.00 45.96 C
ATOM 8 O4' A A1005 126.808 -30.053 278.873 1.00 45.68 O
ATOM 9 C3' A A1005 124.895 -30.524 277.612 1.00 45.83 C
ATOM 10 O3' A A1005 123.491 -30.555 277.596 1.00 46.02 O
ATOM 11 C2' A A1005 125.491 -29.223 277.100 1.00 45.45 C
ATOM 12 O2' A A1005 124.846 -28.114 277.702 1.00 45.40 O
ATOM 13 C1' A A1005 126.906 -29.305 277.682 1.00 45.36 C
ATOM 14 N9 A A1005 127.839 -29.989 276.748 1.00 45.27 N
ATOM 15 C8 A A1005 128.173 -31.325 276.675 1.00 45.48 C
ATOM 16 N7 A A1005 128.974 -31.611 275.676 1.00 45.33 N
ATOM 17 C5 A A1005 129.177 -30.397 275.041 1.00 44.99 C
ATOM 18 C6 A A1005 129.925 -30.027 273.921 1.00 44.72 C
ATOM 19 N6 A A1005 130.662 -30.872 273.191 1.00 44.73 N
ATOM 20 N1 A A1005 129.868 -28.722 273.558 1.00 44.44 N
ATOM 21 C2 A A1005 129.169 -27.841 274.271 1.00 44.43 C
ATOM 22 N3 A A1005 128.442 -28.089 275.333 1.00 44.67 N
ATOM 23 C4 A A1005 128.479 -29.389 275.672 1.00 44.95 C
ATOM 24 P U A1006 122.670 -31.189 276.359 1.00 44.44 P
ATOM 25 OP1 U A1006 121.259 -30.798 276.526 1.00 44.58 O
ATOM 26 OP2 U A1006 122.987 -32.610 276.312 1.00 44.67 O
ATOM 27 O5' U A1006 123.275 -30.459 275.099 1.00 44.06 O
TER
ATOM 1 O3' A B2389 133.671 -29.122 269.867 1.00 39.56 O
ATOM 2 P A B2390 132.969 -30.534 269.756 1.00 46.30 P
ATOM 3 OP1 A B2390 132.980 -30.885 268.334 1.00 46.25 O
ATOM 4 OP2 A B2390 131.688 -30.448 270.461 1.00 46.46 O
ATOM 5 O5' A B2390 133.933 -31.498 270.554 1.00 46.48 O
ATOM 6 C5' A B2390 134.922 -32.237 269.871 1.00 46.49 C
ATOM 7 C4' A B2390 134.864 -33.695 270.216 1.00 46.82 C
ATOM 8 O4' A B2390 134.895 -33.856 271.649 1.00 46.98 O
ATOM 9 C3' A B2390 133.621 -34.433 269.813 1.00 47.05 C
ATOM 10 O3' A B2390 133.581 -34.754 268.437 1.00 47.01 O
ATOM 11 C2' A B2390 133.671 -35.644 270.723 1.00 47.39 C
ATOM 12 O2' A B2390 134.616 -36.577 270.249 1.00 47.48 O
ATOM 13 C1' A B2390 134.213 -35.020 272.008 1.00 47.32 C
ATOM 14 N9 A B2390 133.142 -34.638 272.916 1.00 47.42 N
ATOM 15 C8 A B2390 132.595 -33.401 273.021 1.00 47.22 C
ATOM 16 N7 A B2390 131.642 -33.356 273.898 1.00 47.39 N
ATOM 17 C5 A B2390 131.580 -34.637 274.387 1.00 47.72 C
ATOM 18 C6 A B2390 130.786 -35.210 275.359 1.00 48.03 C
ATOM 19 N6 A B2390 129.839 -34.546 276.003 1.00 48.06 N
ATOM 20 N1 A B2390 130.982 -36.504 275.630 1.00 48.33 N
ATOM 21 C2 A B2390 131.929 -37.164 274.969 1.00 48.31 C
ATOM 22 N3 A B2390 132.754 -36.730 274.040 1.00 48.03 N
ATOM 23 C4 A B2390 132.506 -35.441 273.795 1.00 47.74 C
ATOM 24 P C B2391 132.172 -34.708 267.658 1.00 42.98 P
ATOM 25 OP1 C B2391 132.285 -33.661 266.618 1.00 42.67 O
ATOM 26 OP2 C B2391 131.135 -34.574 268.692 1.00 43.13 O
ATOM 27 O5' C B2391 132.057 -36.137 266.971 1.00 43.26 O
TER
Atoms:
OP1: (125.202,-35.023,279.372)
OP2: (127.176,-34.854,277.787)
C3': (124.895,-30.524,277.612)
C1': (126.906,-29.305,277.682)
C5': (125.542,-31.956,279.597)
O4': (126.808,-30.053,278.873)
C8: (128.173,-31.325,276.675)
O2': (124.846,-28.114,277.702)
C6: (129.925,-30.027,273.921)
C5: (129.177,-30.397,275.041)
C4: (128.479,-29.389,275.672)
P: (126.435,-34.324,278.930)
C4': (125.458,-30.588,279.019)
C2': (125.491,-29.223,277.100)
C2: (129.169,-27.841,274.271)
N1: (129.868,-28.722,273.558)
N3: (128.442,-28.089,275.333)
N6: (130.662,-30.872,273.191)
N7: (128.974,-31.611,275.676)
N9: (127.839,-29.989,276.748)
O5': (126.139,-32.806,278.650)
O3': (123.491,-30.555,277.596)
OP2: (127.176,-34.854,277.787)
C3': (124.895,-30.524,277.612)
C1': (126.906,-29.305,277.682)
C5': (125.542,-31.956,279.597)
O4': (126.808,-30.053,278.873)
C8: (128.173,-31.325,276.675)
O2': (124.846,-28.114,277.702)
C6: (129.925,-30.027,273.921)
C5: (129.177,-30.397,275.041)
C4: (128.479,-29.389,275.672)
P: (126.435,-34.324,278.930)
C4': (125.458,-30.588,279.019)
C2': (125.491,-29.223,277.100)
C2: (129.169,-27.841,274.271)
N1: (129.868,-28.722,273.558)
N3: (128.442,-28.089,275.333)
N6: (130.662,-30.872,273.191)
N7: (128.974,-31.611,275.676)
N9: (127.839,-29.989,276.748)
O5': (126.139,-32.806,278.650)
O3': (123.491,-30.555,277.596)
OP1: (132.980,-30.885,268.334)
OP2: (131.688,-30.448,270.461)
C3': (133.621,-34.433,269.813)
C1': (134.213,-35.020,272.008)
C5': (134.922,-32.237,269.871)
O4': (134.895,-33.856,271.649)
C8: (132.595,-33.401,273.021)
O2': (134.616,-36.577,270.249)
C6: (130.786,-35.210,275.359)
C5: (131.580,-34.637,274.387)
C4: (132.506,-35.441,273.795)
P: (132.969,-30.534,269.756)
C4': (134.864,-33.695,270.216)
C2': (133.671,-35.644,270.723)
C2: (131.929,-37.164,274.969)
N1: (130.982,-36.504,275.630)
N3: (132.754,-36.730,274.040)
N6: (129.839,-34.546,276.003)
N7: (131.642,-33.356,273.898)
N9: (133.142,-34.638,272.916)
O5': (133.933,-31.498,270.554)
O3': (133.581,-34.754,268.437)
OP2: (131.688,-30.448,270.461)
C3': (133.621,-34.433,269.813)
C1': (134.213,-35.020,272.008)
C5': (134.922,-32.237,269.871)
O4': (134.895,-33.856,271.649)
C8: (132.595,-33.401,273.021)
O2': (134.616,-36.577,270.249)
C6: (130.786,-35.210,275.359)
C5: (131.580,-34.637,274.387)
C4: (132.506,-35.441,273.795)
P: (132.969,-30.534,269.756)
C4': (134.864,-33.695,270.216)
C2': (133.671,-35.644,270.723)
C2: (131.929,-37.164,274.969)
N1: (130.982,-36.504,275.630)
N3: (132.754,-36.730,274.040)
N6: (129.839,-34.546,276.003)
N7: (131.642,-33.356,273.898)
N9: (133.142,-34.638,272.916)
O5': (133.933,-31.498,270.554)
O3': (133.581,-34.754,268.437)
Image (generated by PyMOL):