ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQL:01030:0900

Extra

PDB:
ATOM 1 O3' A A1029 40.777 101.544 90.712 1.00 32.80 O
ATOM 2 P G A1030 40.130 101.919 89.283 1.00 32.85 P
ATOM 3 OP1 G A1030 40.872 101.156 88.241 1.00 30.60 O
ATOM 4 OP2 G A1030 40.038 103.392 89.191 1.00 34.26 O
ATOM 5 O5' G A1030 38.653 101.345 89.374 1.00 35.14 O
ATOM 6 C5' G A1030 37.619 101.769 88.472 1.00 30.23 C
ATOM 7 C4' G A1030 36.545 100.709 88.402 1.00 30.61 C
ATOM 8 O4' G A1030 37.068 99.561 87.690 1.00 27.95 O
ATOM 9 C3' G A1030 36.054 100.182 89.744 1.00 31.34 C
ATOM 10 O3' G A1030 34.680 99.871 89.632 1.00 31.43 O
ATOM 11 C2' G A1030 36.888 98.921 89.931 1.00 30.17 C
ATOM 12 O2' G A1030 36.259 97.972 90.758 1.00 29.22 O
ATOM 13 C1' G A1030 37.004 98.411 88.497 1.00 28.89 C
ATOM 14 N9 G A1030 38.216 97.632 88.237 1.00 32.59 N
ATOM 15 C8 G A1030 39.478 98.135 88.035 1.00 30.15 C
ATOM 16 N7 G A1030 40.371 97.210 87.834 1.00 31.48 N
ATOM 17 C5 G A1030 39.662 96.020 87.902 1.00 31.76 C
ATOM 18 C6 G A1030 40.107 94.675 87.765 1.00 31.23 C
ATOM 19 O6 G A1030 41.254 94.256 87.571 1.00 31.52 O
ATOM 20 N1 G A1030 39.059 93.777 87.891 1.00 30.95 N
ATOM 21 C2 G A1030 37.756 94.119 88.128 1.00 32.91 C
ATOM 22 N2 G A1030 36.889 93.096 88.212 1.00 33.95 N
ATOM 23 N3 G A1030 37.328 95.367 88.268 1.00 32.32 N
ATOM 24 C4 G A1030 38.329 96.259 88.144 1.00 30.81 C
ATOM 25 P G A1031 33.603 101.055 89.653 1.00 31.45 P
ATOM 26 OP1 G A1031 32.832 100.927 88.408 1.00 34.15 O
ATOM 27 OP2 G A1031 34.293 102.337 89.966 1.00 32.57 O
ATOM 28 O5' G A1031 32.683 100.702 90.899 1.00 33.41 O
TER

ATOM 1 O3' A B 899 40.546 88.571 84.438 1.00 35.02 O
ATOM 2 P A B 900 41.596 88.337 85.629 1.00 36.39 P
ATOM 3 OP1 A B 900 41.730 86.877 85.837 1.00 36.68 O
ATOM 4 OP2 A B 900 41.198 89.214 86.760 1.00 35.10 O
ATOM 5 O5' A B 900 42.973 88.848 85.016 1.00 36.81 O
ATOM 6 C5' A B 900 43.533 88.210 83.853 1.00 36.53 C
ATOM 7 C4' A B 900 44.769 88.942 83.403 1.00 37.34 C
ATOM 8 O4' A B 900 44.410 90.259 82.902 1.00 38.34 O
ATOM 9 C3' A B 900 45.748 89.247 84.518 1.00 36.32 C
ATOM 10 O3' A B 900 46.542 88.127 84.861 1.00 32.24 O
ATOM 11 C2' A B 900 46.524 90.420 83.940 1.00 34.92 C
ATOM 12 O2' A B 900 47.412 90.018 82.917 1.00 35.05 O
ATOM 13 C1' A B 900 45.391 91.210 83.296 1.00 34.03 C
ATOM 14 N9 A B 900 44.755 92.151 84.220 1.00 33.75 N
ATOM 15 C8 A B 900 43.577 91.973 84.896 1.00 34.58 C
ATOM 16 N7 A B 900 43.228 92.997 85.634 1.00 33.57 N
ATOM 17 C5 A B 900 44.250 93.909 85.442 1.00 32.09 C
ATOM 18 C6 A B 900 44.465 95.199 85.948 1.00 30.81 C
ATOM 19 N6 A B 900 43.622 95.819 86.766 1.00 31.43 N
ATOM 20 N1 A B 900 45.588 95.842 85.571 1.00 29.65 N
ATOM 21 C2 A B 900 46.427 95.223 84.726 1.00 33.46 C
ATOM 22 N3 A B 900 46.330 94.016 84.173 1.00 33.66 N
ATOM 23 C4 A B 900 45.204 93.401 84.578 1.00 33.73 C
ATOM 24 P A B 901 47.149 88.036 86.333 1.00 34.58 P
ATOM 25 OP1 A B 901 47.833 86.738 86.445 1.00 32.05 O
ATOM 26 OP2 A B 901 46.099 88.394 87.312 1.00 30.41 O
ATOM 27 O5' A B 901 48.214 89.227 86.335 1.00 35.54 O
TER

Atoms:
OP1: (40.872,101.156,88.241)
OP2: (40.038,103.392,89.191)
C3': (36.054,100.182,89.744)
C1': (37.004,98.411,88.497)
C5': (37.619,101.769,88.472)
O6: (41.254,94.256,87.571)
O4': (37.068,99.561,87.690)
C8: (39.478,98.135,88.035)
C2: (37.756,94.119,88.128)
C6: (40.107,94.675,87.765)
C5: (39.662,96.020,87.902)
C4: (38.329,96.259,88.144)
P: (40.130,101.919,89.283)
C4': (36.545,100.709,88.402)
C2': (36.888,98.921,89.931)
O2': (36.259,97.972,90.758)
N1: (39.059,93.777,87.891)
N2: (36.889,93.096,88.212)
N3: (37.328,95.367,88.268)
N7: (40.371,97.210,87.834)
N9: (38.216,97.632,88.237)
O5': (38.653,101.345,89.374)
O3': (34.680,99.871,89.632)
OP1: (41.730,86.877,85.837)
OP2: (41.198,89.214,86.760)
C3': (45.748,89.247,84.518)
C1': (45.391,91.210,83.296)
C5': (43.533,88.210,83.853)
O4': (44.410,90.259,82.902)
C8: (43.577,91.973,84.896)
O2': (47.412,90.018,82.917)
C6: (44.465,95.199,85.948)
C5: (44.250,93.909,85.442)
C4: (45.204,93.401,84.578)
P: (41.596,88.337,85.629)
C4': (44.769,88.942,83.403)
C2': (46.524,90.420,83.940)
C2: (46.427,95.223,84.726)
N1: (45.588,95.842,85.571)
N3: (46.330,94.016,84.173)
N6: (43.622,95.819,86.766)
N7: (43.228,92.997,85.634)
N9: (44.755,92.151,84.220)
O5': (42.973,88.848,85.016)
O3': (46.542,88.127,84.861)
Image (generated by PyMOL):
PyMOL image
show in jmol