Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01328:02001
Extra
PDB:
ATOM 1 O3' U A1327 44.415 144.634 94.635 1.00 29.93 O
ATOM 2 P A A1328 45.000 146.067 95.061 1.00 29.38 P
ATOM 3 OP1 A A1328 46.176 146.370 94.235 1.00 32.95 O
ATOM 4 OP2 A A1328 45.125 146.063 96.533 1.00 31.81 O
ATOM 5 O5' A A1328 43.870 147.107 94.655 1.00 30.67 O
ATOM 6 C5' A A1328 43.840 148.417 95.240 1.00 29.04 C
ATOM 7 C4' A A1328 43.260 149.410 94.264 1.00 30.74 C
ATOM 8 O4' A A1328 44.161 149.554 93.132 1.00 31.30 O
ATOM 9 C3' A A1328 41.892 149.068 93.678 1.00 29.30 C
ATOM 10 O3' A A1328 41.242 150.302 93.381 1.00 31.04 O
ATOM 11 C2' A A1328 42.277 148.382 92.374 1.00 29.54 C
ATOM 12 O2' A A1328 41.234 148.426 91.427 1.00 29.27 O
ATOM 13 C1' A A1328 43.480 149.229 91.941 1.00 29.27 C
ATOM 14 N9 A A1328 44.421 148.548 91.052 1.00 28.09 N
ATOM 15 C8 A A1328 45.321 147.570 91.379 1.00 29.16 C
ATOM 16 N7 A A1328 45.996 147.107 90.353 1.00 28.88 N
ATOM 17 C5 A A1328 45.510 147.835 89.278 1.00 27.14 C
ATOM 18 C6 A A1328 45.798 147.798 87.898 1.00 25.99 C
ATOM 19 N6 A A1328 46.649 146.939 87.340 1.00 21.96 N
ATOM 20 N1 A A1328 45.155 148.675 87.099 1.00 25.14 N
ATOM 21 C2 A A1328 44.269 149.508 87.652 1.00 25.57 C
ATOM 22 N3 A A1328 43.895 149.622 88.925 1.00 27.35 N
ATOM 23 C4 A A1328 44.560 148.746 89.697 1.00 27.73 C
ATOM 24 P G A1329 39.695 150.537 93.762 1.00 31.06 P
ATOM 25 OP1 G A1329 39.428 150.253 95.195 1.00 29.13 O
ATOM 26 OP2 G A1329 38.889 149.858 92.726 1.00 33.02 O
ATOM 27 O5' G A1329 39.534 152.101 93.506 1.00 33.90 O
TER
ATOM 1 O3' A B2000 49.025 147.548 83.411 1.00 27.99 O
ATOM 2 P A B2001 48.392 146.097 83.642 1.00 28.63 P
ATOM 3 OP1 A B2001 48.202 145.541 82.275 1.00 29.14 O
ATOM 4 OP2 A B2001 47.230 146.208 84.557 1.00 27.21 O
ATOM 5 O5' A B2001 49.552 145.286 84.366 1.00 26.27 O
ATOM 6 C5' A B2001 50.848 145.197 83.755 1.00 26.66 C
ATOM 7 C4' A B2001 51.861 144.679 84.740 1.00 26.04 C
ATOM 8 O4' A B2001 51.969 145.576 85.872 1.00 24.53 O
ATOM 9 C3' A B2001 51.534 143.334 85.355 1.00 25.36 C
ATOM 10 O3' A B2001 51.939 142.313 84.467 1.00 26.71 O
ATOM 11 C2' A B2001 52.373 143.365 86.620 1.00 24.62 C
ATOM 12 O2' A B2001 53.738 143.141 86.336 1.00 22.64 O
ATOM 13 C1' A B2001 52.204 144.824 87.046 1.00 24.90 C
ATOM 14 N9 A B2001 51.081 145.052 87.955 1.00 27.48 N
ATOM 15 C8 A B2001 49.805 145.446 87.635 1.00 26.90 C
ATOM 16 N7 A B2001 49.031 145.625 88.677 1.00 28.16 N
ATOM 17 C5 A B2001 49.846 145.318 89.757 1.00 28.76 C
ATOM 18 C6 A B2001 49.624 145.331 91.144 1.00 29.05 C
ATOM 19 N6 A B2001 48.469 145.681 91.709 1.00 28.47 N
ATOM 20 N1 A B2001 50.647 144.970 91.943 1.00 30.38 N
ATOM 21 C2 A B2001 51.810 144.622 91.380 1.00 30.38 C
ATOM 22 N3 A B2001 52.143 144.575 90.097 1.00 29.44 N
ATOM 23 C4 A B2001 51.106 144.943 89.326 1.00 28.92 C
ATOM 24 P C B2002 51.355 140.835 84.625 1.00 27.49 P
ATOM 25 OP1 C B2002 52.009 140.070 83.530 1.00 27.09 O
ATOM 26 OP2 C B2002 49.876 140.885 84.703 1.00 29.61 O
ATOM 27 O5' C B2002 51.907 140.317 86.030 1.00 27.47 O
TER
ATOM 2 P A A1328 45.000 146.067 95.061 1.00 29.38 P
ATOM 3 OP1 A A1328 46.176 146.370 94.235 1.00 32.95 O
ATOM 4 OP2 A A1328 45.125 146.063 96.533 1.00 31.81 O
ATOM 5 O5' A A1328 43.870 147.107 94.655 1.00 30.67 O
ATOM 6 C5' A A1328 43.840 148.417 95.240 1.00 29.04 C
ATOM 7 C4' A A1328 43.260 149.410 94.264 1.00 30.74 C
ATOM 8 O4' A A1328 44.161 149.554 93.132 1.00 31.30 O
ATOM 9 C3' A A1328 41.892 149.068 93.678 1.00 29.30 C
ATOM 10 O3' A A1328 41.242 150.302 93.381 1.00 31.04 O
ATOM 11 C2' A A1328 42.277 148.382 92.374 1.00 29.54 C
ATOM 12 O2' A A1328 41.234 148.426 91.427 1.00 29.27 O
ATOM 13 C1' A A1328 43.480 149.229 91.941 1.00 29.27 C
ATOM 14 N9 A A1328 44.421 148.548 91.052 1.00 28.09 N
ATOM 15 C8 A A1328 45.321 147.570 91.379 1.00 29.16 C
ATOM 16 N7 A A1328 45.996 147.107 90.353 1.00 28.88 N
ATOM 17 C5 A A1328 45.510 147.835 89.278 1.00 27.14 C
ATOM 18 C6 A A1328 45.798 147.798 87.898 1.00 25.99 C
ATOM 19 N6 A A1328 46.649 146.939 87.340 1.00 21.96 N
ATOM 20 N1 A A1328 45.155 148.675 87.099 1.00 25.14 N
ATOM 21 C2 A A1328 44.269 149.508 87.652 1.00 25.57 C
ATOM 22 N3 A A1328 43.895 149.622 88.925 1.00 27.35 N
ATOM 23 C4 A A1328 44.560 148.746 89.697 1.00 27.73 C
ATOM 24 P G A1329 39.695 150.537 93.762 1.00 31.06 P
ATOM 25 OP1 G A1329 39.428 150.253 95.195 1.00 29.13 O
ATOM 26 OP2 G A1329 38.889 149.858 92.726 1.00 33.02 O
ATOM 27 O5' G A1329 39.534 152.101 93.506 1.00 33.90 O
TER
ATOM 1 O3' A B2000 49.025 147.548 83.411 1.00 27.99 O
ATOM 2 P A B2001 48.392 146.097 83.642 1.00 28.63 P
ATOM 3 OP1 A B2001 48.202 145.541 82.275 1.00 29.14 O
ATOM 4 OP2 A B2001 47.230 146.208 84.557 1.00 27.21 O
ATOM 5 O5' A B2001 49.552 145.286 84.366 1.00 26.27 O
ATOM 6 C5' A B2001 50.848 145.197 83.755 1.00 26.66 C
ATOM 7 C4' A B2001 51.861 144.679 84.740 1.00 26.04 C
ATOM 8 O4' A B2001 51.969 145.576 85.872 1.00 24.53 O
ATOM 9 C3' A B2001 51.534 143.334 85.355 1.00 25.36 C
ATOM 10 O3' A B2001 51.939 142.313 84.467 1.00 26.71 O
ATOM 11 C2' A B2001 52.373 143.365 86.620 1.00 24.62 C
ATOM 12 O2' A B2001 53.738 143.141 86.336 1.00 22.64 O
ATOM 13 C1' A B2001 52.204 144.824 87.046 1.00 24.90 C
ATOM 14 N9 A B2001 51.081 145.052 87.955 1.00 27.48 N
ATOM 15 C8 A B2001 49.805 145.446 87.635 1.00 26.90 C
ATOM 16 N7 A B2001 49.031 145.625 88.677 1.00 28.16 N
ATOM 17 C5 A B2001 49.846 145.318 89.757 1.00 28.76 C
ATOM 18 C6 A B2001 49.624 145.331 91.144 1.00 29.05 C
ATOM 19 N6 A B2001 48.469 145.681 91.709 1.00 28.47 N
ATOM 20 N1 A B2001 50.647 144.970 91.943 1.00 30.38 N
ATOM 21 C2 A B2001 51.810 144.622 91.380 1.00 30.38 C
ATOM 22 N3 A B2001 52.143 144.575 90.097 1.00 29.44 N
ATOM 23 C4 A B2001 51.106 144.943 89.326 1.00 28.92 C
ATOM 24 P C B2002 51.355 140.835 84.625 1.00 27.49 P
ATOM 25 OP1 C B2002 52.009 140.070 83.530 1.00 27.09 O
ATOM 26 OP2 C B2002 49.876 140.885 84.703 1.00 29.61 O
ATOM 27 O5' C B2002 51.907 140.317 86.030 1.00 27.47 O
TER
Atoms:
OP1: (46.176,146.370,94.235)
OP2: (45.125,146.063,96.533)
C3': (41.892,149.068,93.678)
C1': (43.480,149.229,91.941)
C5': (43.840,148.417,95.240)
O4': (44.161,149.554,93.132)
C8: (45.321,147.570,91.379)
O2': (41.234,148.426,91.427)
C6: (45.798,147.798,87.898)
C5: (45.510,147.835,89.278)
C4: (44.560,148.746,89.697)
P: (45.000,146.067,95.061)
C4': (43.260,149.410,94.264)
C2': (42.277,148.382,92.374)
C2: (44.269,149.508,87.652)
N1: (45.155,148.675,87.099)
N3: (43.895,149.622,88.925)
N6: (46.649,146.939,87.340)
N7: (45.996,147.107,90.353)
N9: (44.421,148.548,91.052)
O5': (43.870,147.107,94.655)
O3': (41.242,150.302,93.381)
OP2: (45.125,146.063,96.533)
C3': (41.892,149.068,93.678)
C1': (43.480,149.229,91.941)
C5': (43.840,148.417,95.240)
O4': (44.161,149.554,93.132)
C8: (45.321,147.570,91.379)
O2': (41.234,148.426,91.427)
C6: (45.798,147.798,87.898)
C5: (45.510,147.835,89.278)
C4: (44.560,148.746,89.697)
P: (45.000,146.067,95.061)
C4': (43.260,149.410,94.264)
C2': (42.277,148.382,92.374)
C2: (44.269,149.508,87.652)
N1: (45.155,148.675,87.099)
N3: (43.895,149.622,88.925)
N6: (46.649,146.939,87.340)
N7: (45.996,147.107,90.353)
N9: (44.421,148.548,91.052)
O5': (43.870,147.107,94.655)
O3': (41.242,150.302,93.381)
OP1: (48.202,145.541,82.275)
OP2: (47.230,146.208,84.557)
C3': (51.534,143.334,85.355)
C1': (52.204,144.824,87.046)
C5': (50.848,145.197,83.755)
O4': (51.969,145.576,85.872)
C8: (49.805,145.446,87.635)
O2': (53.738,143.141,86.336)
C6: (49.624,145.331,91.144)
C5: (49.846,145.318,89.757)
C4: (51.106,144.943,89.326)
P: (48.392,146.097,83.642)
C4': (51.861,144.679,84.740)
C2': (52.373,143.365,86.620)
C2: (51.810,144.622,91.380)
N1: (50.647,144.970,91.943)
N3: (52.143,144.575,90.097)
N6: (48.469,145.681,91.709)
N7: (49.031,145.625,88.677)
N9: (51.081,145.052,87.955)
O5': (49.552,145.286,84.366)
O3': (51.939,142.313,84.467)
OP2: (47.230,146.208,84.557)
C3': (51.534,143.334,85.355)
C1': (52.204,144.824,87.046)
C5': (50.848,145.197,83.755)
O4': (51.969,145.576,85.872)
C8: (49.805,145.446,87.635)
O2': (53.738,143.141,86.336)
C6: (49.624,145.331,91.144)
C5: (49.846,145.318,89.757)
C4: (51.106,144.943,89.326)
P: (48.392,146.097,83.642)
C4': (51.861,144.679,84.740)
C2': (52.373,143.365,86.620)
C2: (51.810,144.622,91.380)
N1: (50.647,144.970,91.943)
N3: (52.143,144.575,90.097)
N6: (48.469,145.681,91.709)
N7: (49.031,145.625,88.677)
N9: (51.081,145.052,87.955)
O5': (49.552,145.286,84.366)
O3': (51.939,142.313,84.467)
Image (generated by PyMOL):