ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQM:01030:0900

Extra

PDB:
ATOM 1 O3' A A1029 40.821 101.423 90.701 1.00 35.23 O
ATOM 2 P G A1030 40.156 101.805 89.287 1.00 36.73 P
ATOM 3 OP1 G A1030 40.833 100.992 88.236 1.00 32.94 O
ATOM 4 OP2 G A1030 40.146 103.280 89.184 1.00 36.48 O
ATOM 5 O5' G A1030 38.650 101.316 89.426 1.00 38.06 O
ATOM 6 C5' G A1030 37.646 101.679 88.465 1.00 34.14 C
ATOM 7 C4' G A1030 36.576 100.612 88.414 1.00 35.95 C
ATOM 8 O4' G A1030 37.083 99.458 87.699 1.00 34.57 O
ATOM 9 C3' G A1030 36.088 100.089 89.760 1.00 35.91 C
ATOM 10 O3' G A1030 34.716 99.773 89.645 1.00 36.02 O
ATOM 11 C2' G A1030 36.919 98.827 89.945 1.00 36.26 C
ATOM 12 O2' G A1030 36.323 97.870 90.790 1.00 37.69 O
ATOM 13 C1' G A1030 37.006 98.308 88.513 1.00 34.53 C
ATOM 14 N9 G A1030 38.205 97.515 88.258 1.00 36.21 N
ATOM 15 C8 G A1030 39.470 98.005 88.056 1.00 33.53 C
ATOM 16 N7 G A1030 40.350 97.074 87.838 1.00 34.92 N
ATOM 17 C5 G A1030 39.626 95.893 87.899 1.00 34.30 C
ATOM 18 C6 G A1030 40.050 94.552 87.732 1.00 33.71 C
ATOM 19 O6 G A1030 41.183 94.128 87.490 1.00 35.63 O
ATOM 20 N1 G A1030 38.996 93.661 87.873 1.00 33.47 N
ATOM 21 C2 G A1030 37.702 94.013 88.133 1.00 35.10 C
ATOM 22 N2 G A1030 36.828 92.997 88.224 1.00 37.37 N
ATOM 23 N3 G A1030 37.290 95.263 88.289 1.00 35.44 N
ATOM 24 C4 G A1030 38.301 96.144 88.161 1.00 33.59 C
ATOM 25 P G A1031 33.638 100.958 89.640 1.00 36.37 P
ATOM 26 OP1 G A1031 32.873 100.827 88.387 1.00 38.20 O
ATOM 27 OP2 G A1031 34.336 102.240 89.948 1.00 37.71 O
ATOM 28 O5' G A1031 32.701 100.612 90.871 1.00 36.89 O
TER

ATOM 1 O3' A B 899 40.504 88.492 84.447 1.00 39.40 O
ATOM 2 P A B 900 41.546 88.243 85.636 1.00 38.79 P
ATOM 3 OP1 A B 900 41.643 86.774 85.829 1.00 40.53 O
ATOM 4 OP2 A B 900 41.150 89.118 86.772 1.00 38.08 O
ATOM 5 O5' A B 900 42.937 88.742 85.042 1.00 40.21 O
ATOM 6 C5' A B 900 43.485 88.143 83.850 1.00 40.12 C
ATOM 7 C4' A B 900 44.733 88.876 83.423 1.00 39.86 C
ATOM 8 O4' A B 900 44.393 90.207 82.947 1.00 41.67 O
ATOM 9 C3' A B 900 45.717 89.148 84.543 1.00 40.00 C
ATOM 10 O3' A B 900 46.499 88.014 84.864 1.00 36.72 O
ATOM 11 C2' A B 900 46.513 90.318 83.983 1.00 39.09 C
ATOM 12 O2' A B 900 47.404 89.925 82.957 1.00 40.09 O
ATOM 13 C1' A B 900 45.394 91.135 83.348 1.00 37.50 C
ATOM 14 N9 A B 900 44.775 92.076 84.281 1.00 36.75 N
ATOM 15 C8 A B 900 43.618 91.876 84.983 1.00 37.03 C
ATOM 16 N7 A B 900 43.254 92.901 85.709 1.00 36.16 N
ATOM 17 C5 A B 900 44.244 93.837 85.485 1.00 34.40 C
ATOM 18 C6 A B 900 44.424 95.139 85.967 1.00 34.03 C
ATOM 19 N6 A B 900 43.568 95.736 86.796 1.00 33.47 N
ATOM 20 N1 A B 900 45.522 95.814 85.562 1.00 31.24 N
ATOM 21 C2 A B 900 46.372 95.203 84.718 1.00 35.94 C
ATOM 22 N3 A B 900 46.306 93.979 84.188 1.00 36.78 N
ATOM 23 C4 A B 900 45.201 93.340 84.617 1.00 36.65 C
ATOM 24 P A B 901 47.120 87.894 86.330 1.00 37.67 P
ATOM 25 OP1 A B 901 47.794 86.584 86.412 1.00 35.44 O
ATOM 26 OP2 A B 901 46.092 88.247 87.323 1.00 34.25 O
ATOM 27 O5' A B 901 48.197 89.074 86.333 1.00 40.36 O
TER

Atoms:
OP1: (40.833,100.992,88.236)
OP2: (40.146,103.280,89.184)
C3': (36.088,100.089,89.760)
C1': (37.006,98.308,88.513)
C5': (37.646,101.679,88.465)
O6: (41.183,94.128,87.490)
O4': (37.083,99.458,87.699)
C8: (39.470,98.005,88.056)
C2: (37.702,94.013,88.133)
C6: (40.050,94.552,87.732)
C5: (39.626,95.893,87.899)
C4: (38.301,96.144,88.161)
P: (40.156,101.805,89.287)
C4': (36.576,100.612,88.414)
C2': (36.919,98.827,89.945)
O2': (36.323,97.870,90.790)
N1: (38.996,93.661,87.873)
N2: (36.828,92.997,88.224)
N3: (37.290,95.263,88.289)
N7: (40.350,97.074,87.838)
N9: (38.205,97.515,88.258)
O5': (38.650,101.316,89.426)
O3': (34.716,99.773,89.645)
OP1: (41.643,86.774,85.829)
OP2: (41.150,89.118,86.772)
C3': (45.717,89.148,84.543)
C1': (45.394,91.135,83.348)
C5': (43.485,88.143,83.850)
O4': (44.393,90.207,82.947)
C8: (43.618,91.876,84.983)
O2': (47.404,89.925,82.957)
C6: (44.424,95.139,85.967)
C5: (44.244,93.837,85.485)
C4: (45.201,93.340,84.617)
P: (41.546,88.243,85.636)
C4': (44.733,88.876,83.423)
C2': (46.513,90.318,83.983)
C2: (46.372,95.203,84.718)
N1: (45.522,95.814,85.562)
N3: (46.306,93.979,84.188)
N6: (43.568,95.736,86.796)
N7: (43.254,92.901,85.709)
N9: (44.775,92.076,84.281)
O5': (42.937,88.742,85.042)
O3': (46.499,88.014,84.864)
Image (generated by PyMOL):
PyMOL image
show in jmol