Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0200:0215
Extra
PDB:
ATOM 1 O3' U A 199 56.625 89.039 36.202 1.00 35.03 O
ATOM 2 P A A 200 57.491 88.582 37.478 1.00 37.72 P
ATOM 3 OP1 A A 200 58.895 89.031 37.275 1.00 36.64 O
ATOM 4 OP2 A A 200 57.218 87.141 37.718 1.00 37.72 O
ATOM 5 O5' A A 200 56.847 89.409 38.677 1.00 36.84 O
ATOM 6 C5' A A 200 57.042 89.013 40.044 1.00 33.62 C
ATOM 7 C4' A A 200 57.142 90.234 40.926 1.00 35.96 C
ATOM 8 O4' A A 200 58.346 90.976 40.587 1.00 37.48 O
ATOM 9 C3' A A 200 55.998 91.241 40.826 1.00 35.60 C
ATOM 10 O3' A A 200 55.912 91.892 42.083 1.00 36.50 O
ATOM 11 C2' A A 200 56.543 92.245 39.818 1.00 34.61 C
ATOM 12 O2' A A 200 55.951 93.519 39.919 1.00 34.74 O
ATOM 13 C1' A A 200 58.001 92.307 40.257 1.00 36.55 C
ATOM 14 N9 A A 200 58.945 92.807 39.258 1.00 39.31 N
ATOM 15 C8 A A 200 59.506 92.127 38.209 1.00 40.57 C
ATOM 16 N7 A A 200 60.333 92.847 37.495 1.00 42.04 N
ATOM 17 C5 A A 200 60.311 94.090 38.112 1.00 41.92 C
ATOM 18 C6 A A 200 60.979 95.299 37.833 1.00 41.81 C
ATOM 19 N6 A A 200 61.832 95.456 36.818 1.00 41.09 N
ATOM 20 N1 A A 200 60.737 96.351 38.645 1.00 41.26 N
ATOM 21 C2 A A 200 59.889 96.187 39.665 1.00 40.38 C
ATOM 22 N3 A A 200 59.204 95.105 40.029 1.00 40.49 N
ATOM 23 C4 A A 200 59.461 94.080 39.200 1.00 40.26 C
ATOM 24 P G A 201 54.533 91.923 42.894 1.00 37.83 P
ATOM 25 OP1 G A 201 54.161 90.526 43.227 1.00 36.09 O
ATOM 26 OP2 G A 201 53.572 92.787 42.163 1.00 35.34 O
ATOM 27 O5' G A 201 54.953 92.680 44.234 1.00 37.05 O
TER
ATOM 1 O3' A B 214 65.047 98.513 36.261 1.00 33.36 O
ATOM 2 P A B 215 64.134 98.423 34.949 1.00 35.02 P
ATOM 3 OP1 A B 215 64.198 99.754 34.292 1.00 31.86 O
ATOM 4 OP2 A B 215 62.815 97.879 35.341 1.00 34.65 O
ATOM 5 O5' A B 215 64.883 97.332 34.060 1.00 31.50 O
ATOM 6 C5' A B 215 66.238 97.526 33.644 1.00 34.68 C
ATOM 7 C4' A B 215 66.759 96.283 32.965 1.00 38.92 C
ATOM 8 O4' A B 215 66.821 95.204 33.931 1.00 40.31 O
ATOM 9 C3' A B 215 65.919 95.729 31.819 1.00 39.18 C
ATOM 10 O3' A B 215 66.220 96.380 30.583 1.00 38.83 O
ATOM 11 C2' A B 215 66.325 94.262 31.812 1.00 39.86 C
ATOM 12 O2' A B 215 67.580 94.031 31.204 1.00 41.41 O
ATOM 13 C1' A B 215 66.451 93.984 33.311 1.00 40.04 C
ATOM 14 N9 A B 215 65.187 93.550 33.905 1.00 41.78 N
ATOM 15 C8 A B 215 64.257 94.322 34.566 1.00 41.86 C
ATOM 16 N7 A B 215 63.224 93.650 34.999 1.00 40.35 N
ATOM 17 C5 A B 215 63.486 92.347 34.600 1.00 41.22 C
ATOM 18 C6 A B 215 62.778 91.154 34.770 1.00 41.14 C
ATOM 19 N6 A B 215 61.616 91.075 35.422 1.00 39.28 N
ATOM 20 N1 A B 215 63.310 90.029 34.244 1.00 40.50 N
ATOM 21 C2 A B 215 64.476 90.113 33.595 1.00 40.12 C
ATOM 22 N3 A B 215 65.242 91.175 33.377 1.00 40.09 N
ATOM 23 C4 A B 215 64.686 92.273 33.916 1.00 41.13 C
ATOM 24 P C B 216 65.130 96.411 29.405 1.00 39.40 P
ATOM 25 OP1 C B 216 65.639 97.331 28.363 1.00 40.59 O
ATOM 26 OP2 C B 216 63.781 96.634 29.973 1.00 40.50 O
ATOM 27 O5' C B 216 65.161 94.932 28.820 1.00 41.08 O
TER
ATOM 2 P A A 200 57.491 88.582 37.478 1.00 37.72 P
ATOM 3 OP1 A A 200 58.895 89.031 37.275 1.00 36.64 O
ATOM 4 OP2 A A 200 57.218 87.141 37.718 1.00 37.72 O
ATOM 5 O5' A A 200 56.847 89.409 38.677 1.00 36.84 O
ATOM 6 C5' A A 200 57.042 89.013 40.044 1.00 33.62 C
ATOM 7 C4' A A 200 57.142 90.234 40.926 1.00 35.96 C
ATOM 8 O4' A A 200 58.346 90.976 40.587 1.00 37.48 O
ATOM 9 C3' A A 200 55.998 91.241 40.826 1.00 35.60 C
ATOM 10 O3' A A 200 55.912 91.892 42.083 1.00 36.50 O
ATOM 11 C2' A A 200 56.543 92.245 39.818 1.00 34.61 C
ATOM 12 O2' A A 200 55.951 93.519 39.919 1.00 34.74 O
ATOM 13 C1' A A 200 58.001 92.307 40.257 1.00 36.55 C
ATOM 14 N9 A A 200 58.945 92.807 39.258 1.00 39.31 N
ATOM 15 C8 A A 200 59.506 92.127 38.209 1.00 40.57 C
ATOM 16 N7 A A 200 60.333 92.847 37.495 1.00 42.04 N
ATOM 17 C5 A A 200 60.311 94.090 38.112 1.00 41.92 C
ATOM 18 C6 A A 200 60.979 95.299 37.833 1.00 41.81 C
ATOM 19 N6 A A 200 61.832 95.456 36.818 1.00 41.09 N
ATOM 20 N1 A A 200 60.737 96.351 38.645 1.00 41.26 N
ATOM 21 C2 A A 200 59.889 96.187 39.665 1.00 40.38 C
ATOM 22 N3 A A 200 59.204 95.105 40.029 1.00 40.49 N
ATOM 23 C4 A A 200 59.461 94.080 39.200 1.00 40.26 C
ATOM 24 P G A 201 54.533 91.923 42.894 1.00 37.83 P
ATOM 25 OP1 G A 201 54.161 90.526 43.227 1.00 36.09 O
ATOM 26 OP2 G A 201 53.572 92.787 42.163 1.00 35.34 O
ATOM 27 O5' G A 201 54.953 92.680 44.234 1.00 37.05 O
TER
ATOM 1 O3' A B 214 65.047 98.513 36.261 1.00 33.36 O
ATOM 2 P A B 215 64.134 98.423 34.949 1.00 35.02 P
ATOM 3 OP1 A B 215 64.198 99.754 34.292 1.00 31.86 O
ATOM 4 OP2 A B 215 62.815 97.879 35.341 1.00 34.65 O
ATOM 5 O5' A B 215 64.883 97.332 34.060 1.00 31.50 O
ATOM 6 C5' A B 215 66.238 97.526 33.644 1.00 34.68 C
ATOM 7 C4' A B 215 66.759 96.283 32.965 1.00 38.92 C
ATOM 8 O4' A B 215 66.821 95.204 33.931 1.00 40.31 O
ATOM 9 C3' A B 215 65.919 95.729 31.819 1.00 39.18 C
ATOM 10 O3' A B 215 66.220 96.380 30.583 1.00 38.83 O
ATOM 11 C2' A B 215 66.325 94.262 31.812 1.00 39.86 C
ATOM 12 O2' A B 215 67.580 94.031 31.204 1.00 41.41 O
ATOM 13 C1' A B 215 66.451 93.984 33.311 1.00 40.04 C
ATOM 14 N9 A B 215 65.187 93.550 33.905 1.00 41.78 N
ATOM 15 C8 A B 215 64.257 94.322 34.566 1.00 41.86 C
ATOM 16 N7 A B 215 63.224 93.650 34.999 1.00 40.35 N
ATOM 17 C5 A B 215 63.486 92.347 34.600 1.00 41.22 C
ATOM 18 C6 A B 215 62.778 91.154 34.770 1.00 41.14 C
ATOM 19 N6 A B 215 61.616 91.075 35.422 1.00 39.28 N
ATOM 20 N1 A B 215 63.310 90.029 34.244 1.00 40.50 N
ATOM 21 C2 A B 215 64.476 90.113 33.595 1.00 40.12 C
ATOM 22 N3 A B 215 65.242 91.175 33.377 1.00 40.09 N
ATOM 23 C4 A B 215 64.686 92.273 33.916 1.00 41.13 C
ATOM 24 P C B 216 65.130 96.411 29.405 1.00 39.40 P
ATOM 25 OP1 C B 216 65.639 97.331 28.363 1.00 40.59 O
ATOM 26 OP2 C B 216 63.781 96.634 29.973 1.00 40.50 O
ATOM 27 O5' C B 216 65.161 94.932 28.820 1.00 41.08 O
TER
Atoms:
OP1: (58.895,89.031,37.275)
OP2: (57.218,87.141,37.718)
C3': (55.998,91.241,40.826)
C1': (58.001,92.307,40.257)
C5': (57.042,89.013,40.044)
O4': (58.346,90.976,40.587)
C8: (59.506,92.127,38.209)
O2': (55.951,93.519,39.919)
C6: (60.979,95.299,37.833)
C5: (60.311,94.090,38.112)
C4: (59.461,94.080,39.200)
P: (57.491,88.582,37.478)
C4': (57.142,90.234,40.926)
C2': (56.543,92.245,39.818)
C2: (59.889,96.187,39.665)
N1: (60.737,96.351,38.645)
N3: (59.204,95.105,40.029)
N6: (61.832,95.456,36.818)
N7: (60.333,92.847,37.495)
N9: (58.945,92.807,39.258)
O5': (56.847,89.409,38.677)
O3': (55.912,91.892,42.083)
OP2: (57.218,87.141,37.718)
C3': (55.998,91.241,40.826)
C1': (58.001,92.307,40.257)
C5': (57.042,89.013,40.044)
O4': (58.346,90.976,40.587)
C8: (59.506,92.127,38.209)
O2': (55.951,93.519,39.919)
C6: (60.979,95.299,37.833)
C5: (60.311,94.090,38.112)
C4: (59.461,94.080,39.200)
P: (57.491,88.582,37.478)
C4': (57.142,90.234,40.926)
C2': (56.543,92.245,39.818)
C2: (59.889,96.187,39.665)
N1: (60.737,96.351,38.645)
N3: (59.204,95.105,40.029)
N6: (61.832,95.456,36.818)
N7: (60.333,92.847,37.495)
N9: (58.945,92.807,39.258)
O5': (56.847,89.409,38.677)
O3': (55.912,91.892,42.083)
OP1: (64.198,99.754,34.292)
OP2: (62.815,97.879,35.341)
C3': (65.919,95.729,31.819)
C1': (66.451,93.984,33.311)
C5': (66.238,97.526,33.644)
O4': (66.821,95.204,33.931)
C8: (64.257,94.322,34.566)
O2': (67.580,94.031,31.204)
C6: (62.778,91.154,34.770)
C5: (63.486,92.347,34.600)
C4: (64.686,92.273,33.916)
P: (64.134,98.423,34.949)
C4': (66.759,96.283,32.965)
C2': (66.325,94.262,31.812)
C2: (64.476,90.113,33.595)
N1: (63.310,90.029,34.244)
N3: (65.242,91.175,33.377)
N6: (61.616,91.075,35.422)
N7: (63.224,93.650,34.999)
N9: (65.187,93.550,33.905)
O5': (64.883,97.332,34.060)
O3': (66.220,96.380,30.583)
OP2: (62.815,97.879,35.341)
C3': (65.919,95.729,31.819)
C1': (66.451,93.984,33.311)
C5': (66.238,97.526,33.644)
O4': (66.821,95.204,33.931)
C8: (64.257,94.322,34.566)
O2': (67.580,94.031,31.204)
C6: (62.778,91.154,34.770)
C5: (63.486,92.347,34.600)
C4: (64.686,92.273,33.916)
P: (64.134,98.423,34.949)
C4': (66.759,96.283,32.965)
C2': (66.325,94.262,31.812)
C2: (64.476,90.113,33.595)
N1: (63.310,90.029,34.244)
N3: (65.242,91.175,33.377)
N6: (61.616,91.075,35.422)
N7: (63.224,93.650,34.999)
N9: (65.187,93.550,33.905)
O5': (64.883,97.332,34.060)
O3': (66.220,96.380,30.583)
Image (generated by PyMOL):