Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01492:01616
Extra
PDB:
ATOM 1 O3' G A1491 105.593 168.081 55.630 1.00 49.06 O
ATOM 2 P A A1492 105.481 166.964 56.776 1.00 48.96 P
ATOM 3 OP1 A A1492 105.082 165.698 56.103 1.00 48.88 O
ATOM 4 OP2 A A1492 104.640 167.521 57.869 1.00 46.71 O
ATOM 5 O5' A A1492 106.975 166.782 57.303 1.00 46.88 O
ATOM 6 C5' A A1492 107.239 166.223 58.605 1.00 46.34 C
ATOM 7 C4' A A1492 108.558 165.488 58.599 1.00 46.60 C
ATOM 8 O4' A A1492 108.457 164.348 57.704 1.00 44.90 O
ATOM 9 C3' A A1492 109.762 166.297 58.115 1.00 48.10 C
ATOM 10 O3' A A1492 110.950 165.823 58.750 1.00 49.52 O
ATOM 11 C2' A A1492 109.822 165.926 56.637 1.00 47.87 C
ATOM 12 O2' A A1492 111.108 166.104 56.070 1.00 49.61 O
ATOM 13 C1' A A1492 109.446 164.446 56.700 1.00 45.27 C
ATOM 14 N9 A A1492 108.916 163.877 55.460 1.00 42.82 N
ATOM 15 C8 A A1492 107.739 164.163 54.812 1.00 42.70 C
ATOM 16 N7 A A1492 107.558 163.467 53.715 1.00 41.33 N
ATOM 17 C5 A A1492 108.689 162.669 53.635 1.00 40.39 C
ATOM 18 C6 A A1492 109.096 161.693 52.707 1.00 41.35 C
ATOM 19 N6 A A1492 108.379 161.334 51.638 1.00 39.92 N
ATOM 20 N1 A A1492 110.282 161.082 52.922 1.00 43.03 N
ATOM 21 C2 A A1492 110.997 161.427 54.004 1.00 42.75 C
ATOM 22 N3 A A1492 110.715 162.320 54.950 1.00 42.28 N
ATOM 23 C4 A A1492 109.535 162.913 54.703 1.00 41.03 C
ATOM 24 P C A1493 111.409 166.432 60.164 1.00 51.03 P
ATOM 25 OP1 C A1493 110.683 167.706 60.425 1.00 47.61 O
ATOM 26 OP2 C A1493 112.891 166.411 60.158 1.00 51.69 O
ATOM 27 O5' C A1493 110.928 165.349 61.229 1.00 51.06 O
TER
ATOM 1 O3' A B1615 107.733 156.864 50.118 1.00 45.09 O
ATOM 2 P A B1616 108.428 157.956 49.177 1.00 42.96 P
ATOM 3 OP1 A B1616 109.297 157.223 48.217 1.00 42.51 O
ATOM 4 OP2 A B1616 109.007 159.024 50.037 1.00 43.12 O
ATOM 5 O5' A B1616 107.205 158.567 48.369 1.00 41.59 O
ATOM 6 C5' A B1616 106.465 157.762 47.452 1.00 38.61 C
ATOM 7 C4' A B1616 105.121 158.383 47.201 1.00 39.92 C
ATOM 8 O4' A B1616 104.432 158.538 48.470 1.00 39.50 O
ATOM 9 C3' A B1616 105.142 159.794 46.643 1.00 40.07 C
ATOM 10 O3' A B1616 105.372 159.808 45.240 1.00 42.59 O
ATOM 11 C2' A B1616 103.761 160.300 47.038 1.00 38.87 C
ATOM 12 O2' A B1616 102.731 159.764 46.238 1.00 35.65 O
ATOM 13 C1' A B1616 103.641 159.714 48.443 1.00 38.82 C
ATOM 14 N9 A B1616 104.157 160.627 49.461 1.00 39.29 N
ATOM 15 C8 A B1616 105.412 160.653 50.024 1.00 38.67 C
ATOM 16 N7 A B1616 105.567 161.595 50.922 1.00 39.79 N
ATOM 17 C5 A B1616 104.333 162.234 50.952 1.00 39.02 C
ATOM 18 C6 A B1616 103.844 163.316 51.705 1.00 39.37 C
ATOM 19 N6 A B1616 104.570 163.980 52.608 1.00 38.88 N
ATOM 20 N1 A B1616 102.564 163.700 51.495 1.00 39.46 N
ATOM 21 C2 A B1616 101.838 163.039 50.589 1.00 39.32 C
ATOM 22 N3 A B1616 102.185 162.011 49.820 1.00 39.49 N
ATOM 23 C4 A B1616 103.458 161.651 50.054 1.00 38.83 C
ATOM 24 P A B1617 105.951 161.136 44.539 1.00 43.29 P
ATOM 25 OP1 A B1617 106.296 160.770 43.132 1.00 41.12 O
ATOM 26 OP2 A B1617 106.994 161.715 45.430 1.00 39.44 O
ATOM 27 O5' A B1617 104.697 162.120 44.493 1.00 39.94 O
TER
ATOM 2 P A A1492 105.481 166.964 56.776 1.00 48.96 P
ATOM 3 OP1 A A1492 105.082 165.698 56.103 1.00 48.88 O
ATOM 4 OP2 A A1492 104.640 167.521 57.869 1.00 46.71 O
ATOM 5 O5' A A1492 106.975 166.782 57.303 1.00 46.88 O
ATOM 6 C5' A A1492 107.239 166.223 58.605 1.00 46.34 C
ATOM 7 C4' A A1492 108.558 165.488 58.599 1.00 46.60 C
ATOM 8 O4' A A1492 108.457 164.348 57.704 1.00 44.90 O
ATOM 9 C3' A A1492 109.762 166.297 58.115 1.00 48.10 C
ATOM 10 O3' A A1492 110.950 165.823 58.750 1.00 49.52 O
ATOM 11 C2' A A1492 109.822 165.926 56.637 1.00 47.87 C
ATOM 12 O2' A A1492 111.108 166.104 56.070 1.00 49.61 O
ATOM 13 C1' A A1492 109.446 164.446 56.700 1.00 45.27 C
ATOM 14 N9 A A1492 108.916 163.877 55.460 1.00 42.82 N
ATOM 15 C8 A A1492 107.739 164.163 54.812 1.00 42.70 C
ATOM 16 N7 A A1492 107.558 163.467 53.715 1.00 41.33 N
ATOM 17 C5 A A1492 108.689 162.669 53.635 1.00 40.39 C
ATOM 18 C6 A A1492 109.096 161.693 52.707 1.00 41.35 C
ATOM 19 N6 A A1492 108.379 161.334 51.638 1.00 39.92 N
ATOM 20 N1 A A1492 110.282 161.082 52.922 1.00 43.03 N
ATOM 21 C2 A A1492 110.997 161.427 54.004 1.00 42.75 C
ATOM 22 N3 A A1492 110.715 162.320 54.950 1.00 42.28 N
ATOM 23 C4 A A1492 109.535 162.913 54.703 1.00 41.03 C
ATOM 24 P C A1493 111.409 166.432 60.164 1.00 51.03 P
ATOM 25 OP1 C A1493 110.683 167.706 60.425 1.00 47.61 O
ATOM 26 OP2 C A1493 112.891 166.411 60.158 1.00 51.69 O
ATOM 27 O5' C A1493 110.928 165.349 61.229 1.00 51.06 O
TER
ATOM 1 O3' A B1615 107.733 156.864 50.118 1.00 45.09 O
ATOM 2 P A B1616 108.428 157.956 49.177 1.00 42.96 P
ATOM 3 OP1 A B1616 109.297 157.223 48.217 1.00 42.51 O
ATOM 4 OP2 A B1616 109.007 159.024 50.037 1.00 43.12 O
ATOM 5 O5' A B1616 107.205 158.567 48.369 1.00 41.59 O
ATOM 6 C5' A B1616 106.465 157.762 47.452 1.00 38.61 C
ATOM 7 C4' A B1616 105.121 158.383 47.201 1.00 39.92 C
ATOM 8 O4' A B1616 104.432 158.538 48.470 1.00 39.50 O
ATOM 9 C3' A B1616 105.142 159.794 46.643 1.00 40.07 C
ATOM 10 O3' A B1616 105.372 159.808 45.240 1.00 42.59 O
ATOM 11 C2' A B1616 103.761 160.300 47.038 1.00 38.87 C
ATOM 12 O2' A B1616 102.731 159.764 46.238 1.00 35.65 O
ATOM 13 C1' A B1616 103.641 159.714 48.443 1.00 38.82 C
ATOM 14 N9 A B1616 104.157 160.627 49.461 1.00 39.29 N
ATOM 15 C8 A B1616 105.412 160.653 50.024 1.00 38.67 C
ATOM 16 N7 A B1616 105.567 161.595 50.922 1.00 39.79 N
ATOM 17 C5 A B1616 104.333 162.234 50.952 1.00 39.02 C
ATOM 18 C6 A B1616 103.844 163.316 51.705 1.00 39.37 C
ATOM 19 N6 A B1616 104.570 163.980 52.608 1.00 38.88 N
ATOM 20 N1 A B1616 102.564 163.700 51.495 1.00 39.46 N
ATOM 21 C2 A B1616 101.838 163.039 50.589 1.00 39.32 C
ATOM 22 N3 A B1616 102.185 162.011 49.820 1.00 39.49 N
ATOM 23 C4 A B1616 103.458 161.651 50.054 1.00 38.83 C
ATOM 24 P A B1617 105.951 161.136 44.539 1.00 43.29 P
ATOM 25 OP1 A B1617 106.296 160.770 43.132 1.00 41.12 O
ATOM 26 OP2 A B1617 106.994 161.715 45.430 1.00 39.44 O
ATOM 27 O5' A B1617 104.697 162.120 44.493 1.00 39.94 O
TER
Atoms:
OP1: (105.082,165.698,56.103)
OP2: (104.640,167.521,57.869)
C3': (109.762,166.297,58.115)
C1': (109.446,164.446,56.700)
C5': (107.239,166.223,58.605)
O4': (108.457,164.348,57.704)
C8: (107.739,164.163,54.812)
O2': (111.108,166.104,56.070)
C6: (109.096,161.693,52.707)
C5: (108.689,162.669,53.635)
C4: (109.535,162.913,54.703)
P: (105.481,166.964,56.776)
C4': (108.558,165.488,58.599)
C2': (109.822,165.926,56.637)
C2: (110.997,161.427,54.004)
N1: (110.282,161.082,52.922)
N3: (110.715,162.320,54.950)
N6: (108.379,161.334,51.638)
N7: (107.558,163.467,53.715)
N9: (108.916,163.877,55.460)
O5': (106.975,166.782,57.303)
O3': (110.950,165.823,58.750)
OP2: (104.640,167.521,57.869)
C3': (109.762,166.297,58.115)
C1': (109.446,164.446,56.700)
C5': (107.239,166.223,58.605)
O4': (108.457,164.348,57.704)
C8: (107.739,164.163,54.812)
O2': (111.108,166.104,56.070)
C6: (109.096,161.693,52.707)
C5: (108.689,162.669,53.635)
C4: (109.535,162.913,54.703)
P: (105.481,166.964,56.776)
C4': (108.558,165.488,58.599)
C2': (109.822,165.926,56.637)
C2: (110.997,161.427,54.004)
N1: (110.282,161.082,52.922)
N3: (110.715,162.320,54.950)
N6: (108.379,161.334,51.638)
N7: (107.558,163.467,53.715)
N9: (108.916,163.877,55.460)
O5': (106.975,166.782,57.303)
O3': (110.950,165.823,58.750)
OP1: (109.297,157.223,48.217)
OP2: (109.007,159.024,50.037)
C3': (105.142,159.794,46.643)
C1': (103.641,159.714,48.443)
C5': (106.465,157.762,47.452)
O4': (104.432,158.538,48.470)
C8: (105.412,160.653,50.024)
O2': (102.731,159.764,46.238)
C6: (103.844,163.316,51.705)
C5: (104.333,162.234,50.952)
C4: (103.458,161.651,50.054)
P: (108.428,157.956,49.177)
C4': (105.121,158.383,47.201)
C2': (103.761,160.300,47.038)
C2: (101.838,163.039,50.589)
N1: (102.564,163.700,51.495)
N3: (102.185,162.011,49.820)
N6: (104.570,163.980,52.608)
N7: (105.567,161.595,50.922)
N9: (104.157,160.627,49.461)
O5': (107.205,158.567,48.369)
O3': (105.372,159.808,45.240)
OP2: (109.007,159.024,50.037)
C3': (105.142,159.794,46.643)
C1': (103.641,159.714,48.443)
C5': (106.465,157.762,47.452)
O4': (104.432,158.538,48.470)
C8: (105.412,160.653,50.024)
O2': (102.731,159.764,46.238)
C6: (103.844,163.316,51.705)
C5: (104.333,162.234,50.952)
C4: (103.458,161.651,50.054)
P: (108.428,157.956,49.177)
C4': (105.121,158.383,47.201)
C2': (103.761,160.300,47.038)
C2: (101.838,163.039,50.589)
N1: (102.564,163.700,51.495)
N3: (102.185,162.011,49.820)
N6: (104.570,163.980,52.608)
N7: (105.567,161.595,50.922)
N9: (104.157,160.627,49.461)
O5': (107.205,158.567,48.369)
O3': (105.372,159.808,45.240)
Image (generated by PyMOL):