ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3R8T:A370:A401

Extra

PDB:
ATOM 1 O3' G A 369 -17.656 202.352 137.033 1.00 30.04 O
ATOM 2 P A A 370 -17.077 202.405 135.521 1.00 13.79 P
ATOM 3 OP1 A A 370 -15.609 202.567 135.626 1.00 13.79 O
ATOM 4 OP2 A A 370 -17.866 203.409 134.756 1.00 13.79 O
ATOM 5 O5' A A 370 -17.394 200.954 134.987 1.00 13.79 O
ATOM 6 C5' A A 370 -18.725 200.515 134.749 1.00 13.79 C
ATOM 7 C4' A A 370 -18.717 199.514 133.649 1.00 13.79 C
ATOM 8 O4' A A 370 -19.893 199.707 132.820 1.00 13.79 O
ATOM 9 C3' A A 370 -17.533 199.690 132.719 1.00 13.79 C
ATOM 10 O3' A A 370 -17.215 198.444 132.102 1.00 13.79 O
ATOM 11 C2' A A 370 -18.094 200.668 131.704 1.00 13.79 C
ATOM 12 O2' A A 370 -17.372 200.764 130.497 1.00 13.79 O
ATOM 13 C1' A A 370 -19.480 200.075 131.518 1.00 13.79 C
ATOM 14 N9 A A 370 -20.467 200.987 130.963 1.00 13.63 N
ATOM 15 C8 A A 370 -21.202 201.976 131.570 1.00 13.63 C
ATOM 16 N7 A A 370 -22.031 202.592 130.746 1.00 13.63 N
ATOM 17 C5 A A 370 -21.832 201.942 129.527 1.00 13.63 C
ATOM 18 C6 A A 370 -22.408 202.099 128.237 1.00 13.63 C
ATOM 19 N6 A A 370 -23.342 203.004 127.907 1.00 13.63 N
ATOM 20 N1 A A 370 -21.954 201.267 127.261 1.00 13.63 N
ATOM 21 C2 A A 370 -21.006 200.353 127.565 1.00 13.63 C
ATOM 22 N3 A A 370 -20.404 200.103 128.728 1.00 13.63 N
ATOM 23 C4 A A 370 -20.869 200.944 129.665 1.00 13.63 C
ATOM 24 P G A 371 -15.707 197.899 132.173 1.00 39.87 P
ATOM 25 OP1 G A 371 -15.072 198.546 133.352 1.00 39.87 O
ATOM 26 OP2 G A 371 -15.106 198.109 130.833 1.00 39.87 O
ATOM 27 O5' G A 371 -15.885 196.339 132.442 1.00 39.87 O
TER

ATOM 1 O3' A B 400 -26.038 203.703 125.180 1.00 22.40 O
ATOM 2 P A B 401 -25.393 205.147 125.434 1.00 37.14 P
ATOM 3 OP1 A B 401 -25.479 205.887 124.150 1.00 37.14 O
ATOM 4 OP2 A B 401 -24.054 204.937 126.062 1.00 37.14 O
ATOM 5 O5' A B 401 -26.395 205.797 126.478 1.00 37.14 O
ATOM 6 C5' A B 401 -27.670 206.265 126.060 1.00 37.14 C
ATOM 7 C4' A B 401 -28.384 206.946 127.189 1.00 37.14 C
ATOM 8 O4' A B 401 -28.586 205.990 128.266 1.00 37.14 O
ATOM 9 C3' A B 401 -27.625 208.104 127.838 1.00 37.14 C
ATOM 10 O3' A B 401 -27.804 209.347 127.166 1.00 37.14 O
ATOM 11 C2' A B 401 -28.138 208.091 129.273 1.00 37.14 C
ATOM 12 O2' A B 401 -29.404 208.730 129.381 1.00 37.14 O
ATOM 13 C1' A B 401 -28.310 206.591 129.511 1.00 37.14 C
ATOM 14 N9 A B 401 -27.079 205.992 130.047 1.00 36.40 N
ATOM 15 C8 A B 401 -26.045 205.427 129.363 1.00 36.40 C
ATOM 16 N7 A B 401 -25.086 205.009 130.145 1.00 36.40 N
ATOM 17 C5 A B 401 -25.513 205.334 131.418 1.00 36.40 C
ATOM 18 C6 A B 401 -24.952 205.171 132.686 1.00 36.40 C
ATOM 19 N6 A B 401 -23.779 204.599 132.938 1.00 36.40 N
ATOM 20 N1 A B 401 -25.650 205.620 133.737 1.00 36.40 N
ATOM 21 C2 A B 401 -26.834 206.200 133.536 1.00 36.40 C
ATOM 22 N3 A B 401 -27.465 206.410 132.393 1.00 36.40 N
ATOM 23 C4 A B 401 -26.739 205.944 131.367 1.00 36.40 C
ATOM 24 P U B 402 -26.559 210.362 126.987 1.00 53.55 P
ATOM 25 OP1 U B 402 -27.122 211.676 126.584 1.00 53.55 O
ATOM 26 OP2 U B 402 -25.574 209.704 126.094 1.00 53.55 O
ATOM 27 O5' U B 402 -25.975 210.454 128.461 1.00 53.55 O
TER

Atoms:
OP1: (-15.609,202.567,135.626)
OP2: (-17.866,203.409,134.756)
C3': (-17.533,199.690,132.719)
C1': (-19.480,200.075,131.518)
C5': (-18.725,200.515,134.749)
O4': (-19.893,199.707,132.820)
C8: (-21.202,201.976,131.570)
O2': (-17.372,200.764,130.497)
C6: (-22.408,202.099,128.237)
C5: (-21.832,201.942,129.527)
C4: (-20.869,200.944,129.665)
P: (-17.077,202.405,135.521)
C4': (-18.717,199.514,133.649)
C2': (-18.094,200.668,131.704)
C2: (-21.006,200.353,127.565)
N1: (-21.954,201.267,127.261)
N3: (-20.404,200.103,128.728)
N6: (-23.342,203.004,127.907)
N7: (-22.031,202.592,130.746)
N9: (-20.467,200.987,130.963)
O5': (-17.394,200.954,134.987)
O3': (-17.215,198.444,132.102)
OP1: (-25.479,205.887,124.150)
OP2: (-24.054,204.937,126.062)
C3': (-27.625,208.104,127.838)
C1': (-28.310,206.591,129.511)
C5': (-27.670,206.265,126.060)
O4': (-28.586,205.990,128.266)
C8: (-26.045,205.427,129.363)
O2': (-29.404,208.730,129.381)
C6: (-24.952,205.171,132.686)
C5: (-25.513,205.334,131.418)
C4: (-26.739,205.944,131.367)
P: (-25.393,205.147,125.434)
C4': (-28.384,206.946,127.189)
C2': (-28.138,208.091,129.273)
C2: (-26.834,206.200,133.536)
N1: (-25.650,205.620,133.737)
N3: (-27.465,206.410,132.393)
N6: (-23.779,204.599,132.938)
N7: (-25.086,205.009,130.145)
N9: (-27.079,205.992,130.047)
O5': (-26.395,205.797,126.478)
O3': (-27.804,209.347,127.166)
Image (generated by PyMOL):
PyMOL image
show in jmol