Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A38:A104
Extra
PDB:
ATOM 1 O3' G A 37 69.171 146.699 28.901 1.00 52.25 O
ATOM 2 P A A 38 67.875 147.335 29.568 1.00 52.01 P
ATOM 3 OP1 A A 38 67.269 148.219 28.529 1.00 53.08 O
ATOM 4 OP2 A A 38 68.353 147.931 30.839 1.00 52.44 O
ATOM 5 O5' A A 38 66.909 146.085 29.820 1.00 49.77 O
ATOM 6 C5' A A 38 66.289 145.386 28.709 1.00 46.95 C
ATOM 7 C4' A A 38 66.156 143.910 29.010 1.00 45.29 C
ATOM 8 O4' A A 38 67.449 143.254 29.032 1.00 45.63 O
ATOM 9 C3' A A 38 65.554 143.617 30.365 1.00 44.82 C
ATOM 10 O3' A A 38 64.155 143.623 30.280 1.00 43.00 O
ATOM 11 C2' A A 38 66.062 142.225 30.678 1.00 45.08 C
ATOM 12 O2' A A 38 65.268 141.255 30.041 1.00 45.49 O
ATOM 13 C1' A A 38 67.461 142.267 30.058 1.00 45.34 C
ATOM 14 N9 A A 38 68.532 142.609 30.999 1.00 45.63 N
ATOM 15 C8 A A 38 69.259 143.771 30.999 1.00 45.76 C
ATOM 16 N7 A A 38 70.199 143.807 31.907 1.00 46.82 N
ATOM 17 C5 A A 38 70.083 142.590 32.562 1.00 45.77 C
ATOM 18 C6 A A 38 70.805 142.015 33.621 1.00 45.37 C
ATOM 19 N6 A A 38 71.845 142.614 34.209 1.00 46.02 N
ATOM 20 N1 A A 38 70.424 140.791 34.053 1.00 45.06 N
ATOM 21 C2 A A 38 69.394 140.193 33.445 1.00 45.60 C
ATOM 22 N3 A A 38 68.644 140.627 32.430 1.00 46.01 N
ATOM 23 C4 A A 38 69.045 141.847 32.029 1.00 45.81 C
ATOM 24 P A A 39 63.317 144.335 31.425 1.00 43.87 P
ATOM 25 OP1 A A 39 61.910 144.367 30.986 1.00 43.25 O
ATOM 26 OP2 A A 39 64.045 145.605 31.705 1.00 44.24 O
ATOM 27 O5' A A 39 63.455 143.336 32.650 1.00 43.11 O
TER
ATOM 1 O3' A B 103 78.274 141.586 36.086 1.00 42.29 O
ATOM 2 P A B 104 79.762 142.092 35.692 1.00 43.54 P
ATOM 3 OP1 A B 104 80.322 141.136 34.686 1.00 43.34 O
ATOM 4 OP2 A B 104 80.571 142.405 36.912 1.00 43.75 O
ATOM 5 O5' A B 104 79.483 143.440 34.896 1.00 42.62 O
ATOM 6 C5' A B 104 78.931 144.598 35.534 1.00 44.08 C
ATOM 7 C4' A B 104 78.974 145.755 34.564 1.00 45.13 C
ATOM 8 O4' A B 104 77.871 145.634 33.623 1.00 45.71 O
ATOM 9 C3' A B 104 78.876 147.155 35.159 1.00 45.32 C
ATOM 10 O3' A B 104 79.563 148.080 34.292 1.00 45.30 O
ATOM 11 C2' A B 104 77.386 147.445 35.027 1.00 45.53 C
ATOM 12 O2' A B 104 77.146 148.831 34.988 1.00 46.74 O
ATOM 13 C1' A B 104 77.090 146.810 33.667 1.00 46.09 C
ATOM 14 N9 A B 104 75.693 146.465 33.380 1.00 46.48 N
ATOM 15 C8 A B 104 74.883 145.531 33.977 1.00 46.94 C
ATOM 16 N7 A B 104 73.679 145.473 33.462 1.00 48.31 N
ATOM 17 C5 A B 104 73.689 146.440 32.470 1.00 47.55 C
ATOM 18 C6 A B 104 72.690 146.894 31.569 1.00 47.77 C
ATOM 19 N6 A B 104 71.444 146.421 31.525 1.00 48.06 N
ATOM 20 N1 A B 104 73.022 147.871 30.709 1.00 48.02 N
ATOM 21 C2 A B 104 74.269 148.360 30.753 1.00 49.40 C
ATOM 22 N3 A B 104 75.290 148.023 31.555 1.00 49.09 N
ATOM 23 C4 A B 104 74.925 147.050 32.401 1.00 47.42 C
ATOM 24 P U B 105 81.178 148.150 34.257 1.00 45.56 P
ATOM 25 OP1 U B 105 81.803 146.928 34.827 1.00 43.70 O
ATOM 26 OP2 U B 105 81.569 149.486 34.773 1.00 45.81 O
ATOM 27 O5' U B 105 81.510 148.147 32.702 1.00 47.86 O
TER
ATOM 2 P A A 38 67.875 147.335 29.568 1.00 52.01 P
ATOM 3 OP1 A A 38 67.269 148.219 28.529 1.00 53.08 O
ATOM 4 OP2 A A 38 68.353 147.931 30.839 1.00 52.44 O
ATOM 5 O5' A A 38 66.909 146.085 29.820 1.00 49.77 O
ATOM 6 C5' A A 38 66.289 145.386 28.709 1.00 46.95 C
ATOM 7 C4' A A 38 66.156 143.910 29.010 1.00 45.29 C
ATOM 8 O4' A A 38 67.449 143.254 29.032 1.00 45.63 O
ATOM 9 C3' A A 38 65.554 143.617 30.365 1.00 44.82 C
ATOM 10 O3' A A 38 64.155 143.623 30.280 1.00 43.00 O
ATOM 11 C2' A A 38 66.062 142.225 30.678 1.00 45.08 C
ATOM 12 O2' A A 38 65.268 141.255 30.041 1.00 45.49 O
ATOM 13 C1' A A 38 67.461 142.267 30.058 1.00 45.34 C
ATOM 14 N9 A A 38 68.532 142.609 30.999 1.00 45.63 N
ATOM 15 C8 A A 38 69.259 143.771 30.999 1.00 45.76 C
ATOM 16 N7 A A 38 70.199 143.807 31.907 1.00 46.82 N
ATOM 17 C5 A A 38 70.083 142.590 32.562 1.00 45.77 C
ATOM 18 C6 A A 38 70.805 142.015 33.621 1.00 45.37 C
ATOM 19 N6 A A 38 71.845 142.614 34.209 1.00 46.02 N
ATOM 20 N1 A A 38 70.424 140.791 34.053 1.00 45.06 N
ATOM 21 C2 A A 38 69.394 140.193 33.445 1.00 45.60 C
ATOM 22 N3 A A 38 68.644 140.627 32.430 1.00 46.01 N
ATOM 23 C4 A A 38 69.045 141.847 32.029 1.00 45.81 C
ATOM 24 P A A 39 63.317 144.335 31.425 1.00 43.87 P
ATOM 25 OP1 A A 39 61.910 144.367 30.986 1.00 43.25 O
ATOM 26 OP2 A A 39 64.045 145.605 31.705 1.00 44.24 O
ATOM 27 O5' A A 39 63.455 143.336 32.650 1.00 43.11 O
TER
ATOM 1 O3' A B 103 78.274 141.586 36.086 1.00 42.29 O
ATOM 2 P A B 104 79.762 142.092 35.692 1.00 43.54 P
ATOM 3 OP1 A B 104 80.322 141.136 34.686 1.00 43.34 O
ATOM 4 OP2 A B 104 80.571 142.405 36.912 1.00 43.75 O
ATOM 5 O5' A B 104 79.483 143.440 34.896 1.00 42.62 O
ATOM 6 C5' A B 104 78.931 144.598 35.534 1.00 44.08 C
ATOM 7 C4' A B 104 78.974 145.755 34.564 1.00 45.13 C
ATOM 8 O4' A B 104 77.871 145.634 33.623 1.00 45.71 O
ATOM 9 C3' A B 104 78.876 147.155 35.159 1.00 45.32 C
ATOM 10 O3' A B 104 79.563 148.080 34.292 1.00 45.30 O
ATOM 11 C2' A B 104 77.386 147.445 35.027 1.00 45.53 C
ATOM 12 O2' A B 104 77.146 148.831 34.988 1.00 46.74 O
ATOM 13 C1' A B 104 77.090 146.810 33.667 1.00 46.09 C
ATOM 14 N9 A B 104 75.693 146.465 33.380 1.00 46.48 N
ATOM 15 C8 A B 104 74.883 145.531 33.977 1.00 46.94 C
ATOM 16 N7 A B 104 73.679 145.473 33.462 1.00 48.31 N
ATOM 17 C5 A B 104 73.689 146.440 32.470 1.00 47.55 C
ATOM 18 C6 A B 104 72.690 146.894 31.569 1.00 47.77 C
ATOM 19 N6 A B 104 71.444 146.421 31.525 1.00 48.06 N
ATOM 20 N1 A B 104 73.022 147.871 30.709 1.00 48.02 N
ATOM 21 C2 A B 104 74.269 148.360 30.753 1.00 49.40 C
ATOM 22 N3 A B 104 75.290 148.023 31.555 1.00 49.09 N
ATOM 23 C4 A B 104 74.925 147.050 32.401 1.00 47.42 C
ATOM 24 P U B 105 81.178 148.150 34.257 1.00 45.56 P
ATOM 25 OP1 U B 105 81.803 146.928 34.827 1.00 43.70 O
ATOM 26 OP2 U B 105 81.569 149.486 34.773 1.00 45.81 O
ATOM 27 O5' U B 105 81.510 148.147 32.702 1.00 47.86 O
TER
Atoms:
OP1: (67.269,148.219,28.529)
OP2: (68.353,147.931,30.839)
C3': (65.554,143.617,30.365)
C1': (67.461,142.267,30.058)
C5': (66.289,145.386,28.709)
O4': (67.449,143.254,29.032)
C8: (69.259,143.771,30.999)
O2': (65.268,141.255,30.041)
C6: (70.805,142.015,33.621)
C5: (70.083,142.590,32.562)
C4: (69.045,141.847,32.029)
P: (67.875,147.335,29.568)
C4': (66.156,143.910,29.010)
C2': (66.062,142.225,30.678)
C2: (69.394,140.193,33.445)
N1: (70.424,140.791,34.053)
N3: (68.644,140.627,32.430)
N6: (71.845,142.614,34.209)
N7: (70.199,143.807,31.907)
N9: (68.532,142.609,30.999)
O5': (66.909,146.085,29.820)
O3': (64.155,143.623,30.280)
OP2: (68.353,147.931,30.839)
C3': (65.554,143.617,30.365)
C1': (67.461,142.267,30.058)
C5': (66.289,145.386,28.709)
O4': (67.449,143.254,29.032)
C8: (69.259,143.771,30.999)
O2': (65.268,141.255,30.041)
C6: (70.805,142.015,33.621)
C5: (70.083,142.590,32.562)
C4: (69.045,141.847,32.029)
P: (67.875,147.335,29.568)
C4': (66.156,143.910,29.010)
C2': (66.062,142.225,30.678)
C2: (69.394,140.193,33.445)
N1: (70.424,140.791,34.053)
N3: (68.644,140.627,32.430)
N6: (71.845,142.614,34.209)
N7: (70.199,143.807,31.907)
N9: (68.532,142.609,30.999)
O5': (66.909,146.085,29.820)
O3': (64.155,143.623,30.280)
OP1: (80.322,141.136,34.686)
OP2: (80.571,142.405,36.912)
C3': (78.876,147.155,35.159)
C1': (77.090,146.810,33.667)
C5': (78.931,144.598,35.534)
O4': (77.871,145.634,33.623)
C8: (74.883,145.531,33.977)
O2': (77.146,148.831,34.988)
C6: (72.690,146.894,31.569)
C5: (73.689,146.440,32.470)
C4: (74.925,147.050,32.401)
P: (79.762,142.092,35.692)
C4': (78.974,145.755,34.564)
C2': (77.386,147.445,35.027)
C2: (74.269,148.360,30.753)
N1: (73.022,147.871,30.709)
N3: (75.290,148.023,31.555)
N6: (71.444,146.421,31.525)
N7: (73.679,145.473,33.462)
N9: (75.693,146.465,33.380)
O5': (79.483,143.440,34.896)
O3': (79.563,148.080,34.292)
OP2: (80.571,142.405,36.912)
C3': (78.876,147.155,35.159)
C1': (77.090,146.810,33.667)
C5': (78.931,144.598,35.534)
O4': (77.871,145.634,33.623)
C8: (74.883,145.531,33.977)
O2': (77.146,148.831,34.988)
C6: (72.690,146.894,31.569)
C5: (73.689,146.440,32.470)
C4: (74.925,147.050,32.401)
P: (79.762,142.092,35.692)
C4': (78.974,145.755,34.564)
C2': (77.386,147.445,35.027)
C2: (74.269,148.360,30.753)
N1: (73.022,147.871,30.709)
N3: (75.290,148.023,31.555)
N6: (71.444,146.421,31.525)
N7: (73.679,145.473,33.462)
N9: (75.693,146.465,33.380)
O5': (79.483,143.440,34.896)
O3': (79.563,148.080,34.292)
Image (generated by PyMOL):