Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01328:02001
Extra
PDB:
ATOM 1 O3' U A1327 44.499 144.626 94.461 1.00 36.42 O
ATOM 2 P A A1328 45.097 146.047 94.907 1.00 36.76 P
ATOM 3 OP1 A A1328 46.282 146.325 94.078 1.00 39.07 O
ATOM 4 OP2 A A1328 45.217 146.054 96.387 1.00 35.45 O
ATOM 5 O5' A A1328 43.986 147.093 94.485 1.00 36.84 O
ATOM 6 C5' A A1328 43.880 148.352 95.156 1.00 37.23 C
ATOM 7 C4' A A1328 43.312 149.376 94.217 1.00 36.63 C
ATOM 8 O4' A A1328 44.224 149.498 93.095 1.00 37.03 O
ATOM 9 C3' A A1328 41.950 149.042 93.614 1.00 34.90 C
ATOM 10 O3' A A1328 41.332 150.276 93.282 1.00 35.11 O
ATOM 11 C2' A A1328 42.345 148.337 92.325 1.00 35.71 C
ATOM 12 O2' A A1328 41.325 148.359 91.350 1.00 36.36 O
ATOM 13 C1' A A1328 43.547 149.182 91.904 1.00 35.25 C
ATOM 14 N9 A A1328 44.484 148.505 91.026 1.00 32.90 N
ATOM 15 C8 A A1328 45.346 147.494 91.334 1.00 33.37 C
ATOM 16 N7 A A1328 46.033 147.060 90.310 1.00 35.39 N
ATOM 17 C5 A A1328 45.591 147.845 89.257 1.00 34.81 C
ATOM 18 C6 A A1328 45.913 147.865 87.893 1.00 34.91 C
ATOM 19 N6 A A1328 46.767 147.017 87.329 1.00 36.77 N
ATOM 20 N1 A A1328 45.309 148.788 87.115 1.00 34.69 N
ATOM 21 C2 A A1328 44.428 149.616 87.681 1.00 34.27 C
ATOM 22 N3 A A1328 44.029 149.683 88.948 1.00 34.38 N
ATOM 23 C4 A A1328 44.656 148.756 89.691 1.00 34.07 C
ATOM 24 P G A1329 39.788 150.531 93.608 1.00 35.22 P
ATOM 25 OP1 G A1329 39.499 150.214 95.025 1.00 33.04 O
ATOM 26 OP2 G A1329 39.023 149.860 92.547 1.00 36.70 O
ATOM 27 O5' G A1329 39.644 152.102 93.365 1.00 36.22 O
TER
ATOM 1 O3' A B2000 49.126 147.532 83.304 1.00 35.68 O
ATOM 2 P A B2001 48.467 146.096 83.559 1.00 35.67 P
ATOM 3 OP1 A B2001 48.185 145.492 82.226 1.00 33.72 O
ATOM 4 OP2 A B2001 47.364 146.273 84.533 1.00 35.22 O
ATOM 5 O5' A B2001 49.637 145.284 84.260 1.00 33.25 O
ATOM 6 C5' A B2001 50.932 145.247 83.662 1.00 32.28 C
ATOM 7 C4' A B2001 51.939 144.742 84.646 1.00 30.43 C
ATOM 8 O4' A B2001 52.010 145.645 85.772 1.00 28.54 O
ATOM 9 C3' A B2001 51.625 143.397 85.264 1.00 29.65 C
ATOM 10 O3' A B2001 52.033 142.360 84.380 1.00 31.14 O
ATOM 11 C2' A B2001 52.464 143.448 86.530 1.00 29.19 C
ATOM 12 O2' A B2001 53.831 143.227 86.253 1.00 28.03 O
ATOM 13 C1' A B2001 52.283 144.910 86.947 1.00 28.90 C
ATOM 14 N9 A B2001 51.176 145.135 87.874 1.00 30.67 N
ATOM 15 C8 A B2001 49.914 145.563 87.557 1.00 32.22 C
ATOM 16 N7 A B2001 49.128 145.705 88.595 1.00 32.70 N
ATOM 17 C5 A B2001 49.925 145.341 89.668 1.00 31.19 C
ATOM 18 C6 A B2001 49.679 145.286 91.043 1.00 32.21 C
ATOM 19 N6 A B2001 48.511 145.624 91.604 1.00 31.90 N
ATOM 20 N1 A B2001 50.682 144.873 91.838 1.00 31.43 N
ATOM 21 C2 A B2001 51.847 144.551 91.281 1.00 30.47 C
ATOM 22 N3 A B2001 52.202 144.569 90.006 1.00 30.60 N
ATOM 23 C4 A B2001 51.184 144.977 89.239 1.00 30.48 C
ATOM 24 P C B2002 51.452 140.872 84.558 1.00 33.23 P
ATOM 25 OP1 C B2002 52.109 140.048 83.509 1.00 31.20 O
ATOM 26 OP2 C B2002 49.970 140.930 84.627 1.00 33.60 O
ATOM 27 O5' C B2002 51.993 140.391 85.976 1.00 31.21 O
TER
ATOM 2 P A A1328 45.097 146.047 94.907 1.00 36.76 P
ATOM 3 OP1 A A1328 46.282 146.325 94.078 1.00 39.07 O
ATOM 4 OP2 A A1328 45.217 146.054 96.387 1.00 35.45 O
ATOM 5 O5' A A1328 43.986 147.093 94.485 1.00 36.84 O
ATOM 6 C5' A A1328 43.880 148.352 95.156 1.00 37.23 C
ATOM 7 C4' A A1328 43.312 149.376 94.217 1.00 36.63 C
ATOM 8 O4' A A1328 44.224 149.498 93.095 1.00 37.03 O
ATOM 9 C3' A A1328 41.950 149.042 93.614 1.00 34.90 C
ATOM 10 O3' A A1328 41.332 150.276 93.282 1.00 35.11 O
ATOM 11 C2' A A1328 42.345 148.337 92.325 1.00 35.71 C
ATOM 12 O2' A A1328 41.325 148.359 91.350 1.00 36.36 O
ATOM 13 C1' A A1328 43.547 149.182 91.904 1.00 35.25 C
ATOM 14 N9 A A1328 44.484 148.505 91.026 1.00 32.90 N
ATOM 15 C8 A A1328 45.346 147.494 91.334 1.00 33.37 C
ATOM 16 N7 A A1328 46.033 147.060 90.310 1.00 35.39 N
ATOM 17 C5 A A1328 45.591 147.845 89.257 1.00 34.81 C
ATOM 18 C6 A A1328 45.913 147.865 87.893 1.00 34.91 C
ATOM 19 N6 A A1328 46.767 147.017 87.329 1.00 36.77 N
ATOM 20 N1 A A1328 45.309 148.788 87.115 1.00 34.69 N
ATOM 21 C2 A A1328 44.428 149.616 87.681 1.00 34.27 C
ATOM 22 N3 A A1328 44.029 149.683 88.948 1.00 34.38 N
ATOM 23 C4 A A1328 44.656 148.756 89.691 1.00 34.07 C
ATOM 24 P G A1329 39.788 150.531 93.608 1.00 35.22 P
ATOM 25 OP1 G A1329 39.499 150.214 95.025 1.00 33.04 O
ATOM 26 OP2 G A1329 39.023 149.860 92.547 1.00 36.70 O
ATOM 27 O5' G A1329 39.644 152.102 93.365 1.00 36.22 O
TER
ATOM 1 O3' A B2000 49.126 147.532 83.304 1.00 35.68 O
ATOM 2 P A B2001 48.467 146.096 83.559 1.00 35.67 P
ATOM 3 OP1 A B2001 48.185 145.492 82.226 1.00 33.72 O
ATOM 4 OP2 A B2001 47.364 146.273 84.533 1.00 35.22 O
ATOM 5 O5' A B2001 49.637 145.284 84.260 1.00 33.25 O
ATOM 6 C5' A B2001 50.932 145.247 83.662 1.00 32.28 C
ATOM 7 C4' A B2001 51.939 144.742 84.646 1.00 30.43 C
ATOM 8 O4' A B2001 52.010 145.645 85.772 1.00 28.54 O
ATOM 9 C3' A B2001 51.625 143.397 85.264 1.00 29.65 C
ATOM 10 O3' A B2001 52.033 142.360 84.380 1.00 31.14 O
ATOM 11 C2' A B2001 52.464 143.448 86.530 1.00 29.19 C
ATOM 12 O2' A B2001 53.831 143.227 86.253 1.00 28.03 O
ATOM 13 C1' A B2001 52.283 144.910 86.947 1.00 28.90 C
ATOM 14 N9 A B2001 51.176 145.135 87.874 1.00 30.67 N
ATOM 15 C8 A B2001 49.914 145.563 87.557 1.00 32.22 C
ATOM 16 N7 A B2001 49.128 145.705 88.595 1.00 32.70 N
ATOM 17 C5 A B2001 49.925 145.341 89.668 1.00 31.19 C
ATOM 18 C6 A B2001 49.679 145.286 91.043 1.00 32.21 C
ATOM 19 N6 A B2001 48.511 145.624 91.604 1.00 31.90 N
ATOM 20 N1 A B2001 50.682 144.873 91.838 1.00 31.43 N
ATOM 21 C2 A B2001 51.847 144.551 91.281 1.00 30.47 C
ATOM 22 N3 A B2001 52.202 144.569 90.006 1.00 30.60 N
ATOM 23 C4 A B2001 51.184 144.977 89.239 1.00 30.48 C
ATOM 24 P C B2002 51.452 140.872 84.558 1.00 33.23 P
ATOM 25 OP1 C B2002 52.109 140.048 83.509 1.00 31.20 O
ATOM 26 OP2 C B2002 49.970 140.930 84.627 1.00 33.60 O
ATOM 27 O5' C B2002 51.993 140.391 85.976 1.00 31.21 O
TER
Atoms:
OP1: (46.282,146.325,94.078)
OP2: (45.217,146.054,96.387)
C3': (41.950,149.042,93.614)
C1': (43.547,149.182,91.904)
C5': (43.880,148.352,95.156)
O4': (44.224,149.498,93.095)
C8: (45.346,147.494,91.334)
O2': (41.325,148.359,91.350)
C6: (45.913,147.865,87.893)
C5: (45.591,147.845,89.257)
C4: (44.656,148.756,89.691)
P: (45.097,146.047,94.907)
C4': (43.312,149.376,94.217)
C2': (42.345,148.337,92.325)
C2: (44.428,149.616,87.681)
N1: (45.309,148.788,87.115)
N3: (44.029,149.683,88.948)
N6: (46.767,147.017,87.329)
N7: (46.033,147.060,90.310)
N9: (44.484,148.505,91.026)
O5': (43.986,147.093,94.485)
O3': (41.332,150.276,93.282)
OP2: (45.217,146.054,96.387)
C3': (41.950,149.042,93.614)
C1': (43.547,149.182,91.904)
C5': (43.880,148.352,95.156)
O4': (44.224,149.498,93.095)
C8: (45.346,147.494,91.334)
O2': (41.325,148.359,91.350)
C6: (45.913,147.865,87.893)
C5: (45.591,147.845,89.257)
C4: (44.656,148.756,89.691)
P: (45.097,146.047,94.907)
C4': (43.312,149.376,94.217)
C2': (42.345,148.337,92.325)
C2: (44.428,149.616,87.681)
N1: (45.309,148.788,87.115)
N3: (44.029,149.683,88.948)
N6: (46.767,147.017,87.329)
N7: (46.033,147.060,90.310)
N9: (44.484,148.505,91.026)
O5': (43.986,147.093,94.485)
O3': (41.332,150.276,93.282)
OP1: (48.185,145.492,82.226)
OP2: (47.364,146.273,84.533)
C3': (51.625,143.397,85.264)
C1': (52.283,144.910,86.947)
C5': (50.932,145.247,83.662)
O4': (52.010,145.645,85.772)
C8: (49.914,145.563,87.557)
O2': (53.831,143.227,86.253)
C6: (49.679,145.286,91.043)
C5: (49.925,145.341,89.668)
C4: (51.184,144.977,89.239)
P: (48.467,146.096,83.559)
C4': (51.939,144.742,84.646)
C2': (52.464,143.448,86.530)
C2: (51.847,144.551,91.281)
N1: (50.682,144.873,91.838)
N3: (52.202,144.569,90.006)
N6: (48.511,145.624,91.604)
N7: (49.128,145.705,88.595)
N9: (51.176,145.135,87.874)
O5': (49.637,145.284,84.260)
O3': (52.033,142.360,84.380)
OP2: (47.364,146.273,84.533)
C3': (51.625,143.397,85.264)
C1': (52.283,144.910,86.947)
C5': (50.932,145.247,83.662)
O4': (52.010,145.645,85.772)
C8: (49.914,145.563,87.557)
O2': (53.831,143.227,86.253)
C6: (49.679,145.286,91.043)
C5: (49.925,145.341,89.668)
C4: (51.184,144.977,89.239)
P: (48.467,146.096,83.559)
C4': (51.939,144.742,84.646)
C2': (52.464,143.448,86.530)
C2: (51.847,144.551,91.281)
N1: (50.682,144.873,91.838)
N3: (52.202,144.569,90.006)
N6: (48.511,145.624,91.604)
N7: (49.128,145.705,88.595)
N9: (51.176,145.135,87.874)
O5': (49.637,145.284,84.260)
O3': (52.033,142.360,84.380)
Image (generated by PyMOL):