Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:B76:B103
Extra
PDB:
ATOM 1 O3' G A 75 45.194 61.711 128.888 1.00 59.43 O
ATOM 2 P A A 76 45.190 63.041 127.974 1.00 61.88 P
ATOM 3 OP1 A A 76 45.756 62.626 126.667 1.00 60.94 O
ATOM 4 OP2 A A 76 45.830 64.137 128.742 1.00 64.14 O
ATOM 5 O5' A A 76 43.664 63.452 127.783 1.00 61.10 O
ATOM 6 C5' A A 76 42.660 62.460 127.692 1.00 60.50 C
ATOM 7 C4' A A 76 41.764 62.722 126.513 1.00 59.13 C
ATOM 8 O4' A A 76 42.541 62.794 125.283 1.00 58.45 O
ATOM 9 C3' A A 76 40.777 61.590 126.309 1.00 59.69 C
ATOM 10 O3' A A 76 39.587 62.106 125.759 1.00 61.59 O
ATOM 11 C2' A A 76 41.479 60.720 125.283 1.00 59.56 C
ATOM 12 O2' A A 76 40.547 59.892 124.621 1.00 59.82 O
ATOM 13 C1' A A 76 42.099 61.792 124.383 1.00 58.81 C
ATOM 14 N9 A A 76 43.226 61.354 123.534 1.00 57.81 N
ATOM 15 C8 A A 76 44.581 61.440 123.763 1.00 56.99 C
ATOM 16 N7 A A 76 45.315 60.912 122.811 1.00 56.68 N
ATOM 17 C5 A A 76 44.386 60.449 121.891 1.00 56.68 C
ATOM 18 C6 A A 76 44.515 59.764 120.653 1.00 57.44 C
ATOM 19 N6 A A 76 45.681 59.370 120.130 1.00 57.91 N
ATOM 20 N1 A A 76 43.377 59.481 119.971 1.00 57.08 N
ATOM 21 C2 A A 76 42.206 59.841 120.510 1.00 56.51 C
ATOM 22 N3 A A 76 41.961 60.455 121.659 1.00 56.05 N
ATOM 23 C4 A A 76 43.100 60.734 122.311 1.00 56.39 C
ATOM 24 P G A 77 38.178 61.772 126.452 1.00 63.37 P
ATOM 25 OP1 G A 77 37.962 62.768 127.530 1.00 61.71 O
ATOM 26 OP2 G A 77 38.144 60.314 126.768 1.00 63.21 O
ATOM 27 O5' G A 77 37.131 62.138 125.310 1.00 61.68 O
TER
ATOM 1 O3' A B 102 46.898 58.645 115.473 1.00 47.98 O
ATOM 2 P A B 103 47.528 57.494 116.386 1.00 49.01 P
ATOM 3 OP1 A B 103 47.852 56.406 115.444 1.00 48.86 O
ATOM 4 OP2 A B 103 46.640 57.220 117.555 1.00 48.54 O
ATOM 5 O5' A B 103 48.899 58.133 116.894 1.00 49.14 O
ATOM 6 C5' A B 103 49.907 58.544 115.931 1.00 50.14 C
ATOM 7 C4' A B 103 51.114 59.140 116.619 1.00 50.81 C
ATOM 8 O4' A B 103 50.840 60.471 117.133 1.00 50.67 O
ATOM 9 C3' A B 103 51.549 58.360 117.831 1.00 50.90 C
ATOM 10 O3' A B 103 52.305 57.244 117.445 1.00 51.03 O
ATOM 11 C2' A B 103 52.333 59.385 118.634 1.00 50.86 C
ATOM 12 O2' A B 103 53.675 59.522 118.223 1.00 50.33 O
ATOM 13 C1' A B 103 51.499 60.644 118.380 1.00 50.42 C
ATOM 14 N9 A B 103 50.474 60.760 119.411 1.00 50.16 N
ATOM 15 C8 A B 103 49.161 60.340 119.379 1.00 49.27 C
ATOM 16 N7 A B 103 48.521 60.526 120.508 1.00 48.63 N
ATOM 17 C5 A B 103 49.470 61.118 121.332 1.00 49.38 C
ATOM 18 C6 A B 103 49.427 61.538 122.666 1.00 49.83 C
ATOM 19 N6 A B 103 48.364 61.386 123.454 1.00 50.25 N
ATOM 20 N1 A B 103 50.535 62.111 123.179 1.00 49.71 N
ATOM 21 C2 A B 103 51.619 62.221 122.402 1.00 49.54 C
ATOM 22 N3 A B 103 51.793 61.841 121.145 1.00 48.47 N
ATOM 23 C4 A B 103 50.667 61.290 120.660 1.00 49.38 C
ATOM 24 P A B 104 52.334 55.982 118.393 1.00 51.80 P
ATOM 25 OP1 A B 104 53.085 54.976 117.600 1.00 52.10 O
ATOM 26 OP2 A B 104 50.919 55.732 118.749 1.00 50.40 O
ATOM 27 O5' A B 104 53.154 56.489 119.677 1.00 52.19 O
TER
ATOM 2 P A A 76 45.190 63.041 127.974 1.00 61.88 P
ATOM 3 OP1 A A 76 45.756 62.626 126.667 1.00 60.94 O
ATOM 4 OP2 A A 76 45.830 64.137 128.742 1.00 64.14 O
ATOM 5 O5' A A 76 43.664 63.452 127.783 1.00 61.10 O
ATOM 6 C5' A A 76 42.660 62.460 127.692 1.00 60.50 C
ATOM 7 C4' A A 76 41.764 62.722 126.513 1.00 59.13 C
ATOM 8 O4' A A 76 42.541 62.794 125.283 1.00 58.45 O
ATOM 9 C3' A A 76 40.777 61.590 126.309 1.00 59.69 C
ATOM 10 O3' A A 76 39.587 62.106 125.759 1.00 61.59 O
ATOM 11 C2' A A 76 41.479 60.720 125.283 1.00 59.56 C
ATOM 12 O2' A A 76 40.547 59.892 124.621 1.00 59.82 O
ATOM 13 C1' A A 76 42.099 61.792 124.383 1.00 58.81 C
ATOM 14 N9 A A 76 43.226 61.354 123.534 1.00 57.81 N
ATOM 15 C8 A A 76 44.581 61.440 123.763 1.00 56.99 C
ATOM 16 N7 A A 76 45.315 60.912 122.811 1.00 56.68 N
ATOM 17 C5 A A 76 44.386 60.449 121.891 1.00 56.68 C
ATOM 18 C6 A A 76 44.515 59.764 120.653 1.00 57.44 C
ATOM 19 N6 A A 76 45.681 59.370 120.130 1.00 57.91 N
ATOM 20 N1 A A 76 43.377 59.481 119.971 1.00 57.08 N
ATOM 21 C2 A A 76 42.206 59.841 120.510 1.00 56.51 C
ATOM 22 N3 A A 76 41.961 60.455 121.659 1.00 56.05 N
ATOM 23 C4 A A 76 43.100 60.734 122.311 1.00 56.39 C
ATOM 24 P G A 77 38.178 61.772 126.452 1.00 63.37 P
ATOM 25 OP1 G A 77 37.962 62.768 127.530 1.00 61.71 O
ATOM 26 OP2 G A 77 38.144 60.314 126.768 1.00 63.21 O
ATOM 27 O5' G A 77 37.131 62.138 125.310 1.00 61.68 O
TER
ATOM 1 O3' A B 102 46.898 58.645 115.473 1.00 47.98 O
ATOM 2 P A B 103 47.528 57.494 116.386 1.00 49.01 P
ATOM 3 OP1 A B 103 47.852 56.406 115.444 1.00 48.86 O
ATOM 4 OP2 A B 103 46.640 57.220 117.555 1.00 48.54 O
ATOM 5 O5' A B 103 48.899 58.133 116.894 1.00 49.14 O
ATOM 6 C5' A B 103 49.907 58.544 115.931 1.00 50.14 C
ATOM 7 C4' A B 103 51.114 59.140 116.619 1.00 50.81 C
ATOM 8 O4' A B 103 50.840 60.471 117.133 1.00 50.67 O
ATOM 9 C3' A B 103 51.549 58.360 117.831 1.00 50.90 C
ATOM 10 O3' A B 103 52.305 57.244 117.445 1.00 51.03 O
ATOM 11 C2' A B 103 52.333 59.385 118.634 1.00 50.86 C
ATOM 12 O2' A B 103 53.675 59.522 118.223 1.00 50.33 O
ATOM 13 C1' A B 103 51.499 60.644 118.380 1.00 50.42 C
ATOM 14 N9 A B 103 50.474 60.760 119.411 1.00 50.16 N
ATOM 15 C8 A B 103 49.161 60.340 119.379 1.00 49.27 C
ATOM 16 N7 A B 103 48.521 60.526 120.508 1.00 48.63 N
ATOM 17 C5 A B 103 49.470 61.118 121.332 1.00 49.38 C
ATOM 18 C6 A B 103 49.427 61.538 122.666 1.00 49.83 C
ATOM 19 N6 A B 103 48.364 61.386 123.454 1.00 50.25 N
ATOM 20 N1 A B 103 50.535 62.111 123.179 1.00 49.71 N
ATOM 21 C2 A B 103 51.619 62.221 122.402 1.00 49.54 C
ATOM 22 N3 A B 103 51.793 61.841 121.145 1.00 48.47 N
ATOM 23 C4 A B 103 50.667 61.290 120.660 1.00 49.38 C
ATOM 24 P A B 104 52.334 55.982 118.393 1.00 51.80 P
ATOM 25 OP1 A B 104 53.085 54.976 117.600 1.00 52.10 O
ATOM 26 OP2 A B 104 50.919 55.732 118.749 1.00 50.40 O
ATOM 27 O5' A B 104 53.154 56.489 119.677 1.00 52.19 O
TER
Atoms:
OP1: (45.756,62.626,126.667)
OP2: (45.830,64.137,128.742)
C3': (40.777,61.590,126.309)
C1': (42.099,61.792,124.383)
C5': (42.660,62.460,127.692)
O4': (42.541,62.794,125.283)
C8: (44.581,61.440,123.763)
O2': (40.547,59.892,124.621)
C6: (44.515,59.764,120.653)
C5: (44.386,60.449,121.891)
C4: (43.100,60.734,122.311)
P: (45.190,63.041,127.974)
C4': (41.764,62.722,126.513)
C2': (41.479,60.720,125.283)
C2: (42.206,59.841,120.510)
N1: (43.377,59.481,119.971)
N3: (41.961,60.455,121.659)
N6: (45.681,59.370,120.130)
N7: (45.315,60.912,122.811)
N9: (43.226,61.354,123.534)
O5': (43.664,63.452,127.783)
O3': (39.587,62.106,125.759)
OP2: (45.830,64.137,128.742)
C3': (40.777,61.590,126.309)
C1': (42.099,61.792,124.383)
C5': (42.660,62.460,127.692)
O4': (42.541,62.794,125.283)
C8: (44.581,61.440,123.763)
O2': (40.547,59.892,124.621)
C6: (44.515,59.764,120.653)
C5: (44.386,60.449,121.891)
C4: (43.100,60.734,122.311)
P: (45.190,63.041,127.974)
C4': (41.764,62.722,126.513)
C2': (41.479,60.720,125.283)
C2: (42.206,59.841,120.510)
N1: (43.377,59.481,119.971)
N3: (41.961,60.455,121.659)
N6: (45.681,59.370,120.130)
N7: (45.315,60.912,122.811)
N9: (43.226,61.354,123.534)
O5': (43.664,63.452,127.783)
O3': (39.587,62.106,125.759)
OP1: (47.852,56.406,115.444)
OP2: (46.640,57.220,117.555)
C3': (51.549,58.360,117.831)
C1': (51.499,60.644,118.380)
C5': (49.907,58.544,115.931)
O4': (50.840,60.471,117.133)
C8: (49.161,60.340,119.379)
O2': (53.675,59.522,118.223)
C6: (49.427,61.538,122.666)
C5: (49.470,61.118,121.332)
C4: (50.667,61.290,120.660)
P: (47.528,57.494,116.386)
C4': (51.114,59.140,116.619)
C2': (52.333,59.385,118.634)
C2: (51.619,62.221,122.402)
N1: (50.535,62.111,123.179)
N3: (51.793,61.841,121.145)
N6: (48.364,61.386,123.454)
N7: (48.521,60.526,120.508)
N9: (50.474,60.760,119.411)
O5': (48.899,58.133,116.894)
O3': (52.305,57.244,117.445)
OP2: (46.640,57.220,117.555)
C3': (51.549,58.360,117.831)
C1': (51.499,60.644,118.380)
C5': (49.907,58.544,115.931)
O4': (50.840,60.471,117.133)
C8: (49.161,60.340,119.379)
O2': (53.675,59.522,118.223)
C6: (49.427,61.538,122.666)
C5: (49.470,61.118,121.332)
C4: (50.667,61.290,120.660)
P: (47.528,57.494,116.386)
C4': (51.114,59.140,116.619)
C2': (52.333,59.385,118.634)
C2: (51.619,62.221,122.402)
N1: (50.535,62.111,123.179)
N3: (51.793,61.841,121.145)
N6: (48.364,61.386,123.454)
N7: (48.521,60.526,120.508)
N9: (50.474,60.760,119.411)
O5': (48.899,58.133,116.894)
O3': (52.305,57.244,117.445)
Image (generated by PyMOL):