Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12800:12843
Extra
PDB:
ATOM 1 O3' U A2799 24.618 58.368 47.884 1.00 49.48 O
ATOM 2 P A A2800 25.115 58.981 49.275 1.00 54.52 P
ATOM 3 OP1 A A2800 25.810 60.278 48.951 1.00 55.03 O
ATOM 4 OP2 A A2800 25.855 57.912 49.993 1.00 53.92 O
ATOM 5 O5' A A2800 23.752 59.265 50.042 1.00 54.74 O
ATOM 6 C5' A A2800 22.659 59.841 49.370 1.00 55.18 C
ATOM 7 C4' A A2800 21.461 59.962 50.258 1.00 55.31 C
ATOM 8 O4' A A2800 20.787 58.669 50.357 1.00 54.84 O
ATOM 9 C3' A A2800 21.746 60.414 51.704 1.00 55.35 C
ATOM 10 O3' A A2800 20.839 61.471 52.084 1.00 55.91 O
ATOM 11 C2' A A2800 21.425 59.156 52.509 1.00 54.79 C
ATOM 12 O2' A A2800 20.990 59.422 53.812 1.00 54.87 O
ATOM 13 C1' A A2800 20.322 58.551 51.658 1.00 54.74 C
ATOM 14 N9 A A2800 19.975 57.155 51.946 1.00 54.18 N
ATOM 15 C8 A A2800 18.706 56.785 52.312 1.00 54.17 C
ATOM 16 N7 A A2800 18.518 55.543 52.574 1.00 53.67 N
ATOM 17 C5 A A2800 19.773 55.033 52.360 1.00 53.30 C
ATOM 18 C6 A A2800 20.250 53.722 52.459 1.00 52.71 C
ATOM 19 N6 A A2800 19.453 52.695 52.829 1.00 52.38 N
ATOM 20 N1 A A2800 21.568 53.530 52.173 1.00 52.48 N
ATOM 21 C2 A A2800 22.317 54.551 51.825 1.00 52.82 C
ATOM 22 N3 A A2800 21.972 55.811 51.691 1.00 53.38 N
ATOM 23 C4 A A2800 20.685 55.995 51.978 1.00 53.60 C
ATOM 24 P A A2801 21.312 63.004 52.004 1.00 58.54 P
ATOM 25 OP1 A A2801 22.275 63.093 50.886 1.00 58.54 O
ATOM 26 OP2 A A2801 21.757 63.397 53.337 1.00 58.57 O
ATOM 27 O5' A A2801 19.982 63.803 51.637 1.00 59.12 O
TER
ATOM 1 O3' U B2842 20.577 48.955 55.248 1.00 47.87 O
ATOM 2 P A B2843 19.723 48.612 53.941 1.00 47.91 P
ATOM 3 OP1 A B2843 20.162 47.264 53.496 1.00 47.40 O
ATOM 4 OP2 A B2843 19.840 49.731 53.005 1.00 48.38 O
ATOM 5 O5' A B2843 18.266 48.595 54.525 1.00 48.07 O
ATOM 6 C5' A B2843 17.590 47.408 54.858 1.00 47.71 C
ATOM 7 C4' A B2843 16.148 47.548 54.470 1.00 48.00 C
ATOM 8 O4' A B2843 15.583 48.692 55.154 1.00 48.45 O
ATOM 9 C3' A B2843 15.922 47.841 52.996 1.00 48.25 C
ATOM 10 O3' A B2843 15.903 46.655 52.220 1.00 47.89 O
ATOM 11 C2' A B2843 14.610 48.607 52.996 1.00 48.73 C
ATOM 12 O2' A B2843 13.503 47.704 53.091 1.00 48.57 O
ATOM 13 C1' A B2843 14.710 49.383 54.310 1.00 48.90 C
ATOM 14 N9 A B2843 15.233 50.746 54.136 1.00 49.34 N
ATOM 15 C8 A B2843 16.524 51.109 53.985 1.00 49.29 C
ATOM 16 N7 A B2843 16.705 52.405 53.887 1.00 49.77 N
ATOM 17 C5 A B2843 15.458 52.930 54.009 1.00 50.16 C
ATOM 18 C6 A B2843 15.039 54.245 53.984 1.00 50.75 C
ATOM 19 N6 A B2843 15.914 55.245 53.828 1.00 51.03 N
ATOM 20 N1 A B2843 13.703 54.481 54.117 1.00 51.05 N
ATOM 21 C2 A B2843 12.917 53.411 54.265 1.00 50.74 C
ATOM 22 N3 A B2843 13.217 52.110 54.306 1.00 50.17 N
ATOM 23 C4 A B2843 14.531 51.938 54.174 1.00 49.91 C
ATOM 24 P C B2844 16.178 46.700 50.665 1.00 53.27 P
ATOM 25 OP1 C B2844 16.557 45.353 50.246 1.00 52.79 O
ATOM 26 OP2 C B2844 17.087 47.807 50.427 1.00 53.55 O
ATOM 27 O5' C B2844 14.772 47.018 50.078 1.00 53.66 O
TER
ATOM 2 P A A2800 25.115 58.981 49.275 1.00 54.52 P
ATOM 3 OP1 A A2800 25.810 60.278 48.951 1.00 55.03 O
ATOM 4 OP2 A A2800 25.855 57.912 49.993 1.00 53.92 O
ATOM 5 O5' A A2800 23.752 59.265 50.042 1.00 54.74 O
ATOM 6 C5' A A2800 22.659 59.841 49.370 1.00 55.18 C
ATOM 7 C4' A A2800 21.461 59.962 50.258 1.00 55.31 C
ATOM 8 O4' A A2800 20.787 58.669 50.357 1.00 54.84 O
ATOM 9 C3' A A2800 21.746 60.414 51.704 1.00 55.35 C
ATOM 10 O3' A A2800 20.839 61.471 52.084 1.00 55.91 O
ATOM 11 C2' A A2800 21.425 59.156 52.509 1.00 54.79 C
ATOM 12 O2' A A2800 20.990 59.422 53.812 1.00 54.87 O
ATOM 13 C1' A A2800 20.322 58.551 51.658 1.00 54.74 C
ATOM 14 N9 A A2800 19.975 57.155 51.946 1.00 54.18 N
ATOM 15 C8 A A2800 18.706 56.785 52.312 1.00 54.17 C
ATOM 16 N7 A A2800 18.518 55.543 52.574 1.00 53.67 N
ATOM 17 C5 A A2800 19.773 55.033 52.360 1.00 53.30 C
ATOM 18 C6 A A2800 20.250 53.722 52.459 1.00 52.71 C
ATOM 19 N6 A A2800 19.453 52.695 52.829 1.00 52.38 N
ATOM 20 N1 A A2800 21.568 53.530 52.173 1.00 52.48 N
ATOM 21 C2 A A2800 22.317 54.551 51.825 1.00 52.82 C
ATOM 22 N3 A A2800 21.972 55.811 51.691 1.00 53.38 N
ATOM 23 C4 A A2800 20.685 55.995 51.978 1.00 53.60 C
ATOM 24 P A A2801 21.312 63.004 52.004 1.00 58.54 P
ATOM 25 OP1 A A2801 22.275 63.093 50.886 1.00 58.54 O
ATOM 26 OP2 A A2801 21.757 63.397 53.337 1.00 58.57 O
ATOM 27 O5' A A2801 19.982 63.803 51.637 1.00 59.12 O
TER
ATOM 1 O3' U B2842 20.577 48.955 55.248 1.00 47.87 O
ATOM 2 P A B2843 19.723 48.612 53.941 1.00 47.91 P
ATOM 3 OP1 A B2843 20.162 47.264 53.496 1.00 47.40 O
ATOM 4 OP2 A B2843 19.840 49.731 53.005 1.00 48.38 O
ATOM 5 O5' A B2843 18.266 48.595 54.525 1.00 48.07 O
ATOM 6 C5' A B2843 17.590 47.408 54.858 1.00 47.71 C
ATOM 7 C4' A B2843 16.148 47.548 54.470 1.00 48.00 C
ATOM 8 O4' A B2843 15.583 48.692 55.154 1.00 48.45 O
ATOM 9 C3' A B2843 15.922 47.841 52.996 1.00 48.25 C
ATOM 10 O3' A B2843 15.903 46.655 52.220 1.00 47.89 O
ATOM 11 C2' A B2843 14.610 48.607 52.996 1.00 48.73 C
ATOM 12 O2' A B2843 13.503 47.704 53.091 1.00 48.57 O
ATOM 13 C1' A B2843 14.710 49.383 54.310 1.00 48.90 C
ATOM 14 N9 A B2843 15.233 50.746 54.136 1.00 49.34 N
ATOM 15 C8 A B2843 16.524 51.109 53.985 1.00 49.29 C
ATOM 16 N7 A B2843 16.705 52.405 53.887 1.00 49.77 N
ATOM 17 C5 A B2843 15.458 52.930 54.009 1.00 50.16 C
ATOM 18 C6 A B2843 15.039 54.245 53.984 1.00 50.75 C
ATOM 19 N6 A B2843 15.914 55.245 53.828 1.00 51.03 N
ATOM 20 N1 A B2843 13.703 54.481 54.117 1.00 51.05 N
ATOM 21 C2 A B2843 12.917 53.411 54.265 1.00 50.74 C
ATOM 22 N3 A B2843 13.217 52.110 54.306 1.00 50.17 N
ATOM 23 C4 A B2843 14.531 51.938 54.174 1.00 49.91 C
ATOM 24 P C B2844 16.178 46.700 50.665 1.00 53.27 P
ATOM 25 OP1 C B2844 16.557 45.353 50.246 1.00 52.79 O
ATOM 26 OP2 C B2844 17.087 47.807 50.427 1.00 53.55 O
ATOM 27 O5' C B2844 14.772 47.018 50.078 1.00 53.66 O
TER
Atoms:
OP1: (25.810,60.278,48.951)
OP2: (25.855,57.912,49.993)
C3': (21.746,60.414,51.704)
C1': (20.322,58.551,51.658)
C5': (22.659,59.841,49.370)
O4': (20.787,58.669,50.357)
C8: (18.706,56.785,52.312)
O2': (20.990,59.422,53.812)
C6: (20.250,53.722,52.459)
C5: (19.773,55.033,52.360)
C4: (20.685,55.995,51.978)
P: (25.115,58.981,49.275)
C4': (21.461,59.962,50.258)
C2': (21.425,59.156,52.509)
C2: (22.317,54.551,51.825)
N1: (21.568,53.530,52.173)
N3: (21.972,55.811,51.691)
N6: (19.453,52.695,52.829)
N7: (18.518,55.543,52.574)
N9: (19.975,57.155,51.946)
O5': (23.752,59.265,50.042)
O3': (20.839,61.471,52.084)
OP2: (25.855,57.912,49.993)
C3': (21.746,60.414,51.704)
C1': (20.322,58.551,51.658)
C5': (22.659,59.841,49.370)
O4': (20.787,58.669,50.357)
C8: (18.706,56.785,52.312)
O2': (20.990,59.422,53.812)
C6: (20.250,53.722,52.459)
C5: (19.773,55.033,52.360)
C4: (20.685,55.995,51.978)
P: (25.115,58.981,49.275)
C4': (21.461,59.962,50.258)
C2': (21.425,59.156,52.509)
C2: (22.317,54.551,51.825)
N1: (21.568,53.530,52.173)
N3: (21.972,55.811,51.691)
N6: (19.453,52.695,52.829)
N7: (18.518,55.543,52.574)
N9: (19.975,57.155,51.946)
O5': (23.752,59.265,50.042)
O3': (20.839,61.471,52.084)
OP1: (20.162,47.264,53.496)
OP2: (19.840,49.731,53.005)
C3': (15.922,47.841,52.996)
C1': (14.710,49.383,54.310)
C5': (17.590,47.408,54.858)
O4': (15.583,48.692,55.154)
C8: (16.524,51.109,53.985)
O2': (13.503,47.704,53.091)
C6: (15.039,54.245,53.984)
C5: (15.458,52.930,54.009)
C4: (14.531,51.938,54.174)
P: (19.723,48.612,53.941)
C4': (16.148,47.548,54.470)
C2': (14.610,48.607,52.996)
C2: (12.917,53.411,54.265)
N1: (13.703,54.481,54.117)
N3: (13.217,52.110,54.306)
N6: (15.914,55.245,53.828)
N7: (16.705,52.405,53.887)
N9: (15.233,50.746,54.136)
O5': (18.266,48.595,54.525)
O3': (15.903,46.655,52.220)
OP2: (19.840,49.731,53.005)
C3': (15.922,47.841,52.996)
C1': (14.710,49.383,54.310)
C5': (17.590,47.408,54.858)
O4': (15.583,48.692,55.154)
C8: (16.524,51.109,53.985)
O2': (13.503,47.704,53.091)
C6: (15.039,54.245,53.984)
C5: (15.458,52.930,54.009)
C4: (14.531,51.938,54.174)
P: (19.723,48.612,53.941)
C4': (16.148,47.548,54.470)
C2': (14.610,48.607,52.996)
C2: (12.917,53.411,54.265)
N1: (13.703,54.481,54.117)
N3: (13.217,52.110,54.306)
N6: (15.914,55.245,53.828)
N7: (16.705,52.405,53.887)
N9: (15.233,50.746,54.136)
O5': (18.266,48.595,54.525)
O3': (15.903,46.655,52.220)
Image (generated by PyMOL):