Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01030:0900
Extra
PDB:
ATOM 1 O3' A A1029 40.961 102.527 90.715 1.00 31.45 O
ATOM 2 P G A1030 40.299 102.939 89.318 1.00 32.84 P
ATOM 3 OP1 G A1030 41.069 102.293 88.229 1.00 29.67 O
ATOM 4 OP2 G A1030 40.113 104.419 89.326 1.00 29.57 O
ATOM 5 O5' G A1030 38.863 102.268 89.362 1.00 33.59 O
ATOM 6 C5' G A1030 37.807 102.751 88.525 1.00 34.35 C
ATOM 7 C4' G A1030 36.730 101.711 88.413 1.00 33.65 C
ATOM 8 O4' G A1030 37.225 100.569 87.667 1.00 34.70 O
ATOM 9 C3' G A1030 36.232 101.168 89.737 1.00 32.95 C
ATOM 10 O3' G A1030 34.864 100.872 89.566 1.00 33.23 O
ATOM 11 C2' G A1030 37.069 99.905 89.916 1.00 34.56 C
ATOM 12 O2' G A1030 36.452 98.917 90.712 1.00 35.31 O
ATOM 13 C1' G A1030 37.194 99.413 88.478 1.00 35.58 C
ATOM 14 N9 G A1030 38.427 98.667 88.240 1.00 37.23 N
ATOM 15 C8 G A1030 39.687 99.190 88.085 1.00 37.89 C
ATOM 16 N7 G A1030 40.596 98.280 87.886 1.00 39.47 N
ATOM 17 C5 G A1030 39.897 97.083 87.916 1.00 38.11 C
ATOM 18 C6 G A1030 40.354 95.755 87.767 1.00 39.50 C
ATOM 19 O6 G A1030 41.513 95.348 87.586 1.00 41.26 O
ATOM 20 N1 G A1030 39.308 94.848 87.851 1.00 38.51 N
ATOM 21 C2 G A1030 37.996 95.177 88.054 1.00 37.04 C
ATOM 22 N2 G A1030 37.128 94.157 88.084 1.00 38.28 N
ATOM 23 N3 G A1030 37.562 96.409 88.210 1.00 36.50 N
ATOM 24 C4 G A1030 38.558 97.306 88.127 1.00 36.45 C
ATOM 25 P G A1031 33.785 102.049 89.679 1.00 31.00 P
ATOM 26 OP1 G A1031 32.996 102.016 88.430 1.00 31.66 O
ATOM 27 OP2 G A1031 34.485 103.293 90.073 1.00 27.62 O
ATOM 28 O5' G A1031 32.862 101.572 90.879 1.00 30.86 O
TER
ATOM 1 O3' A B 899 40.714 89.611 84.527 1.00 31.64 O
ATOM 2 P A B 900 41.721 89.415 85.753 1.00 34.41 P
ATOM 3 OP1 A B 900 41.825 87.966 86.026 1.00 33.01 O
ATOM 4 OP2 A B 900 41.319 90.349 86.843 1.00 33.83 O
ATOM 5 O5' A B 900 43.117 89.885 85.159 1.00 34.22 O
ATOM 6 C5' A B 900 43.682 89.220 84.021 1.00 34.60 C
ATOM 7 C4' A B 900 44.918 89.946 83.557 1.00 35.34 C
ATOM 8 O4' A B 900 44.557 91.260 83.055 1.00 35.96 O
ATOM 9 C3' A B 900 45.939 90.240 84.636 1.00 33.44 C
ATOM 10 O3' A B 900 46.752 89.118 84.929 1.00 30.43 O
ATOM 11 C2' A B 900 46.705 91.402 84.032 1.00 33.33 C
ATOM 12 O2' A B 900 47.593 90.944 83.029 1.00 33.25 O
ATOM 13 C1' A B 900 45.559 92.201 83.404 1.00 33.48 C
ATOM 14 N9 A B 900 44.943 93.153 84.327 1.00 33.44 N
ATOM 15 C8 A B 900 43.784 92.968 85.041 1.00 33.15 C
ATOM 16 N7 A B 900 43.452 93.988 85.787 1.00 32.50 N
ATOM 17 C5 A B 900 44.458 94.910 85.552 1.00 33.13 C
ATOM 18 C6 A B 900 44.677 96.199 86.041 1.00 33.26 C
ATOM 19 N6 A B 900 43.842 96.816 86.882 1.00 33.58 N
ATOM 20 N1 A B 900 45.788 96.848 85.627 1.00 32.61 N
ATOM 21 C2 A B 900 46.602 96.236 84.762 1.00 32.85 C
ATOM 22 N3 A B 900 46.492 95.032 84.213 1.00 33.63 N
ATOM 23 C4 A B 900 45.387 94.409 84.658 1.00 33.90 C
ATOM 24 P A B 901 47.350 88.964 86.404 1.00 30.34 P
ATOM 25 OP1 A B 901 47.923 87.612 86.494 1.00 30.36 O
ATOM 26 OP2 A B 901 46.307 89.385 87.362 1.00 29.97 O
ATOM 27 O5' A B 901 48.501 90.065 86.439 1.00 32.60 O
TER
ATOM 2 P G A1030 40.299 102.939 89.318 1.00 32.84 P
ATOM 3 OP1 G A1030 41.069 102.293 88.229 1.00 29.67 O
ATOM 4 OP2 G A1030 40.113 104.419 89.326 1.00 29.57 O
ATOM 5 O5' G A1030 38.863 102.268 89.362 1.00 33.59 O
ATOM 6 C5' G A1030 37.807 102.751 88.525 1.00 34.35 C
ATOM 7 C4' G A1030 36.730 101.711 88.413 1.00 33.65 C
ATOM 8 O4' G A1030 37.225 100.569 87.667 1.00 34.70 O
ATOM 9 C3' G A1030 36.232 101.168 89.737 1.00 32.95 C
ATOM 10 O3' G A1030 34.864 100.872 89.566 1.00 33.23 O
ATOM 11 C2' G A1030 37.069 99.905 89.916 1.00 34.56 C
ATOM 12 O2' G A1030 36.452 98.917 90.712 1.00 35.31 O
ATOM 13 C1' G A1030 37.194 99.413 88.478 1.00 35.58 C
ATOM 14 N9 G A1030 38.427 98.667 88.240 1.00 37.23 N
ATOM 15 C8 G A1030 39.687 99.190 88.085 1.00 37.89 C
ATOM 16 N7 G A1030 40.596 98.280 87.886 1.00 39.47 N
ATOM 17 C5 G A1030 39.897 97.083 87.916 1.00 38.11 C
ATOM 18 C6 G A1030 40.354 95.755 87.767 1.00 39.50 C
ATOM 19 O6 G A1030 41.513 95.348 87.586 1.00 41.26 O
ATOM 20 N1 G A1030 39.308 94.848 87.851 1.00 38.51 N
ATOM 21 C2 G A1030 37.996 95.177 88.054 1.00 37.04 C
ATOM 22 N2 G A1030 37.128 94.157 88.084 1.00 38.28 N
ATOM 23 N3 G A1030 37.562 96.409 88.210 1.00 36.50 N
ATOM 24 C4 G A1030 38.558 97.306 88.127 1.00 36.45 C
ATOM 25 P G A1031 33.785 102.049 89.679 1.00 31.00 P
ATOM 26 OP1 G A1031 32.996 102.016 88.430 1.00 31.66 O
ATOM 27 OP2 G A1031 34.485 103.293 90.073 1.00 27.62 O
ATOM 28 O5' G A1031 32.862 101.572 90.879 1.00 30.86 O
TER
ATOM 1 O3' A B 899 40.714 89.611 84.527 1.00 31.64 O
ATOM 2 P A B 900 41.721 89.415 85.753 1.00 34.41 P
ATOM 3 OP1 A B 900 41.825 87.966 86.026 1.00 33.01 O
ATOM 4 OP2 A B 900 41.319 90.349 86.843 1.00 33.83 O
ATOM 5 O5' A B 900 43.117 89.885 85.159 1.00 34.22 O
ATOM 6 C5' A B 900 43.682 89.220 84.021 1.00 34.60 C
ATOM 7 C4' A B 900 44.918 89.946 83.557 1.00 35.34 C
ATOM 8 O4' A B 900 44.557 91.260 83.055 1.00 35.96 O
ATOM 9 C3' A B 900 45.939 90.240 84.636 1.00 33.44 C
ATOM 10 O3' A B 900 46.752 89.118 84.929 1.00 30.43 O
ATOM 11 C2' A B 900 46.705 91.402 84.032 1.00 33.33 C
ATOM 12 O2' A B 900 47.593 90.944 83.029 1.00 33.25 O
ATOM 13 C1' A B 900 45.559 92.201 83.404 1.00 33.48 C
ATOM 14 N9 A B 900 44.943 93.153 84.327 1.00 33.44 N
ATOM 15 C8 A B 900 43.784 92.968 85.041 1.00 33.15 C
ATOM 16 N7 A B 900 43.452 93.988 85.787 1.00 32.50 N
ATOM 17 C5 A B 900 44.458 94.910 85.552 1.00 33.13 C
ATOM 18 C6 A B 900 44.677 96.199 86.041 1.00 33.26 C
ATOM 19 N6 A B 900 43.842 96.816 86.882 1.00 33.58 N
ATOM 20 N1 A B 900 45.788 96.848 85.627 1.00 32.61 N
ATOM 21 C2 A B 900 46.602 96.236 84.762 1.00 32.85 C
ATOM 22 N3 A B 900 46.492 95.032 84.213 1.00 33.63 N
ATOM 23 C4 A B 900 45.387 94.409 84.658 1.00 33.90 C
ATOM 24 P A B 901 47.350 88.964 86.404 1.00 30.34 P
ATOM 25 OP1 A B 901 47.923 87.612 86.494 1.00 30.36 O
ATOM 26 OP2 A B 901 46.307 89.385 87.362 1.00 29.97 O
ATOM 27 O5' A B 901 48.501 90.065 86.439 1.00 32.60 O
TER
Atoms:
OP1: (41.069,102.293,88.229)
OP2: (40.113,104.419,89.326)
C3': (36.232,101.168,89.737)
C1': (37.194,99.413,88.478)
C5': (37.807,102.751,88.525)
O6: (41.513,95.348,87.586)
O4': (37.225,100.569,87.667)
C8: (39.687,99.190,88.085)
C2: (37.996,95.177,88.054)
C6: (40.354,95.755,87.767)
C5: (39.897,97.083,87.916)
C4: (38.558,97.306,88.127)
P: (40.299,102.939,89.318)
C4': (36.730,101.711,88.413)
C2': (37.069,99.905,89.916)
O2': (36.452,98.917,90.712)
N1: (39.308,94.848,87.851)
N2: (37.128,94.157,88.084)
N3: (37.562,96.409,88.210)
N7: (40.596,98.280,87.886)
N9: (38.427,98.667,88.240)
O5': (38.863,102.268,89.362)
O3': (34.864,100.872,89.566)
OP2: (40.113,104.419,89.326)
C3': (36.232,101.168,89.737)
C1': (37.194,99.413,88.478)
C5': (37.807,102.751,88.525)
O6: (41.513,95.348,87.586)
O4': (37.225,100.569,87.667)
C8: (39.687,99.190,88.085)
C2: (37.996,95.177,88.054)
C6: (40.354,95.755,87.767)
C5: (39.897,97.083,87.916)
C4: (38.558,97.306,88.127)
P: (40.299,102.939,89.318)
C4': (36.730,101.711,88.413)
C2': (37.069,99.905,89.916)
O2': (36.452,98.917,90.712)
N1: (39.308,94.848,87.851)
N2: (37.128,94.157,88.084)
N3: (37.562,96.409,88.210)
N7: (40.596,98.280,87.886)
N9: (38.427,98.667,88.240)
O5': (38.863,102.268,89.362)
O3': (34.864,100.872,89.566)
OP1: (41.825,87.966,86.026)
OP2: (41.319,90.349,86.843)
C3': (45.939,90.240,84.636)
C1': (45.559,92.201,83.404)
C5': (43.682,89.220,84.021)
O4': (44.557,91.260,83.055)
C8: (43.784,92.968,85.041)
O2': (47.593,90.944,83.029)
C6: (44.677,96.199,86.041)
C5: (44.458,94.910,85.552)
C4: (45.387,94.409,84.658)
P: (41.721,89.415,85.753)
C4': (44.918,89.946,83.557)
C2': (46.705,91.402,84.032)
C2: (46.602,96.236,84.762)
N1: (45.788,96.848,85.627)
N3: (46.492,95.032,84.213)
N6: (43.842,96.816,86.882)
N7: (43.452,93.988,85.787)
N9: (44.943,93.153,84.327)
O5': (43.117,89.885,85.159)
O3': (46.752,89.118,84.929)
OP2: (41.319,90.349,86.843)
C3': (45.939,90.240,84.636)
C1': (45.559,92.201,83.404)
C5': (43.682,89.220,84.021)
O4': (44.557,91.260,83.055)
C8: (43.784,92.968,85.041)
O2': (47.593,90.944,83.029)
C6: (44.677,96.199,86.041)
C5: (44.458,94.910,85.552)
C4: (45.387,94.409,84.658)
P: (41.721,89.415,85.753)
C4': (44.918,89.946,83.557)
C2': (46.705,91.402,84.032)
C2: (46.602,96.236,84.762)
N1: (45.788,96.848,85.627)
N3: (46.492,95.032,84.213)
N6: (43.842,96.816,86.882)
N7: (43.452,93.988,85.787)
N9: (44.943,93.153,84.327)
O5': (43.117,89.885,85.159)
O3': (46.752,89.118,84.929)
Image (generated by PyMOL):