Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02530:02542
Extra
PDB:
ATOM 1 O3' U A2529 69.863 137.548 169.922 1.00 68.19 O
ATOM 2 P A A2530 70.938 136.544 170.578 1.00 69.01 P
ATOM 3 OP1 A A2530 70.927 135.240 169.867 1.00 68.63 O
ATOM 4 OP2 A A2530 70.696 136.584 172.040 1.00 70.04 O
ATOM 5 O5' A A2530 72.348 137.223 170.297 1.00 68.81 O
ATOM 6 C5' A A2530 73.520 136.778 170.995 1.00 69.67 C
ATOM 7 C4' A A2530 74.707 136.762 170.067 1.00 70.79 C
ATOM 8 O4' A A2530 74.518 135.738 169.051 1.00 70.98 O
ATOM 9 C3' A A2530 74.968 138.062 169.313 1.00 71.07 C
ATOM 10 O3' A A2530 76.367 138.156 169.075 1.00 71.46 O
ATOM 11 C2' A A2530 74.254 137.809 167.988 1.00 70.98 C
ATOM 12 O2' A A2530 74.744 138.590 166.918 1.00 70.77 O
ATOM 13 C1' A A2530 74.576 136.332 167.770 1.00 70.68 C
ATOM 14 N9 A A2530 73.649 135.628 166.886 1.00 70.36 N
ATOM 15 C8 A A2530 72.322 135.343 167.095 1.00 70.11 C
ATOM 16 N7 A A2530 71.758 134.701 166.102 1.00 70.24 N
ATOM 17 C5 A A2530 72.780 134.552 165.176 1.00 69.42 C
ATOM 18 C6 A A2530 72.822 133.964 163.902 1.00 68.72 C
ATOM 19 N6 A A2530 71.772 133.392 163.319 1.00 67.22 N
ATOM 20 N1 A A2530 73.998 133.988 163.237 1.00 69.61 N
ATOM 21 C2 A A2530 75.055 134.565 163.824 1.00 69.24 C
ATOM 22 N3 A A2530 75.139 135.153 165.015 1.00 69.37 N
ATOM 23 C4 A A2530 73.952 135.114 165.647 1.00 69.84 C
ATOM 24 P G A2531 77.250 139.227 169.877 1.00 70.57 P
ATOM 25 OP1 G A2531 77.054 138.987 171.327 1.00 71.85 O
ATOM 26 OP2 G A2531 76.981 140.580 169.318 1.00 70.76 O
ATOM 27 O5' G A2531 78.733 138.795 169.489 1.00 69.96 O
TER
ATOM 1 O3' A B2541 71.715 130.650 159.597 1.00 61.02 O
ATOM 2 P A B2542 70.721 131.908 159.489 1.00 62.38 P
ATOM 3 OP1 A B2542 70.498 132.189 158.050 1.00 62.50 O
ATOM 4 OP2 A B2542 71.230 132.990 160.372 1.00 62.38 O
ATOM 5 O5' A B2542 69.353 131.365 160.098 1.00 61.80 O
ATOM 6 C5' A B2542 68.792 130.116 159.657 1.00 60.18 C
ATOM 7 C4' A B2542 67.670 129.710 160.571 1.00 60.03 C
ATOM 8 O4' A B2542 68.194 129.523 161.907 1.00 61.27 O
ATOM 9 C3' A B2542 66.577 130.752 160.727 1.00 59.43 C
ATOM 10 O3' A B2542 65.626 130.602 159.683 1.00 58.45 O
ATOM 11 C2' A B2542 65.989 130.419 162.092 1.00 60.42 C
ATOM 12 O2' A B2542 65.047 129.371 162.036 1.00 59.13 O
ATOM 13 C1' A B2542 67.232 129.950 162.857 1.00 62.70 C
ATOM 14 N9 A B2542 67.847 130.964 163.718 1.00 64.84 N
ATOM 15 C8 A B2542 68.962 131.726 163.469 1.00 65.17 C
ATOM 16 N7 A B2542 69.267 132.551 164.441 1.00 66.63 N
ATOM 17 C5 A B2542 68.286 132.318 165.396 1.00 68.02 C
ATOM 18 C6 A B2542 68.046 132.879 166.666 1.00 68.78 C
ATOM 19 N6 A B2542 68.808 133.830 167.216 1.00 69.64 N
ATOM 20 N1 A B2542 66.982 132.423 167.362 1.00 68.73 N
ATOM 21 C2 A B2542 66.219 131.471 166.814 1.00 68.31 C
ATOM 22 N3 A B2542 66.342 130.867 165.634 1.00 67.69 N
ATOM 23 C4 A B2542 67.406 131.343 164.965 1.00 66.69 C
ATOM 24 P C B2543 64.816 131.876 159.141 1.00 58.05 P
ATOM 25 OP1 C B2543 64.144 131.448 157.890 1.00 59.42 O
ATOM 26 OP2 C B2543 65.732 133.042 159.117 1.00 58.30 O
ATOM 27 O5' C B2543 63.687 132.104 160.239 1.00 57.11 O
TER
ATOM 2 P A A2530 70.938 136.544 170.578 1.00 69.01 P
ATOM 3 OP1 A A2530 70.927 135.240 169.867 1.00 68.63 O
ATOM 4 OP2 A A2530 70.696 136.584 172.040 1.00 70.04 O
ATOM 5 O5' A A2530 72.348 137.223 170.297 1.00 68.81 O
ATOM 6 C5' A A2530 73.520 136.778 170.995 1.00 69.67 C
ATOM 7 C4' A A2530 74.707 136.762 170.067 1.00 70.79 C
ATOM 8 O4' A A2530 74.518 135.738 169.051 1.00 70.98 O
ATOM 9 C3' A A2530 74.968 138.062 169.313 1.00 71.07 C
ATOM 10 O3' A A2530 76.367 138.156 169.075 1.00 71.46 O
ATOM 11 C2' A A2530 74.254 137.809 167.988 1.00 70.98 C
ATOM 12 O2' A A2530 74.744 138.590 166.918 1.00 70.77 O
ATOM 13 C1' A A2530 74.576 136.332 167.770 1.00 70.68 C
ATOM 14 N9 A A2530 73.649 135.628 166.886 1.00 70.36 N
ATOM 15 C8 A A2530 72.322 135.343 167.095 1.00 70.11 C
ATOM 16 N7 A A2530 71.758 134.701 166.102 1.00 70.24 N
ATOM 17 C5 A A2530 72.780 134.552 165.176 1.00 69.42 C
ATOM 18 C6 A A2530 72.822 133.964 163.902 1.00 68.72 C
ATOM 19 N6 A A2530 71.772 133.392 163.319 1.00 67.22 N
ATOM 20 N1 A A2530 73.998 133.988 163.237 1.00 69.61 N
ATOM 21 C2 A A2530 75.055 134.565 163.824 1.00 69.24 C
ATOM 22 N3 A A2530 75.139 135.153 165.015 1.00 69.37 N
ATOM 23 C4 A A2530 73.952 135.114 165.647 1.00 69.84 C
ATOM 24 P G A2531 77.250 139.227 169.877 1.00 70.57 P
ATOM 25 OP1 G A2531 77.054 138.987 171.327 1.00 71.85 O
ATOM 26 OP2 G A2531 76.981 140.580 169.318 1.00 70.76 O
ATOM 27 O5' G A2531 78.733 138.795 169.489 1.00 69.96 O
TER
ATOM 1 O3' A B2541 71.715 130.650 159.597 1.00 61.02 O
ATOM 2 P A B2542 70.721 131.908 159.489 1.00 62.38 P
ATOM 3 OP1 A B2542 70.498 132.189 158.050 1.00 62.50 O
ATOM 4 OP2 A B2542 71.230 132.990 160.372 1.00 62.38 O
ATOM 5 O5' A B2542 69.353 131.365 160.098 1.00 61.80 O
ATOM 6 C5' A B2542 68.792 130.116 159.657 1.00 60.18 C
ATOM 7 C4' A B2542 67.670 129.710 160.571 1.00 60.03 C
ATOM 8 O4' A B2542 68.194 129.523 161.907 1.00 61.27 O
ATOM 9 C3' A B2542 66.577 130.752 160.727 1.00 59.43 C
ATOM 10 O3' A B2542 65.626 130.602 159.683 1.00 58.45 O
ATOM 11 C2' A B2542 65.989 130.419 162.092 1.00 60.42 C
ATOM 12 O2' A B2542 65.047 129.371 162.036 1.00 59.13 O
ATOM 13 C1' A B2542 67.232 129.950 162.857 1.00 62.70 C
ATOM 14 N9 A B2542 67.847 130.964 163.718 1.00 64.84 N
ATOM 15 C8 A B2542 68.962 131.726 163.469 1.00 65.17 C
ATOM 16 N7 A B2542 69.267 132.551 164.441 1.00 66.63 N
ATOM 17 C5 A B2542 68.286 132.318 165.396 1.00 68.02 C
ATOM 18 C6 A B2542 68.046 132.879 166.666 1.00 68.78 C
ATOM 19 N6 A B2542 68.808 133.830 167.216 1.00 69.64 N
ATOM 20 N1 A B2542 66.982 132.423 167.362 1.00 68.73 N
ATOM 21 C2 A B2542 66.219 131.471 166.814 1.00 68.31 C
ATOM 22 N3 A B2542 66.342 130.867 165.634 1.00 67.69 N
ATOM 23 C4 A B2542 67.406 131.343 164.965 1.00 66.69 C
ATOM 24 P C B2543 64.816 131.876 159.141 1.00 58.05 P
ATOM 25 OP1 C B2543 64.144 131.448 157.890 1.00 59.42 O
ATOM 26 OP2 C B2543 65.732 133.042 159.117 1.00 58.30 O
ATOM 27 O5' C B2543 63.687 132.104 160.239 1.00 57.11 O
TER
Atoms:
OP1: (70.927,135.240,169.867)
OP2: (70.696,136.584,172.040)
C3': (74.968,138.062,169.313)
C1': (74.576,136.332,167.770)
C5': (73.520,136.778,170.995)
O4': (74.518,135.738,169.051)
C8: (72.322,135.343,167.095)
O2': (74.744,138.590,166.918)
C6: (72.822,133.964,163.902)
C5: (72.780,134.552,165.176)
C4: (73.952,135.114,165.647)
P: (70.938,136.544,170.578)
C4': (74.707,136.762,170.067)
C2': (74.254,137.809,167.988)
C2: (75.055,134.565,163.824)
N1: (73.998,133.988,163.237)
N3: (75.139,135.153,165.015)
N6: (71.772,133.392,163.319)
N7: (71.758,134.701,166.102)
N9: (73.649,135.628,166.886)
O5': (72.348,137.223,170.297)
O3': (76.367,138.156,169.075)
OP2: (70.696,136.584,172.040)
C3': (74.968,138.062,169.313)
C1': (74.576,136.332,167.770)
C5': (73.520,136.778,170.995)
O4': (74.518,135.738,169.051)
C8: (72.322,135.343,167.095)
O2': (74.744,138.590,166.918)
C6: (72.822,133.964,163.902)
C5: (72.780,134.552,165.176)
C4: (73.952,135.114,165.647)
P: (70.938,136.544,170.578)
C4': (74.707,136.762,170.067)
C2': (74.254,137.809,167.988)
C2: (75.055,134.565,163.824)
N1: (73.998,133.988,163.237)
N3: (75.139,135.153,165.015)
N6: (71.772,133.392,163.319)
N7: (71.758,134.701,166.102)
N9: (73.649,135.628,166.886)
O5': (72.348,137.223,170.297)
O3': (76.367,138.156,169.075)
OP1: (70.498,132.189,158.050)
OP2: (71.230,132.990,160.372)
C3': (66.577,130.752,160.727)
C1': (67.232,129.950,162.857)
C5': (68.792,130.116,159.657)
O4': (68.194,129.523,161.907)
C8: (68.962,131.726,163.469)
O2': (65.047,129.371,162.036)
C6: (68.046,132.879,166.666)
C5: (68.286,132.318,165.396)
C4: (67.406,131.343,164.965)
P: (70.721,131.908,159.489)
C4': (67.670,129.710,160.571)
C2': (65.989,130.419,162.092)
C2: (66.219,131.471,166.814)
N1: (66.982,132.423,167.362)
N3: (66.342,130.867,165.634)
N6: (68.808,133.830,167.216)
N7: (69.267,132.551,164.441)
N9: (67.847,130.964,163.718)
O5': (69.353,131.365,160.098)
O3': (65.626,130.602,159.683)
OP2: (71.230,132.990,160.372)
C3': (66.577,130.752,160.727)
C1': (67.232,129.950,162.857)
C5': (68.792,130.116,159.657)
O4': (68.194,129.523,161.907)
C8: (68.962,131.726,163.469)
O2': (65.047,129.371,162.036)
C6: (68.046,132.879,166.666)
C5: (68.286,132.318,165.396)
C4: (67.406,131.343,164.965)
P: (70.721,131.908,159.489)
C4': (67.670,129.710,160.571)
C2': (65.989,130.419,162.092)
C2: (66.219,131.471,166.814)
N1: (66.982,132.423,167.362)
N3: (66.342,130.867,165.634)
N6: (68.808,133.830,167.216)
N7: (69.267,132.551,164.441)
N9: (67.847,130.964,163.718)
O5': (69.353,131.365,160.098)
O3': (65.626,130.602,159.683)
Image (generated by PyMOL):