Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1725:A1734
Extra
PDB:
ATOM 1 O3' U A1724 116.492 155.536 114.839 1.00 68.88 O
ATOM 2 P A A1725 117.602 154.721 114.031 1.00 68.42 P
ATOM 3 OP1 A A1725 118.887 155.293 114.506 1.00 68.71 O
ATOM 4 OP2 A A1725 117.252 154.795 112.591 1.00 67.50 O
ATOM 5 O5' A A1725 117.416 153.219 114.537 1.00 66.06 O
ATOM 6 C5' A A1725 117.555 152.884 115.927 1.00 64.34 C
ATOM 7 C4' A A1725 116.746 151.651 116.251 1.00 63.78 C
ATOM 8 O4' A A1725 115.331 151.935 116.084 1.00 63.76 O
ATOM 9 C3' A A1725 117.000 150.468 115.338 1.00 63.45 C
ATOM 10 O3' A A1725 118.138 149.734 115.745 1.00 64.21 O
ATOM 11 C2' A A1725 115.709 149.678 115.473 1.00 63.95 C
ATOM 12 O2' A A1725 115.649 148.947 116.683 1.00 63.27 O
ATOM 13 C1' A A1725 114.675 150.808 115.517 1.00 64.08 C
ATOM 14 N9 A A1725 114.163 151.196 114.193 1.00 63.58 N
ATOM 15 C8 A A1725 114.474 152.341 113.495 1.00 63.71 C
ATOM 16 N7 A A1725 113.883 152.434 112.328 1.00 63.22 N
ATOM 17 C5 A A1725 113.124 151.276 112.247 1.00 63.50 C
ATOM 18 C6 A A1725 112.259 150.776 111.245 1.00 63.44 C
ATOM 19 N6 A A1725 112.014 151.408 110.097 1.00 63.15 N
ATOM 20 N1 A A1725 111.653 149.589 111.471 1.00 62.85 N
ATOM 21 C2 A A1725 111.904 148.955 112.621 1.00 62.27 C
ATOM 22 N3 A A1725 112.693 149.317 113.639 1.00 62.73 N
ATOM 23 C4 A A1725 113.283 150.502 113.389 1.00 63.32 C
ATOM 24 P C A1726 118.971 148.896 114.656 1.00 65.25 P
ATOM 25 OP1 C A1726 120.231 148.456 115.302 1.00 65.87 O
ATOM 26 OP2 C A1726 119.034 149.687 113.409 1.00 65.45 O
ATOM 27 O5' C A1726 118.068 147.608 114.424 1.00 65.56 O
TER
ATOM 1 O3' A B1733 109.700 150.825 105.772 1.00 53.08 O
ATOM 2 P A B1734 109.021 151.861 106.806 1.00 53.16 P
ATOM 3 OP1 A B1734 109.752 151.730 108.085 1.00 55.47 O
ATOM 4 OP2 A B1734 107.538 151.760 106.810 1.00 54.35 O
ATOM 5 O5' A B1734 109.382 153.277 106.193 1.00 55.01 O
ATOM 6 C5' A B1734 108.425 154.350 106.197 1.00 56.62 C
ATOM 7 C4' A B1734 109.102 155.637 105.794 1.00 57.88 C
ATOM 8 O4' A B1734 110.013 156.059 106.844 1.00 58.33 O
ATOM 9 C3' A B1734 109.948 155.522 104.531 1.00 57.79 C
ATOM 10 O3' A B1734 109.998 156.790 103.886 1.00 56.27 O
ATOM 11 C2' A B1734 111.313 155.147 105.093 1.00 58.12 C
ATOM 12 O2' A B1734 112.352 155.499 104.214 1.00 57.10 O
ATOM 13 C1' A B1734 111.344 155.972 106.382 1.00 59.77 C
ATOM 14 N9 A B1734 112.133 155.381 107.461 1.00 62.58 N
ATOM 15 C8 A B1734 111.920 154.180 108.096 1.00 63.11 C
ATOM 16 N7 A B1734 112.782 153.926 109.048 1.00 63.84 N
ATOM 17 C5 A B1734 113.624 155.029 109.038 1.00 63.92 C
ATOM 18 C6 A B1734 114.742 155.362 109.811 1.00 63.78 C
ATOM 19 N6 A B1734 115.219 154.592 110.792 1.00 63.07 N
ATOM 20 N1 A B1734 115.365 156.530 109.542 1.00 64.03 N
ATOM 21 C2 A B1734 114.883 157.307 108.563 1.00 63.95 C
ATOM 22 N3 A B1734 113.836 157.107 107.769 1.00 64.29 N
ATOM 23 C4 A B1734 113.241 155.932 108.061 1.00 64.00 C
ATOM 24 P G B1735 108.730 157.310 103.057 1.00 55.07 P
ATOM 25 OP1 G B1735 107.721 156.223 103.079 1.00 56.51 O
ATOM 26 OP2 G B1735 109.238 157.818 101.770 1.00 55.03 O
ATOM 27 O5' G B1735 108.190 158.540 103.905 1.00 54.96 O
TER
ATOM 2 P A A1725 117.602 154.721 114.031 1.00 68.42 P
ATOM 3 OP1 A A1725 118.887 155.293 114.506 1.00 68.71 O
ATOM 4 OP2 A A1725 117.252 154.795 112.591 1.00 67.50 O
ATOM 5 O5' A A1725 117.416 153.219 114.537 1.00 66.06 O
ATOM 6 C5' A A1725 117.555 152.884 115.927 1.00 64.34 C
ATOM 7 C4' A A1725 116.746 151.651 116.251 1.00 63.78 C
ATOM 8 O4' A A1725 115.331 151.935 116.084 1.00 63.76 O
ATOM 9 C3' A A1725 117.000 150.468 115.338 1.00 63.45 C
ATOM 10 O3' A A1725 118.138 149.734 115.745 1.00 64.21 O
ATOM 11 C2' A A1725 115.709 149.678 115.473 1.00 63.95 C
ATOM 12 O2' A A1725 115.649 148.947 116.683 1.00 63.27 O
ATOM 13 C1' A A1725 114.675 150.808 115.517 1.00 64.08 C
ATOM 14 N9 A A1725 114.163 151.196 114.193 1.00 63.58 N
ATOM 15 C8 A A1725 114.474 152.341 113.495 1.00 63.71 C
ATOM 16 N7 A A1725 113.883 152.434 112.328 1.00 63.22 N
ATOM 17 C5 A A1725 113.124 151.276 112.247 1.00 63.50 C
ATOM 18 C6 A A1725 112.259 150.776 111.245 1.00 63.44 C
ATOM 19 N6 A A1725 112.014 151.408 110.097 1.00 63.15 N
ATOM 20 N1 A A1725 111.653 149.589 111.471 1.00 62.85 N
ATOM 21 C2 A A1725 111.904 148.955 112.621 1.00 62.27 C
ATOM 22 N3 A A1725 112.693 149.317 113.639 1.00 62.73 N
ATOM 23 C4 A A1725 113.283 150.502 113.389 1.00 63.32 C
ATOM 24 P C A1726 118.971 148.896 114.656 1.00 65.25 P
ATOM 25 OP1 C A1726 120.231 148.456 115.302 1.00 65.87 O
ATOM 26 OP2 C A1726 119.034 149.687 113.409 1.00 65.45 O
ATOM 27 O5' C A1726 118.068 147.608 114.424 1.00 65.56 O
TER
ATOM 1 O3' A B1733 109.700 150.825 105.772 1.00 53.08 O
ATOM 2 P A B1734 109.021 151.861 106.806 1.00 53.16 P
ATOM 3 OP1 A B1734 109.752 151.730 108.085 1.00 55.47 O
ATOM 4 OP2 A B1734 107.538 151.760 106.810 1.00 54.35 O
ATOM 5 O5' A B1734 109.382 153.277 106.193 1.00 55.01 O
ATOM 6 C5' A B1734 108.425 154.350 106.197 1.00 56.62 C
ATOM 7 C4' A B1734 109.102 155.637 105.794 1.00 57.88 C
ATOM 8 O4' A B1734 110.013 156.059 106.844 1.00 58.33 O
ATOM 9 C3' A B1734 109.948 155.522 104.531 1.00 57.79 C
ATOM 10 O3' A B1734 109.998 156.790 103.886 1.00 56.27 O
ATOM 11 C2' A B1734 111.313 155.147 105.093 1.00 58.12 C
ATOM 12 O2' A B1734 112.352 155.499 104.214 1.00 57.10 O
ATOM 13 C1' A B1734 111.344 155.972 106.382 1.00 59.77 C
ATOM 14 N9 A B1734 112.133 155.381 107.461 1.00 62.58 N
ATOM 15 C8 A B1734 111.920 154.180 108.096 1.00 63.11 C
ATOM 16 N7 A B1734 112.782 153.926 109.048 1.00 63.84 N
ATOM 17 C5 A B1734 113.624 155.029 109.038 1.00 63.92 C
ATOM 18 C6 A B1734 114.742 155.362 109.811 1.00 63.78 C
ATOM 19 N6 A B1734 115.219 154.592 110.792 1.00 63.07 N
ATOM 20 N1 A B1734 115.365 156.530 109.542 1.00 64.03 N
ATOM 21 C2 A B1734 114.883 157.307 108.563 1.00 63.95 C
ATOM 22 N3 A B1734 113.836 157.107 107.769 1.00 64.29 N
ATOM 23 C4 A B1734 113.241 155.932 108.061 1.00 64.00 C
ATOM 24 P G B1735 108.730 157.310 103.057 1.00 55.07 P
ATOM 25 OP1 G B1735 107.721 156.223 103.079 1.00 56.51 O
ATOM 26 OP2 G B1735 109.238 157.818 101.770 1.00 55.03 O
ATOM 27 O5' G B1735 108.190 158.540 103.905 1.00 54.96 O
TER
Atoms:
OP1: (118.887,155.293,114.506)
OP2: (117.252,154.795,112.591)
C3': (117.000,150.468,115.338)
C1': (114.675,150.808,115.517)
C5': (117.555,152.884,115.927)
O4': (115.331,151.935,116.084)
C8: (114.474,152.341,113.495)
O2': (115.649,148.947,116.683)
C6: (112.259,150.776,111.245)
C5: (113.124,151.276,112.247)
C4: (113.283,150.502,113.389)
P: (117.602,154.721,114.031)
C4': (116.746,151.651,116.251)
C2': (115.709,149.678,115.473)
C2: (111.904,148.955,112.621)
N1: (111.653,149.589,111.471)
N3: (112.693,149.317,113.639)
N6: (112.014,151.408,110.097)
N7: (113.883,152.434,112.328)
N9: (114.163,151.196,114.193)
O5': (117.416,153.219,114.537)
O3': (118.138,149.734,115.745)
OP2: (117.252,154.795,112.591)
C3': (117.000,150.468,115.338)
C1': (114.675,150.808,115.517)
C5': (117.555,152.884,115.927)
O4': (115.331,151.935,116.084)
C8: (114.474,152.341,113.495)
O2': (115.649,148.947,116.683)
C6: (112.259,150.776,111.245)
C5: (113.124,151.276,112.247)
C4: (113.283,150.502,113.389)
P: (117.602,154.721,114.031)
C4': (116.746,151.651,116.251)
C2': (115.709,149.678,115.473)
C2: (111.904,148.955,112.621)
N1: (111.653,149.589,111.471)
N3: (112.693,149.317,113.639)
N6: (112.014,151.408,110.097)
N7: (113.883,152.434,112.328)
N9: (114.163,151.196,114.193)
O5': (117.416,153.219,114.537)
O3': (118.138,149.734,115.745)
OP1: (109.752,151.730,108.085)
OP2: (107.538,151.760,106.810)
C3': (109.948,155.522,104.531)
C1': (111.344,155.972,106.382)
C5': (108.425,154.350,106.197)
O4': (110.013,156.059,106.844)
C8: (111.920,154.180,108.096)
O2': (112.352,155.499,104.214)
C6: (114.742,155.362,109.811)
C5: (113.624,155.029,109.038)
C4: (113.241,155.932,108.061)
P: (109.021,151.861,106.806)
C4': (109.102,155.637,105.794)
C2': (111.313,155.147,105.093)
C2: (114.883,157.307,108.563)
N1: (115.365,156.530,109.542)
N3: (113.836,157.107,107.769)
N6: (115.219,154.592,110.792)
N7: (112.782,153.926,109.048)
N9: (112.133,155.381,107.461)
O5': (109.382,153.277,106.193)
O3': (109.998,156.790,103.886)
OP2: (107.538,151.760,106.810)
C3': (109.948,155.522,104.531)
C1': (111.344,155.972,106.382)
C5': (108.425,154.350,106.197)
O4': (110.013,156.059,106.844)
C8: (111.920,154.180,108.096)
O2': (112.352,155.499,104.214)
C6: (114.742,155.362,109.811)
C5: (113.624,155.029,109.038)
C4: (113.241,155.932,108.061)
P: (109.021,151.861,106.806)
C4': (109.102,155.637,105.794)
C2': (111.313,155.147,105.093)
C2: (114.883,157.307,108.563)
N1: (115.365,156.530,109.542)
N3: (113.836,157.107,107.769)
N6: (115.219,154.592,110.792)
N7: (112.782,153.926,109.048)
N9: (112.133,155.381,107.461)
O5': (109.382,153.277,106.193)
O3': (109.998,156.790,103.886)
Image (generated by PyMOL):