Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0200:0215
Extra
PDB:
ATOM 1 O3' U A 199 56.696 88.935 36.221 1.00 36.59 O
ATOM 2 P A A 200 57.591 88.457 37.471 1.00 38.37 P
ATOM 3 OP1 A A 200 59.002 88.848 37.205 1.00 36.13 O
ATOM 4 OP2 A A 200 57.271 87.036 37.749 1.00 38.31 O
ATOM 5 O5' A A 200 57.019 89.315 38.683 1.00 38.80 O
ATOM 6 C5' A A 200 57.198 88.901 40.048 1.00 35.46 C
ATOM 7 C4' A A 200 57.247 90.113 40.944 1.00 36.26 C
ATOM 8 O4' A A 200 58.453 90.867 40.648 1.00 37.74 O
ATOM 9 C3' A A 200 56.093 91.105 40.796 1.00 35.49 C
ATOM 10 O3' A A 200 55.981 91.799 42.026 1.00 35.44 O
ATOM 11 C2' A A 200 56.651 92.091 39.776 1.00 36.86 C
ATOM 12 O2' A A 200 56.046 93.367 39.824 1.00 35.81 O
ATOM 13 C1' A A 200 58.101 92.179 40.247 1.00 39.20 C
ATOM 14 N9 A A 200 59.064 92.648 39.250 1.00 40.64 N
ATOM 15 C8 A A 200 59.645 91.949 38.224 1.00 40.58 C
ATOM 16 N7 A A 200 60.491 92.655 37.516 1.00 41.37 N
ATOM 17 C5 A A 200 60.460 93.907 38.111 1.00 41.72 C
ATOM 18 C6 A A 200 61.134 95.110 37.825 1.00 42.15 C
ATOM 19 N6 A A 200 62.006 95.255 36.819 1.00 39.96 N
ATOM 20 N1 A A 200 60.876 96.174 38.617 1.00 42.33 N
ATOM 21 C2 A A 200 60.002 96.030 39.619 1.00 41.21 C
ATOM 22 N3 A A 200 59.307 94.957 39.984 1.00 40.49 N
ATOM 23 C4 A A 200 59.584 93.918 39.180 1.00 41.34 C
ATOM 24 P G A 201 54.652 91.687 42.913 1.00 36.92 P
ATOM 25 OP1 G A 201 54.419 90.256 43.255 1.00 35.32 O
ATOM 26 OP2 G A 201 53.585 92.469 42.239 1.00 34.35 O
ATOM 27 O5' G A 201 55.077 92.464 44.238 1.00 35.53 O
TER
ATOM 1 O3' A B 214 65.191 98.303 36.166 1.00 32.53 O
ATOM 2 P A B 215 64.252 98.197 34.877 1.00 34.23 P
ATOM 3 OP1 A B 215 64.240 99.533 34.227 1.00 33.49 O
ATOM 4 OP2 A B 215 62.974 97.585 35.303 1.00 36.07 O
ATOM 5 O5' A B 215 65.000 97.150 33.947 1.00 31.54 O
ATOM 6 C5' A B 215 66.370 97.323 33.601 1.00 34.78 C
ATOM 7 C4' A B 215 66.893 96.068 32.962 1.00 39.59 C
ATOM 8 O4' A B 215 66.903 95.005 33.950 1.00 42.78 O
ATOM 9 C3' A B 215 66.054 95.513 31.821 1.00 39.88 C
ATOM 10 O3' A B 215 66.342 96.154 30.582 1.00 40.10 O
ATOM 11 C2' A B 215 66.449 94.044 31.833 1.00 41.33 C
ATOM 12 O2' A B 215 67.721 93.813 31.266 1.00 41.12 O
ATOM 13 C1' A B 215 66.528 93.783 33.337 1.00 42.99 C
ATOM 14 N9 A B 215 65.240 93.377 33.902 1.00 45.05 N
ATOM 15 C8 A B 215 64.302 94.165 34.529 1.00 44.96 C
ATOM 16 N7 A B 215 63.254 93.505 34.951 1.00 44.75 N
ATOM 17 C5 A B 215 63.515 92.193 34.576 1.00 45.34 C
ATOM 18 C6 A B 215 62.795 91.001 34.744 1.00 45.45 C
ATOM 19 N6 A B 215 61.620 90.928 35.375 1.00 45.27 N
ATOM 20 N1 A B 215 63.331 89.870 34.240 1.00 44.74 N
ATOM 21 C2 A B 215 64.508 89.942 33.615 1.00 44.23 C
ATOM 22 N3 A B 215 65.282 90.995 33.400 1.00 43.93 N
ATOM 23 C4 A B 215 64.726 92.103 33.915 1.00 45.04 C
ATOM 24 P C B 216 65.221 96.215 29.434 1.00 39.69 P
ATOM 25 OP1 C B 216 65.722 97.147 28.402 1.00 41.12 O
ATOM 26 OP2 C B 216 63.885 96.452 30.042 1.00 37.81 O
ATOM 27 O5' C B 216 65.232 94.745 28.822 1.00 41.47 O
TER
ATOM 2 P A A 200 57.591 88.457 37.471 1.00 38.37 P
ATOM 3 OP1 A A 200 59.002 88.848 37.205 1.00 36.13 O
ATOM 4 OP2 A A 200 57.271 87.036 37.749 1.00 38.31 O
ATOM 5 O5' A A 200 57.019 89.315 38.683 1.00 38.80 O
ATOM 6 C5' A A 200 57.198 88.901 40.048 1.00 35.46 C
ATOM 7 C4' A A 200 57.247 90.113 40.944 1.00 36.26 C
ATOM 8 O4' A A 200 58.453 90.867 40.648 1.00 37.74 O
ATOM 9 C3' A A 200 56.093 91.105 40.796 1.00 35.49 C
ATOM 10 O3' A A 200 55.981 91.799 42.026 1.00 35.44 O
ATOM 11 C2' A A 200 56.651 92.091 39.776 1.00 36.86 C
ATOM 12 O2' A A 200 56.046 93.367 39.824 1.00 35.81 O
ATOM 13 C1' A A 200 58.101 92.179 40.247 1.00 39.20 C
ATOM 14 N9 A A 200 59.064 92.648 39.250 1.00 40.64 N
ATOM 15 C8 A A 200 59.645 91.949 38.224 1.00 40.58 C
ATOM 16 N7 A A 200 60.491 92.655 37.516 1.00 41.37 N
ATOM 17 C5 A A 200 60.460 93.907 38.111 1.00 41.72 C
ATOM 18 C6 A A 200 61.134 95.110 37.825 1.00 42.15 C
ATOM 19 N6 A A 200 62.006 95.255 36.819 1.00 39.96 N
ATOM 20 N1 A A 200 60.876 96.174 38.617 1.00 42.33 N
ATOM 21 C2 A A 200 60.002 96.030 39.619 1.00 41.21 C
ATOM 22 N3 A A 200 59.307 94.957 39.984 1.00 40.49 N
ATOM 23 C4 A A 200 59.584 93.918 39.180 1.00 41.34 C
ATOM 24 P G A 201 54.652 91.687 42.913 1.00 36.92 P
ATOM 25 OP1 G A 201 54.419 90.256 43.255 1.00 35.32 O
ATOM 26 OP2 G A 201 53.585 92.469 42.239 1.00 34.35 O
ATOM 27 O5' G A 201 55.077 92.464 44.238 1.00 35.53 O
TER
ATOM 1 O3' A B 214 65.191 98.303 36.166 1.00 32.53 O
ATOM 2 P A B 215 64.252 98.197 34.877 1.00 34.23 P
ATOM 3 OP1 A B 215 64.240 99.533 34.227 1.00 33.49 O
ATOM 4 OP2 A B 215 62.974 97.585 35.303 1.00 36.07 O
ATOM 5 O5' A B 215 65.000 97.150 33.947 1.00 31.54 O
ATOM 6 C5' A B 215 66.370 97.323 33.601 1.00 34.78 C
ATOM 7 C4' A B 215 66.893 96.068 32.962 1.00 39.59 C
ATOM 8 O4' A B 215 66.903 95.005 33.950 1.00 42.78 O
ATOM 9 C3' A B 215 66.054 95.513 31.821 1.00 39.88 C
ATOM 10 O3' A B 215 66.342 96.154 30.582 1.00 40.10 O
ATOM 11 C2' A B 215 66.449 94.044 31.833 1.00 41.33 C
ATOM 12 O2' A B 215 67.721 93.813 31.266 1.00 41.12 O
ATOM 13 C1' A B 215 66.528 93.783 33.337 1.00 42.99 C
ATOM 14 N9 A B 215 65.240 93.377 33.902 1.00 45.05 N
ATOM 15 C8 A B 215 64.302 94.165 34.529 1.00 44.96 C
ATOM 16 N7 A B 215 63.254 93.505 34.951 1.00 44.75 N
ATOM 17 C5 A B 215 63.515 92.193 34.576 1.00 45.34 C
ATOM 18 C6 A B 215 62.795 91.001 34.744 1.00 45.45 C
ATOM 19 N6 A B 215 61.620 90.928 35.375 1.00 45.27 N
ATOM 20 N1 A B 215 63.331 89.870 34.240 1.00 44.74 N
ATOM 21 C2 A B 215 64.508 89.942 33.615 1.00 44.23 C
ATOM 22 N3 A B 215 65.282 90.995 33.400 1.00 43.93 N
ATOM 23 C4 A B 215 64.726 92.103 33.915 1.00 45.04 C
ATOM 24 P C B 216 65.221 96.215 29.434 1.00 39.69 P
ATOM 25 OP1 C B 216 65.722 97.147 28.402 1.00 41.12 O
ATOM 26 OP2 C B 216 63.885 96.452 30.042 1.00 37.81 O
ATOM 27 O5' C B 216 65.232 94.745 28.822 1.00 41.47 O
TER
Atoms:
OP1: (59.002,88.848,37.205)
OP2: (57.271,87.036,37.749)
C3': (56.093,91.105,40.796)
C1': (58.101,92.179,40.247)
C5': (57.198,88.901,40.048)
O4': (58.453,90.867,40.648)
C8: (59.645,91.949,38.224)
O2': (56.046,93.367,39.824)
C6: (61.134,95.110,37.825)
C5: (60.460,93.907,38.111)
C4: (59.584,93.918,39.180)
P: (57.591,88.457,37.471)
C4': (57.247,90.113,40.944)
C2': (56.651,92.091,39.776)
C2: (60.002,96.030,39.619)
N1: (60.876,96.174,38.617)
N3: (59.307,94.957,39.984)
N6: (62.006,95.255,36.819)
N7: (60.491,92.655,37.516)
N9: (59.064,92.648,39.250)
O5': (57.019,89.315,38.683)
O3': (55.981,91.799,42.026)
OP2: (57.271,87.036,37.749)
C3': (56.093,91.105,40.796)
C1': (58.101,92.179,40.247)
C5': (57.198,88.901,40.048)
O4': (58.453,90.867,40.648)
C8: (59.645,91.949,38.224)
O2': (56.046,93.367,39.824)
C6: (61.134,95.110,37.825)
C5: (60.460,93.907,38.111)
C4: (59.584,93.918,39.180)
P: (57.591,88.457,37.471)
C4': (57.247,90.113,40.944)
C2': (56.651,92.091,39.776)
C2: (60.002,96.030,39.619)
N1: (60.876,96.174,38.617)
N3: (59.307,94.957,39.984)
N6: (62.006,95.255,36.819)
N7: (60.491,92.655,37.516)
N9: (59.064,92.648,39.250)
O5': (57.019,89.315,38.683)
O3': (55.981,91.799,42.026)
OP1: (64.240,99.533,34.227)
OP2: (62.974,97.585,35.303)
C3': (66.054,95.513,31.821)
C1': (66.528,93.783,33.337)
C5': (66.370,97.323,33.601)
O4': (66.903,95.005,33.950)
C8: (64.302,94.165,34.529)
O2': (67.721,93.813,31.266)
C6: (62.795,91.001,34.744)
C5: (63.515,92.193,34.576)
C4: (64.726,92.103,33.915)
P: (64.252,98.197,34.877)
C4': (66.893,96.068,32.962)
C2': (66.449,94.044,31.833)
C2: (64.508,89.942,33.615)
N1: (63.331,89.870,34.240)
N3: (65.282,90.995,33.400)
N6: (61.620,90.928,35.375)
N7: (63.254,93.505,34.951)
N9: (65.240,93.377,33.902)
O5': (65.000,97.150,33.947)
O3': (66.342,96.154,30.582)
OP2: (62.974,97.585,35.303)
C3': (66.054,95.513,31.821)
C1': (66.528,93.783,33.337)
C5': (66.370,97.323,33.601)
O4': (66.903,95.005,33.950)
C8: (64.302,94.165,34.529)
O2': (67.721,93.813,31.266)
C6: (62.795,91.001,34.744)
C5: (63.515,92.193,34.576)
C4: (64.726,92.103,33.915)
P: (64.252,98.197,34.877)
C4': (66.893,96.068,32.962)
C2': (66.449,94.044,31.833)
C2: (64.508,89.942,33.615)
N1: (63.331,89.870,34.240)
N3: (65.282,90.995,33.400)
N6: (61.620,90.928,35.375)
N7: (63.254,93.505,34.951)
N9: (65.240,93.377,33.902)
O5': (65.000,97.150,33.947)
O3': (66.342,96.154,30.582)
Image (generated by PyMOL):