Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:V8:V22
Extra
PDB:
ATOM 1 O3' U A 7 -117.703 -6.430 28.791 1.00 56.87 O
ATOM 2 P A A 8 -117.345 -6.346 27.219 1.00 73.91 P
ATOM 3 OP1 A A 8 -117.543 -7.707 26.653 1.00 73.91 O
ATOM 4 OP2 A A 8 -116.003 -5.715 27.109 1.00 73.91 O
ATOM 5 O5' A A 8 -118.456 -5.354 26.639 1.00 73.91 O
ATOM 6 C5' A A 8 -119.803 -5.787 26.443 1.00 73.91 C
ATOM 7 C4' A A 8 -120.418 -5.202 25.187 1.00 73.91 C
ATOM 8 O4' A A 8 -120.398 -3.751 25.267 1.00 73.91 O
ATOM 9 C3' A A 8 -119.718 -5.562 23.877 1.00 73.91 C
ATOM 10 O3' A A 8 -120.691 -5.718 22.843 1.00 73.91 O
ATOM 11 C2' A A 8 -118.870 -4.327 23.598 1.00 73.91 C
ATOM 12 O2' A A 8 -118.536 -4.133 22.244 1.00 73.91 O
ATOM 13 C1' A A 8 -119.779 -3.224 24.112 1.00 73.91 C
ATOM 14 N9 A A 8 -119.076 -2.000 24.488 1.00 74.08 N
ATOM 15 C8 A A 8 -117.743 -1.864 24.782 1.00 74.08 C
ATOM 16 N7 A A 8 -117.402 -0.635 25.089 1.00 74.08 N
ATOM 17 C5 A A 8 -118.583 0.092 24.990 1.00 74.08 C
ATOM 18 C6 A A 8 -118.884 1.454 25.192 1.00 74.08 C
ATOM 19 N6 A A 8 -117.994 2.380 25.555 1.00 74.08 N
ATOM 20 N1 A A 8 -120.159 1.842 25.009 1.00 74.08 N
ATOM 21 C2 A A 8 -121.060 0.924 24.647 1.00 74.08 C
ATOM 22 N3 A A 8 -120.899 -0.380 24.433 1.00 74.08 N
ATOM 23 C4 A A 8 -119.621 -0.741 24.619 1.00 74.08 C
ATOM 24 P G A 9 -121.399 -7.146 22.594 1.00 88.39 P
ATOM 25 OP1 G A 9 -122.825 -6.878 22.275 1.00 88.39 O
ATOM 26 OP2 G A 9 -121.079 -8.010 23.758 1.00 88.39 O
ATOM 27 O5' G A 9 -120.650 -7.683 21.301 1.00 88.39 O
TER
ATOM 1 O3' G B 21 -117.987 7.533 26.448 1.00 90.73 O
ATOM 2 P A B 22 -117.989 7.237 24.871 1.00 88.39 P
ATOM 3 OP1 A B 22 -118.539 8.443 24.204 1.00 88.39 O
ATOM 4 OP2 A B 22 -118.679 5.930 24.673 1.00 88.39 O
ATOM 5 O5' A B 22 -116.431 7.092 24.533 1.00 88.39 O
ATOM 6 C5' A B 22 -115.497 8.105 24.906 1.00 88.39 C
ATOM 7 C4' A B 22 -114.065 7.622 24.781 1.00 88.39 C
ATOM 8 O4' A B 22 -113.844 6.495 25.671 1.00 88.39 O
ATOM 9 C3' A B 22 -113.648 7.113 23.407 1.00 88.39 C
ATOM 10 O3' A B 22 -113.261 8.161 22.529 1.00 88.39 O
ATOM 11 C2' A B 22 -112.520 6.129 23.726 1.00 88.39 C
ATOM 12 O2' A B 22 -111.276 6.801 23.886 1.00 88.39 O
ATOM 13 C1' A B 22 -112.958 5.568 25.079 1.00 88.39 C
ATOM 14 N9 A B 22 -113.657 4.281 24.948 1.00 87.10 N
ATOM 15 C8 A B 22 -114.968 4.029 25.254 1.00 87.10 C
ATOM 16 N7 A B 22 -115.325 2.791 25.049 1.00 87.10 N
ATOM 17 C5 A B 22 -114.168 2.186 24.580 1.00 87.10 C
ATOM 18 C6 A B 22 -113.889 0.868 24.181 1.00 87.10 C
ATOM 19 N6 A B 22 -114.796 -0.113 24.190 1.00 87.10 N
ATOM 20 N1 A B 22 -112.634 0.593 23.765 1.00 87.10 N
ATOM 21 C2 A B 22 -111.732 1.583 23.758 1.00 87.10 C
ATOM 22 N3 A B 22 -111.879 2.857 24.111 1.00 87.10 N
ATOM 23 C4 A B 22 -113.132 3.094 24.518 1.00 87.10 C
ATOM 24 P G B 23 -113.569 8.061 20.956 1.00 86.60 P
ATOM 25 OP1 G B 23 -113.193 9.357 20.357 1.00 86.60 O
ATOM 26 OP2 G B 23 -114.971 7.592 20.817 1.00 86.60 O
ATOM 27 O5' G B 23 -112.561 6.920 20.463 1.00 86.60 O
TER
ATOM 2 P A A 8 -117.345 -6.346 27.219 1.00 73.91 P
ATOM 3 OP1 A A 8 -117.543 -7.707 26.653 1.00 73.91 O
ATOM 4 OP2 A A 8 -116.003 -5.715 27.109 1.00 73.91 O
ATOM 5 O5' A A 8 -118.456 -5.354 26.639 1.00 73.91 O
ATOM 6 C5' A A 8 -119.803 -5.787 26.443 1.00 73.91 C
ATOM 7 C4' A A 8 -120.418 -5.202 25.187 1.00 73.91 C
ATOM 8 O4' A A 8 -120.398 -3.751 25.267 1.00 73.91 O
ATOM 9 C3' A A 8 -119.718 -5.562 23.877 1.00 73.91 C
ATOM 10 O3' A A 8 -120.691 -5.718 22.843 1.00 73.91 O
ATOM 11 C2' A A 8 -118.870 -4.327 23.598 1.00 73.91 C
ATOM 12 O2' A A 8 -118.536 -4.133 22.244 1.00 73.91 O
ATOM 13 C1' A A 8 -119.779 -3.224 24.112 1.00 73.91 C
ATOM 14 N9 A A 8 -119.076 -2.000 24.488 1.00 74.08 N
ATOM 15 C8 A A 8 -117.743 -1.864 24.782 1.00 74.08 C
ATOM 16 N7 A A 8 -117.402 -0.635 25.089 1.00 74.08 N
ATOM 17 C5 A A 8 -118.583 0.092 24.990 1.00 74.08 C
ATOM 18 C6 A A 8 -118.884 1.454 25.192 1.00 74.08 C
ATOM 19 N6 A A 8 -117.994 2.380 25.555 1.00 74.08 N
ATOM 20 N1 A A 8 -120.159 1.842 25.009 1.00 74.08 N
ATOM 21 C2 A A 8 -121.060 0.924 24.647 1.00 74.08 C
ATOM 22 N3 A A 8 -120.899 -0.380 24.433 1.00 74.08 N
ATOM 23 C4 A A 8 -119.621 -0.741 24.619 1.00 74.08 C
ATOM 24 P G A 9 -121.399 -7.146 22.594 1.00 88.39 P
ATOM 25 OP1 G A 9 -122.825 -6.878 22.275 1.00 88.39 O
ATOM 26 OP2 G A 9 -121.079 -8.010 23.758 1.00 88.39 O
ATOM 27 O5' G A 9 -120.650 -7.683 21.301 1.00 88.39 O
TER
ATOM 1 O3' G B 21 -117.987 7.533 26.448 1.00 90.73 O
ATOM 2 P A B 22 -117.989 7.237 24.871 1.00 88.39 P
ATOM 3 OP1 A B 22 -118.539 8.443 24.204 1.00 88.39 O
ATOM 4 OP2 A B 22 -118.679 5.930 24.673 1.00 88.39 O
ATOM 5 O5' A B 22 -116.431 7.092 24.533 1.00 88.39 O
ATOM 6 C5' A B 22 -115.497 8.105 24.906 1.00 88.39 C
ATOM 7 C4' A B 22 -114.065 7.622 24.781 1.00 88.39 C
ATOM 8 O4' A B 22 -113.844 6.495 25.671 1.00 88.39 O
ATOM 9 C3' A B 22 -113.648 7.113 23.407 1.00 88.39 C
ATOM 10 O3' A B 22 -113.261 8.161 22.529 1.00 88.39 O
ATOM 11 C2' A B 22 -112.520 6.129 23.726 1.00 88.39 C
ATOM 12 O2' A B 22 -111.276 6.801 23.886 1.00 88.39 O
ATOM 13 C1' A B 22 -112.958 5.568 25.079 1.00 88.39 C
ATOM 14 N9 A B 22 -113.657 4.281 24.948 1.00 87.10 N
ATOM 15 C8 A B 22 -114.968 4.029 25.254 1.00 87.10 C
ATOM 16 N7 A B 22 -115.325 2.791 25.049 1.00 87.10 N
ATOM 17 C5 A B 22 -114.168 2.186 24.580 1.00 87.10 C
ATOM 18 C6 A B 22 -113.889 0.868 24.181 1.00 87.10 C
ATOM 19 N6 A B 22 -114.796 -0.113 24.190 1.00 87.10 N
ATOM 20 N1 A B 22 -112.634 0.593 23.765 1.00 87.10 N
ATOM 21 C2 A B 22 -111.732 1.583 23.758 1.00 87.10 C
ATOM 22 N3 A B 22 -111.879 2.857 24.111 1.00 87.10 N
ATOM 23 C4 A B 22 -113.132 3.094 24.518 1.00 87.10 C
ATOM 24 P G B 23 -113.569 8.061 20.956 1.00 86.60 P
ATOM 25 OP1 G B 23 -113.193 9.357 20.357 1.00 86.60 O
ATOM 26 OP2 G B 23 -114.971 7.592 20.817 1.00 86.60 O
ATOM 27 O5' G B 23 -112.561 6.920 20.463 1.00 86.60 O
TER
Atoms:
OP1: (-117.543,-7.707,26.653)
OP2: (-116.003,-5.715,27.109)
C3': (-119.718,-5.562,23.877)
C1': (-119.779,-3.224,24.112)
C5': (-119.803,-5.787,26.443)
O4': (-120.398,-3.751,25.267)
C8: (-117.743,-1.864,24.782)
O2': (-118.536,-4.133,22.244)
C6: (-118.884,1.454,25.192)
C5: (-118.583,0.092,24.990)
C4: (-119.621,-0.741,24.619)
P: (-117.345,-6.346,27.219)
C4': (-120.418,-5.202,25.187)
C2': (-118.870,-4.327,23.598)
C2: (-121.060,0.924,24.647)
N1: (-120.159,1.842,25.009)
N3: (-120.899,-0.380,24.433)
N6: (-117.994,2.380,25.555)
N7: (-117.402,-0.635,25.089)
N9: (-119.076,-2.000,24.488)
O5': (-118.456,-5.354,26.639)
O3': (-120.691,-5.718,22.843)
OP2: (-116.003,-5.715,27.109)
C3': (-119.718,-5.562,23.877)
C1': (-119.779,-3.224,24.112)
C5': (-119.803,-5.787,26.443)
O4': (-120.398,-3.751,25.267)
C8: (-117.743,-1.864,24.782)
O2': (-118.536,-4.133,22.244)
C6: (-118.884,1.454,25.192)
C5: (-118.583,0.092,24.990)
C4: (-119.621,-0.741,24.619)
P: (-117.345,-6.346,27.219)
C4': (-120.418,-5.202,25.187)
C2': (-118.870,-4.327,23.598)
C2: (-121.060,0.924,24.647)
N1: (-120.159,1.842,25.009)
N3: (-120.899,-0.380,24.433)
N6: (-117.994,2.380,25.555)
N7: (-117.402,-0.635,25.089)
N9: (-119.076,-2.000,24.488)
O5': (-118.456,-5.354,26.639)
O3': (-120.691,-5.718,22.843)
OP1: (-118.539,8.443,24.204)
OP2: (-118.679,5.930,24.673)
C3': (-113.648,7.113,23.407)
C1': (-112.958,5.568,25.079)
C5': (-115.497,8.105,24.906)
O4': (-113.844,6.495,25.671)
C8: (-114.968,4.029,25.254)
O2': (-111.276,6.801,23.886)
C6: (-113.889,0.868,24.181)
C5: (-114.168,2.186,24.580)
C4: (-113.132,3.094,24.518)
P: (-117.989,7.237,24.871)
C4': (-114.065,7.622,24.781)
C2': (-112.520,6.129,23.726)
C2: (-111.732,1.583,23.758)
N1: (-112.634,0.593,23.765)
N3: (-111.879,2.857,24.111)
N6: (-114.796,-0.113,24.190)
N7: (-115.325,2.791,25.049)
N9: (-113.657,4.281,24.948)
O5': (-116.431,7.092,24.533)
O3': (-113.261,8.161,22.529)
OP2: (-118.679,5.930,24.673)
C3': (-113.648,7.113,23.407)
C1': (-112.958,5.568,25.079)
C5': (-115.497,8.105,24.906)
O4': (-113.844,6.495,25.671)
C8: (-114.968,4.029,25.254)
O2': (-111.276,6.801,23.886)
C6: (-113.889,0.868,24.181)
C5: (-114.168,2.186,24.580)
C4: (-113.132,3.094,24.518)
P: (-117.989,7.237,24.871)
C4': (-114.065,7.622,24.781)
C2': (-112.520,6.129,23.726)
C2: (-111.732,1.583,23.758)
N1: (-112.634,0.593,23.765)
N3: (-111.879,2.857,24.111)
N6: (-114.796,-0.113,24.190)
N7: (-115.325,2.791,25.049)
N9: (-113.657,4.281,24.948)
O5': (-116.431,7.092,24.533)
O3': (-113.261,8.161,22.529)
Image (generated by PyMOL):