Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A476:A500
Extra
PDB:
ATOM 1 O3' G A 475 -36.901-104.697 37.666 1.00 0.01 O
ATOM 2 P A A 476 -37.723-104.719 39.037 1.00 0.01 P
ATOM 3 OP1 A A 476 -37.867-106.124 39.455 1.00 0.01 O
ATOM 4 OP2 A A 476 -38.936-103.912 38.839 1.00 0.01 O
ATOM 5 O5' A A 476 -36.739-103.975 40.020 1.00 0.01 O
ATOM 6 C5' A A 476 -37.088-103.743 41.369 1.00 0.01 C
ATOM 7 C4' A A 476 -36.044-104.288 42.317 1.00 0.01 C
ATOM 8 O4' A A 476 -35.968-105.721 42.189 1.00 0.01 O
ATOM 9 C3' A A 476 -34.620-103.816 42.104 1.00 0.01 C
ATOM 10 O3' A A 476 -34.397-102.568 42.698 1.00 0.01 O
ATOM 11 C2' A A 476 -33.811-104.937 42.744 1.00 0.01 C
ATOM 12 O2' A A 476 -33.795-104.812 44.153 1.00 0.01 O
ATOM 13 C1' A A 476 -34.652-106.152 42.421 1.00 0.01 C
ATOM 14 N9 A A 476 -34.193-106.888 41.240 1.00 0.01 N
ATOM 15 C8 A A 476 -34.902-107.007 40.095 1.00 0.01 C
ATOM 16 N7 A A 476 -34.343-107.768 39.206 1.00 0.01 N
ATOM 17 C5 A A 476 -33.209-108.197 39.840 1.00 0.01 C
ATOM 18 C6 A A 476 -32.206-109.049 39.395 1.00 0.01 C
ATOM 19 N6 A A 476 -32.235-109.597 38.172 1.00 0.01 N
ATOM 20 N1 A A 476 -31.188-109.309 40.223 1.00 0.01 N
ATOM 21 C2 A A 476 -31.250-108.715 41.406 1.00 0.01 C
ATOM 22 N3 A A 476 -32.151-107.897 41.936 1.00 0.01 N
ATOM 23 C4 A A 476 -33.116-107.681 41.087 1.00 0.01 C
ATOM 24 P A A 477 -33.767-101.357 41.881 1.00 0.01 P
ATOM 25 OP1 A A 477 -34.072-100.136 42.616 1.00 0.01 O
ATOM 26 OP2 A A 477 -34.206-101.464 40.505 1.00 0.01 O
ATOM 27 O5' A A 477 -32.229-101.649 41.989 1.00 0.01 O
TER
ATOM 1 O3' G B 499 -30.770-111.492 36.446 1.00 0.01 O
ATOM 2 P A B 500 -30.972-113.045 36.697 1.00 0.01 P
ATOM 3 OP1 A B 500 -31.278-113.223 38.117 1.00 0.01 O
ATOM 4 OP2 A B 500 -29.799-113.727 36.129 1.00 0.01 O
ATOM 5 O5' A B 500 -32.244-113.357 35.832 1.00 0.01 O
ATOM 6 C5' A B 500 -32.549-114.673 35.446 1.00 0.01 C
ATOM 7 C4' A B 500 -33.929-114.753 34.864 1.00 0.01 C
ATOM 8 O4' A B 500 -34.889-114.347 35.850 1.00 0.01 O
ATOM 9 C3' A B 500 -34.202-113.855 33.678 1.00 0.01 C
ATOM 10 O3' A B 500 -33.787-114.439 32.467 1.00 0.01 O
ATOM 11 C2' A B 500 -35.692-113.671 33.755 1.00 0.01 C
ATOM 12 O2' A B 500 -36.353-114.825 33.257 1.00 0.01 O
ATOM 13 C1' A B 500 -35.906-113.618 35.251 1.00 0.01 C
ATOM 14 N9 A B 500 -35.855-112.263 35.796 1.00 0.01 N
ATOM 15 C8 A B 500 -34.929-111.804 36.682 1.00 0.01 C
ATOM 16 N7 A B 500 -35.138-110.587 37.094 1.00 0.01 N
ATOM 17 C5 A B 500 -36.302-110.236 36.443 1.00 0.01 C
ATOM 18 C6 A B 500 -37.036-109.065 36.472 1.00 0.01 C
ATOM 19 N6 A B 500 -36.734-107.970 37.171 1.00 0.01 N
ATOM 20 N1 A B 500 -38.115-109.053 35.724 1.00 0.01 N
ATOM 21 C2 A B 500 -38.423-110.133 35.012 1.00 0.01 C
ATOM 22 N3 A B 500 -37.841-111.307 34.895 1.00 0.01 N
ATOM 23 C4 A B 500 -36.760-111.266 35.660 1.00 0.01 C
ATOM 24 P A B 501 -33.041-113.558 31.373 1.00 0.05 P
ATOM 25 OP1 A B 501 -32.585-114.467 30.304 1.00 0.05 O
ATOM 26 OP2 A B 501 -32.035-112.768 32.085 1.00 0.05 O
ATOM 27 O5' A B 501 -34.220-112.630 30.835 1.00 0.05 O
TER
ATOM 2 P A A 476 -37.723-104.719 39.037 1.00 0.01 P
ATOM 3 OP1 A A 476 -37.867-106.124 39.455 1.00 0.01 O
ATOM 4 OP2 A A 476 -38.936-103.912 38.839 1.00 0.01 O
ATOM 5 O5' A A 476 -36.739-103.975 40.020 1.00 0.01 O
ATOM 6 C5' A A 476 -37.088-103.743 41.369 1.00 0.01 C
ATOM 7 C4' A A 476 -36.044-104.288 42.317 1.00 0.01 C
ATOM 8 O4' A A 476 -35.968-105.721 42.189 1.00 0.01 O
ATOM 9 C3' A A 476 -34.620-103.816 42.104 1.00 0.01 C
ATOM 10 O3' A A 476 -34.397-102.568 42.698 1.00 0.01 O
ATOM 11 C2' A A 476 -33.811-104.937 42.744 1.00 0.01 C
ATOM 12 O2' A A 476 -33.795-104.812 44.153 1.00 0.01 O
ATOM 13 C1' A A 476 -34.652-106.152 42.421 1.00 0.01 C
ATOM 14 N9 A A 476 -34.193-106.888 41.240 1.00 0.01 N
ATOM 15 C8 A A 476 -34.902-107.007 40.095 1.00 0.01 C
ATOM 16 N7 A A 476 -34.343-107.768 39.206 1.00 0.01 N
ATOM 17 C5 A A 476 -33.209-108.197 39.840 1.00 0.01 C
ATOM 18 C6 A A 476 -32.206-109.049 39.395 1.00 0.01 C
ATOM 19 N6 A A 476 -32.235-109.597 38.172 1.00 0.01 N
ATOM 20 N1 A A 476 -31.188-109.309 40.223 1.00 0.01 N
ATOM 21 C2 A A 476 -31.250-108.715 41.406 1.00 0.01 C
ATOM 22 N3 A A 476 -32.151-107.897 41.936 1.00 0.01 N
ATOM 23 C4 A A 476 -33.116-107.681 41.087 1.00 0.01 C
ATOM 24 P A A 477 -33.767-101.357 41.881 1.00 0.01 P
ATOM 25 OP1 A A 477 -34.072-100.136 42.616 1.00 0.01 O
ATOM 26 OP2 A A 477 -34.206-101.464 40.505 1.00 0.01 O
ATOM 27 O5' A A 477 -32.229-101.649 41.989 1.00 0.01 O
TER
ATOM 1 O3' G B 499 -30.770-111.492 36.446 1.00 0.01 O
ATOM 2 P A B 500 -30.972-113.045 36.697 1.00 0.01 P
ATOM 3 OP1 A B 500 -31.278-113.223 38.117 1.00 0.01 O
ATOM 4 OP2 A B 500 -29.799-113.727 36.129 1.00 0.01 O
ATOM 5 O5' A B 500 -32.244-113.357 35.832 1.00 0.01 O
ATOM 6 C5' A B 500 -32.549-114.673 35.446 1.00 0.01 C
ATOM 7 C4' A B 500 -33.929-114.753 34.864 1.00 0.01 C
ATOM 8 O4' A B 500 -34.889-114.347 35.850 1.00 0.01 O
ATOM 9 C3' A B 500 -34.202-113.855 33.678 1.00 0.01 C
ATOM 10 O3' A B 500 -33.787-114.439 32.467 1.00 0.01 O
ATOM 11 C2' A B 500 -35.692-113.671 33.755 1.00 0.01 C
ATOM 12 O2' A B 500 -36.353-114.825 33.257 1.00 0.01 O
ATOM 13 C1' A B 500 -35.906-113.618 35.251 1.00 0.01 C
ATOM 14 N9 A B 500 -35.855-112.263 35.796 1.00 0.01 N
ATOM 15 C8 A B 500 -34.929-111.804 36.682 1.00 0.01 C
ATOM 16 N7 A B 500 -35.138-110.587 37.094 1.00 0.01 N
ATOM 17 C5 A B 500 -36.302-110.236 36.443 1.00 0.01 C
ATOM 18 C6 A B 500 -37.036-109.065 36.472 1.00 0.01 C
ATOM 19 N6 A B 500 -36.734-107.970 37.171 1.00 0.01 N
ATOM 20 N1 A B 500 -38.115-109.053 35.724 1.00 0.01 N
ATOM 21 C2 A B 500 -38.423-110.133 35.012 1.00 0.01 C
ATOM 22 N3 A B 500 -37.841-111.307 34.895 1.00 0.01 N
ATOM 23 C4 A B 500 -36.760-111.266 35.660 1.00 0.01 C
ATOM 24 P A B 501 -33.041-113.558 31.373 1.00 0.05 P
ATOM 25 OP1 A B 501 -32.585-114.467 30.304 1.00 0.05 O
ATOM 26 OP2 A B 501 -32.035-112.768 32.085 1.00 0.05 O
ATOM 27 O5' A B 501 -34.220-112.630 30.835 1.00 0.05 O
TER
Atoms:
OP1: (-37.867,-106.124,39.455)
OP2: (-38.936,-103.912,38.839)
C3': (-34.620,-103.816,42.104)
C1': (-34.652,-106.152,42.421)
C5': (-37.088,-103.743,41.369)
O4': (-35.968,-105.721,42.189)
C8: (-34.902,-107.007,40.095)
O2': (-33.795,-104.812,44.153)
C6: (-32.206,-109.049,39.395)
C5: (-33.209,-108.197,39.840)
C4: (-33.116,-107.681,41.087)
P: (-37.723,-104.719,39.037)
C4': (-36.044,-104.288,42.317)
C2': (-33.811,-104.937,42.744)
C2: (-31.250,-108.715,41.406)
N1: (-31.188,-109.309,40.223)
N3: (-32.151,-107.897,41.936)
N6: (-32.235,-109.597,38.172)
N7: (-34.343,-107.768,39.206)
N9: (-34.193,-106.888,41.240)
O5': (-36.739,-103.975,40.020)
O3': (-34.397,-102.568,42.698)
OP2: (-38.936,-103.912,38.839)
C3': (-34.620,-103.816,42.104)
C1': (-34.652,-106.152,42.421)
C5': (-37.088,-103.743,41.369)
O4': (-35.968,-105.721,42.189)
C8: (-34.902,-107.007,40.095)
O2': (-33.795,-104.812,44.153)
C6: (-32.206,-109.049,39.395)
C5: (-33.209,-108.197,39.840)
C4: (-33.116,-107.681,41.087)
P: (-37.723,-104.719,39.037)
C4': (-36.044,-104.288,42.317)
C2': (-33.811,-104.937,42.744)
C2: (-31.250,-108.715,41.406)
N1: (-31.188,-109.309,40.223)
N3: (-32.151,-107.897,41.936)
N6: (-32.235,-109.597,38.172)
N7: (-34.343,-107.768,39.206)
N9: (-34.193,-106.888,41.240)
O5': (-36.739,-103.975,40.020)
O3': (-34.397,-102.568,42.698)
OP1: (-31.278,-113.223,38.117)
OP2: (-29.799,-113.727,36.129)
C3': (-34.202,-113.855,33.678)
C1': (-35.906,-113.618,35.251)
C5': (-32.549,-114.673,35.446)
O4': (-34.889,-114.347,35.850)
C8: (-34.929,-111.804,36.682)
O2': (-36.353,-114.825,33.257)
C6: (-37.036,-109.065,36.472)
C5: (-36.302,-110.236,36.443)
C4: (-36.760,-111.266,35.660)
P: (-30.972,-113.045,36.697)
C4': (-33.929,-114.753,34.864)
C2': (-35.692,-113.671,33.755)
C2: (-38.423,-110.133,35.012)
N1: (-38.115,-109.053,35.724)
N3: (-37.841,-111.307,34.895)
N6: (-36.734,-107.970,37.171)
N7: (-35.138,-110.587,37.094)
N9: (-35.855,-112.263,35.796)
O5': (-32.244,-113.357,35.832)
O3': (-33.787,-114.439,32.467)
OP2: (-29.799,-113.727,36.129)
C3': (-34.202,-113.855,33.678)
C1': (-35.906,-113.618,35.251)
C5': (-32.549,-114.673,35.446)
O4': (-34.889,-114.347,35.850)
C8: (-34.929,-111.804,36.682)
O2': (-36.353,-114.825,33.257)
C6: (-37.036,-109.065,36.472)
C5: (-36.302,-110.236,36.443)
C4: (-36.760,-111.266,35.660)
P: (-30.972,-113.045,36.697)
C4': (-33.929,-114.753,34.864)
C2': (-35.692,-113.671,33.755)
C2: (-38.423,-110.133,35.012)
N1: (-38.115,-109.053,35.724)
N3: (-37.841,-111.307,34.895)
N6: (-36.734,-107.970,37.171)
N7: (-35.138,-110.587,37.094)
N9: (-35.855,-112.263,35.796)
O5': (-32.244,-113.357,35.832)
O3': (-33.787,-114.439,32.467)
Image (generated by PyMOL):