ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5D:11390:12164

Extra

PDB:
ATOM 1 O3' U A1389 50.764 27.087 67.236 1.00 38.90 O
ATOM 2 P A A1390 50.959 28.590 66.720 1.00 38.16 P
ATOM 3 OP1 A A1390 49.618 29.114 66.483 1.00 38.24 O
ATOM 4 OP2 A A1390 51.904 28.552 65.579 1.00 38.14 O
ATOM 5 O5' A A1390 51.600 29.354 67.904 1.00 38.39 O
ATOM 6 C5' A A1390 51.994 30.685 67.700 1.00 38.71 C
ATOM 7 C4' A A1390 52.905 31.154 68.783 1.00 38.90 C
ATOM 8 O4' A A1390 52.389 30.690 70.079 1.00 38.83 O
ATOM 9 C3' A A1390 54.335 30.649 68.687 1.00 38.83 C
ATOM 10 O3' A A1390 55.185 31.625 69.258 1.00 39.13 O
ATOM 11 C2' A A1390 54.290 29.455 69.619 1.00 38.58 C
ATOM 12 O2' A A1390 55.541 29.053 70.094 1.00 38.57 O
ATOM 13 C1' A A1390 53.409 30.008 70.742 1.00 38.73 C
ATOM 14 N9 A A1390 52.806 28.999 71.573 1.00 38.52 N
ATOM 15 C8 A A1390 51.797 28.234 71.170 1.00 38.28 C
ATOM 16 N7 A A1390 51.439 27.346 72.060 1.00 38.12 N
ATOM 17 C5 A A1390 52.265 27.576 73.110 1.00 38.27 C
ATOM 18 C6 A A1390 52.338 26.953 74.341 1.00 38.22 C
ATOM 19 N6 A A1390 51.521 25.979 74.649 1.00 38.00 N
ATOM 20 N1 A A1390 53.280 27.355 75.221 1.00 38.42 N
ATOM 21 C2 A A1390 54.057 28.369 74.825 1.00 38.65 C
ATOM 22 N3 A A1390 54.066 29.040 73.670 1.00 38.72 N
ATOM 23 C4 A A1390 53.125 28.596 72.832 1.00 38.52 C
ATOM 24 P G A1391 56.425 32.258 68.465 1.00 35.72 P
ATOM 25 OP1 G A1391 55.924 32.765 67.163 1.00 35.78 O
ATOM 26 OP2 G A1391 57.514 31.268 68.466 1.00 35.53 O
ATOM 27 O5' G A1391 56.804 33.482 69.398 1.00 36.10 O
TER

ATOM 1 O3' A B2163 51.181 24.541 79.562 1.00 36.10 O
ATOM 2 P A B2164 51.615 23.461 78.490 1.00 38.66 P
ATOM 3 OP1 A B2164 52.391 22.421 79.204 1.00 38.56 O
ATOM 4 OP2 A B2164 52.237 24.194 77.399 1.00 38.73 O
ATOM 5 O5' A B2164 50.233 22.878 78.002 1.00 38.45 O
ATOM 6 C5' A B2164 49.327 22.293 78.915 1.00 38.39 C
ATOM 7 C4' A B2164 47.977 22.105 78.290 1.00 38.26 C
ATOM 8 O4' A B2164 47.515 23.353 77.737 1.00 38.45 O
ATOM 9 C3' A B2164 47.906 21.151 77.122 1.00 37.97 C
ATOM 10 O3' A B2164 47.820 19.823 77.528 1.00 37.76 O
ATOM 11 C2' A B2164 46.661 21.604 76.436 1.00 37.97 C
ATOM 12 O2' A B2164 45.559 21.210 77.216 1.00 37.95 O
ATOM 13 C1' A B2164 46.776 23.101 76.573 1.00 38.28 C
ATOM 14 N9 A B2164 47.453 23.739 75.434 1.00 38.33 N
ATOM 15 C8 A B2164 48.651 24.377 75.526 1.00 38.49 C
ATOM 16 N7 A B2164 48.993 24.948 74.417 1.00 38.54 N
ATOM 17 C5 A B2164 47.988 24.698 73.542 1.00 38.40 C
ATOM 18 C6 A B2164 47.865 25.068 72.209 1.00 38.39 C
ATOM 19 N6 A B2164 48.848 25.784 71.645 1.00 38.53 N
ATOM 20 N1 A B2164 46.726 24.691 71.529 1.00 38.26 N
ATOM 21 C2 A B2164 45.834 23.994 72.252 1.00 38.15 C
ATOM 22 N3 A B2164 45.863 23.579 73.558 1.00 38.14 N
ATOM 23 C4 A B2164 46.998 23.968 74.155 1.00 38.27 C
ATOM 24 P A B2165 48.401 18.689 76.578 1.00 40.29 P
ATOM 25 OP1 A B2165 48.651 17.483 77.421 1.00 40.16 O
ATOM 26 OP2 A B2165 49.540 19.299 75.823 1.00 40.37 O
ATOM 27 O5' A B2165 47.203 18.404 75.567 1.00 40.13 O
TER

Atoms:
OP1: (49.618,29.114,66.483)
OP2: (51.904,28.552,65.579)
C3': (54.335,30.649,68.687)
C1': (53.409,30.008,70.742)
C5': (51.994,30.685,67.700)
O4': (52.389,30.690,70.079)
C8: (51.797,28.234,71.170)
O2': (55.541,29.053,70.094)
C6: (52.338,26.953,74.341)
C5: (52.265,27.576,73.110)
C4: (53.125,28.596,72.832)
P: (50.959,28.590,66.720)
C4': (52.905,31.154,68.783)
C2': (54.290,29.455,69.619)
C2: (54.057,28.369,74.825)
N1: (53.280,27.355,75.221)
N3: (54.066,29.040,73.670)
N6: (51.521,25.979,74.649)
N7: (51.439,27.346,72.060)
N9: (52.806,28.999,71.573)
O5': (51.600,29.354,67.904)
O3': (55.185,31.625,69.258)
OP1: (52.391,22.421,79.204)
OP2: (52.237,24.194,77.399)
C3': (47.906,21.151,77.122)
C1': (46.776,23.101,76.573)
C5': (49.327,22.293,78.915)
O4': (47.515,23.353,77.737)
C8: (48.651,24.377,75.526)
O2': (45.559,21.210,77.216)
C6: (47.865,25.068,72.209)
C5: (47.988,24.698,73.542)
C4: (46.998,23.968,74.155)
P: (51.615,23.461,78.490)
C4': (47.977,22.105,78.290)
C2': (46.661,21.604,76.436)
C2: (45.834,23.994,72.252)
N1: (46.726,24.691,71.529)
N3: (45.863,23.579,73.558)
N6: (48.848,25.784,71.645)
N7: (48.993,24.948,74.417)
N9: (47.453,23.739,75.434)
O5': (50.233,22.878,78.002)
O3': (47.820,19.823,77.528)
Image (generated by PyMOL):
PyMOL image
show in jmol