ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:976:9103

Extra

PDB:
ATOM 1 O3' G A 75 44.973 61.685 128.549 1.00 66.55 O
ATOM 2 P A A 76 44.950 63.061 127.701 1.00 66.67 P
ATOM 3 OP1 A A 76 45.600 62.830 126.380 1.00 66.14 O
ATOM 4 OP2 A A 76 45.469 64.128 128.603 1.00 67.04 O
ATOM 5 O5' A A 76 43.414 63.396 127.456 1.00 62.23 O
ATOM 6 C5' A A 76 42.466 62.357 127.264 1.00 60.18 C
ATOM 7 C4' A A 76 41.564 62.677 126.105 1.00 59.69 C
ATOM 8 O4' A A 76 42.336 62.764 124.868 1.00 59.10 O
ATOM 9 C3' A A 76 40.532 61.588 125.870 1.00 60.14 C
ATOM 10 O3' A A 76 39.349 62.170 125.364 1.00 59.62 O
ATOM 11 C2' A A 76 41.199 60.720 124.811 1.00 59.68 C
ATOM 12 O2' A A 76 40.284 59.924 124.081 1.00 61.32 O
ATOM 13 C1' A A 76 41.870 61.790 123.949 1.00 58.10 C
ATOM 14 N9 A A 76 42.997 61.299 123.146 1.00 54.70 N
ATOM 15 C8 A A 76 44.342 61.387 123.410 1.00 53.26 C
ATOM 16 N7 A A 76 45.099 60.842 122.486 1.00 52.30 N
ATOM 17 C5 A A 76 44.191 60.366 121.549 1.00 51.25 C
ATOM 18 C6 A A 76 44.359 59.691 120.325 1.00 51.14 C
ATOM 19 N6 A A 76 45.550 59.374 119.805 1.00 51.18 N
ATOM 20 N1 A A 76 43.248 59.351 119.640 1.00 49.29 N
ATOM 21 C2 A A 76 42.058 59.679 120.151 1.00 49.37 C
ATOM 22 N3 A A 76 41.773 60.316 121.281 1.00 49.13 N
ATOM 23 C4 A A 76 42.896 60.636 121.943 1.00 50.75 C
ATOM 24 P G A 77 37.934 61.715 125.953 1.00 60.11 P
ATOM 25 OP1 G A 77 37.688 62.577 127.139 1.00 57.38 O
ATOM 26 OP2 G A 77 37.940 60.232 126.105 1.00 59.87 O
ATOM 27 O5' G A 77 36.916 62.094 124.786 1.00 57.78 O
TER

ATOM 1 O3' A B 102 46.540 58.670 115.136 1.00 42.79 O
ATOM 2 P A B 103 47.263 57.517 115.969 1.00 42.02 P
ATOM 3 OP1 A B 103 47.582 56.422 115.021 1.00 43.20 O
ATOM 4 OP2 A B 103 46.437 57.239 117.170 1.00 45.15 O
ATOM 5 O5' A B 103 48.609 58.205 116.459 1.00 42.80 O
ATOM 6 C5' A B 103 49.657 58.512 115.531 1.00 44.73 C
ATOM 7 C4' A B 103 50.832 59.102 116.260 1.00 45.33 C
ATOM 8 O4' A B 103 50.473 60.400 116.804 1.00 46.51 O
ATOM 9 C3' A B 103 51.272 58.325 117.483 1.00 45.64 C
ATOM 10 O3' A B 103 52.049 57.193 117.151 1.00 46.30 O
ATOM 11 C2' A B 103 52.035 59.381 118.265 1.00 46.14 C
ATOM 12 O2' A B 103 53.317 59.638 117.730 1.00 44.78 O
ATOM 13 C1' A B 103 51.135 60.597 118.046 1.00 46.30 C
ATOM 14 N9 A B 103 50.126 60.713 119.103 1.00 47.25 N
ATOM 15 C8 A B 103 48.802 60.339 119.077 1.00 46.45 C
ATOM 16 N7 A B 103 48.171 60.553 120.207 1.00 46.42 N
ATOM 17 C5 A B 103 49.142 61.108 121.031 1.00 47.20 C
ATOM 18 C6 A B 103 49.112 61.553 122.364 1.00 48.60 C
ATOM 19 N6 A B 103 48.023 61.506 123.138 1.00 50.19 N
ATOM 20 N1 A B 103 50.252 62.053 122.885 1.00 48.49 N
ATOM 21 C2 A B 103 51.343 62.099 122.112 1.00 48.01 C
ATOM 22 N3 A B 103 51.497 61.713 120.851 1.00 46.83 N
ATOM 23 C4 A B 103 50.346 61.219 120.362 1.00 47.01 C
ATOM 24 P A B 104 52.048 55.924 118.132 1.00 46.77 P
ATOM 25 OP1 A B 104 52.781 54.842 117.423 1.00 45.36 O
ATOM 26 OP2 A B 104 50.649 55.695 118.587 1.00 45.93 O
ATOM 27 O5' A B 104 52.894 56.407 119.395 1.00 45.39 O
TER

Atoms:
OP1: (45.600,62.830,126.380)
OP2: (45.469,64.128,128.603)
C3': (40.532,61.588,125.870)
C1': (41.870,61.790,123.949)
C5': (42.466,62.357,127.264)
O4': (42.336,62.764,124.868)
C8: (44.342,61.387,123.410)
O2': (40.284,59.924,124.081)
C6: (44.359,59.691,120.325)
C5: (44.191,60.366,121.549)
C4: (42.896,60.636,121.943)
P: (44.950,63.061,127.701)
C4': (41.564,62.677,126.105)
C2': (41.199,60.720,124.811)
C2: (42.058,59.679,120.151)
N1: (43.248,59.351,119.640)
N3: (41.773,60.316,121.281)
N6: (45.550,59.374,119.805)
N7: (45.099,60.842,122.486)
N9: (42.997,61.299,123.146)
O5': (43.414,63.396,127.456)
O3': (39.349,62.170,125.364)
OP1: (47.582,56.422,115.021)
OP2: (46.437,57.239,117.170)
C3': (51.272,58.325,117.483)
C1': (51.135,60.597,118.046)
C5': (49.657,58.512,115.531)
O4': (50.473,60.400,116.804)
C8: (48.802,60.339,119.077)
O2': (53.317,59.638,117.730)
C6: (49.112,61.553,122.364)
C5: (49.142,61.108,121.031)
C4: (50.346,61.219,120.362)
P: (47.263,57.517,115.969)
C4': (50.832,59.102,116.260)
C2': (52.035,59.381,118.265)
C2: (51.343,62.099,122.112)
N1: (50.252,62.053,122.885)
N3: (51.497,61.713,120.851)
N6: (48.023,61.506,123.138)
N7: (48.171,60.553,120.207)
N9: (50.126,60.713,119.103)
O5': (48.609,58.205,116.459)
O3': (52.049,57.193,117.151)
Image (generated by PyMOL):
PyMOL image
show in jmol