Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0200:0215
Extra
PDB:
ATOM 1 O3' U A 199 56.715 88.999 36.161 1.00 42.99 O
ATOM 2 P A A 200 57.587 88.568 37.443 1.00 45.50 P
ATOM 3 OP1 A A 200 58.997 88.939 37.164 1.00 45.17 O
ATOM 4 OP2 A A 200 57.261 87.159 37.797 1.00 45.51 O
ATOM 5 O5' A A 200 57.025 89.497 38.607 1.00 46.25 O
ATOM 6 C5' A A 200 57.132 89.106 39.986 1.00 44.08 C
ATOM 7 C4' A A 200 57.178 90.329 40.866 1.00 43.49 C
ATOM 8 O4' A A 200 58.393 91.068 40.575 1.00 43.71 O
ATOM 9 C3' A A 200 56.033 91.327 40.712 1.00 42.17 C
ATOM 10 O3' A A 200 55.909 92.000 41.950 1.00 42.65 O
ATOM 11 C2' A A 200 56.609 92.332 39.722 1.00 43.21 C
ATOM 12 O2' A A 200 56.027 93.613 39.845 1.00 41.68 O
ATOM 13 C1' A A 200 58.063 92.387 40.188 1.00 44.86 C
ATOM 14 N9 A A 200 59.024 92.828 39.180 1.00 46.03 N
ATOM 15 C8 A A 200 59.595 92.086 38.181 1.00 46.56 C
ATOM 16 N7 A A 200 60.435 92.758 37.437 1.00 48.95 N
ATOM 17 C5 A A 200 60.413 94.034 37.980 1.00 49.86 C
ATOM 18 C6 A A 200 61.089 95.223 37.636 1.00 51.15 C
ATOM 19 N6 A A 200 61.951 95.318 36.619 1.00 50.54 N
ATOM 20 N1 A A 200 60.843 96.323 38.383 1.00 51.40 N
ATOM 21 C2 A A 200 59.977 96.222 39.402 1.00 50.28 C
ATOM 22 N3 A A 200 59.281 95.164 39.819 1.00 48.64 N
ATOM 23 C4 A A 200 59.547 94.091 39.056 1.00 48.07 C
ATOM 24 P G A 201 54.587 91.848 42.834 1.00 43.45 P
ATOM 25 OP1 G A 201 54.405 90.411 43.164 1.00 41.76 O
ATOM 26 OP2 G A 201 53.492 92.601 42.179 1.00 42.72 O
ATOM 27 O5' G A 201 54.993 92.627 44.160 1.00 43.92 O
TER
ATOM 1 O3' A B 214 65.146 98.380 36.162 1.00 38.54 O
ATOM 2 P A B 215 64.238 98.305 34.852 1.00 39.46 P
ATOM 3 OP1 A B 215 64.314 99.632 34.203 1.00 40.31 O
ATOM 4 OP2 A B 215 62.918 97.752 35.226 1.00 40.52 O
ATOM 5 O5' A B 215 64.981 97.233 33.948 1.00 38.33 O
ATOM 6 C5' A B 215 66.325 97.438 33.532 1.00 41.88 C
ATOM 7 C4' A B 215 66.861 96.178 32.915 1.00 45.70 C
ATOM 8 O4' A B 215 66.817 95.137 33.924 1.00 47.82 O
ATOM 9 C3' A B 215 66.060 95.603 31.753 1.00 45.22 C
ATOM 10 O3' A B 215 66.374 96.217 30.502 1.00 44.51 O
ATOM 11 C2' A B 215 66.454 94.132 31.806 1.00 47.40 C
ATOM 12 O2' A B 215 67.732 93.864 31.266 1.00 47.33 O
ATOM 13 C1' A B 215 66.502 93.897 33.317 1.00 48.15 C
ATOM 14 N9 A B 215 65.222 93.441 33.858 1.00 49.40 N
ATOM 15 C8 A B 215 64.231 94.193 34.445 1.00 50.01 C
ATOM 16 N7 A B 215 63.200 93.489 34.842 1.00 50.50 N
ATOM 17 C5 A B 215 63.534 92.187 34.494 1.00 49.70 C
ATOM 18 C6 A B 215 62.865 90.972 34.652 1.00 49.07 C
ATOM 19 N6 A B 215 61.670 90.856 35.234 1.00 49.06 N
ATOM 20 N1 A B 215 63.470 89.860 34.188 1.00 49.23 N
ATOM 21 C2 A B 215 64.664 89.975 33.606 1.00 48.11 C
ATOM 22 N3 A B 215 65.395 91.057 33.400 1.00 47.92 N
ATOM 23 C4 A B 215 64.769 92.145 33.877 1.00 49.35 C
ATOM 24 P C B 216 65.267 96.266 29.335 1.00 45.26 P
ATOM 25 OP1 C B 216 65.754 97.142 28.258 1.00 45.90 O
ATOM 26 OP2 C B 216 63.951 96.546 29.956 1.00 46.29 O
ATOM 27 O5' C B 216 65.244 94.784 28.754 1.00 46.85 O
TER
ATOM 2 P A A 200 57.587 88.568 37.443 1.00 45.50 P
ATOM 3 OP1 A A 200 58.997 88.939 37.164 1.00 45.17 O
ATOM 4 OP2 A A 200 57.261 87.159 37.797 1.00 45.51 O
ATOM 5 O5' A A 200 57.025 89.497 38.607 1.00 46.25 O
ATOM 6 C5' A A 200 57.132 89.106 39.986 1.00 44.08 C
ATOM 7 C4' A A 200 57.178 90.329 40.866 1.00 43.49 C
ATOM 8 O4' A A 200 58.393 91.068 40.575 1.00 43.71 O
ATOM 9 C3' A A 200 56.033 91.327 40.712 1.00 42.17 C
ATOM 10 O3' A A 200 55.909 92.000 41.950 1.00 42.65 O
ATOM 11 C2' A A 200 56.609 92.332 39.722 1.00 43.21 C
ATOM 12 O2' A A 200 56.027 93.613 39.845 1.00 41.68 O
ATOM 13 C1' A A 200 58.063 92.387 40.188 1.00 44.86 C
ATOM 14 N9 A A 200 59.024 92.828 39.180 1.00 46.03 N
ATOM 15 C8 A A 200 59.595 92.086 38.181 1.00 46.56 C
ATOM 16 N7 A A 200 60.435 92.758 37.437 1.00 48.95 N
ATOM 17 C5 A A 200 60.413 94.034 37.980 1.00 49.86 C
ATOM 18 C6 A A 200 61.089 95.223 37.636 1.00 51.15 C
ATOM 19 N6 A A 200 61.951 95.318 36.619 1.00 50.54 N
ATOM 20 N1 A A 200 60.843 96.323 38.383 1.00 51.40 N
ATOM 21 C2 A A 200 59.977 96.222 39.402 1.00 50.28 C
ATOM 22 N3 A A 200 59.281 95.164 39.819 1.00 48.64 N
ATOM 23 C4 A A 200 59.547 94.091 39.056 1.00 48.07 C
ATOM 24 P G A 201 54.587 91.848 42.834 1.00 43.45 P
ATOM 25 OP1 G A 201 54.405 90.411 43.164 1.00 41.76 O
ATOM 26 OP2 G A 201 53.492 92.601 42.179 1.00 42.72 O
ATOM 27 O5' G A 201 54.993 92.627 44.160 1.00 43.92 O
TER
ATOM 1 O3' A B 214 65.146 98.380 36.162 1.00 38.54 O
ATOM 2 P A B 215 64.238 98.305 34.852 1.00 39.46 P
ATOM 3 OP1 A B 215 64.314 99.632 34.203 1.00 40.31 O
ATOM 4 OP2 A B 215 62.918 97.752 35.226 1.00 40.52 O
ATOM 5 O5' A B 215 64.981 97.233 33.948 1.00 38.33 O
ATOM 6 C5' A B 215 66.325 97.438 33.532 1.00 41.88 C
ATOM 7 C4' A B 215 66.861 96.178 32.915 1.00 45.70 C
ATOM 8 O4' A B 215 66.817 95.137 33.924 1.00 47.82 O
ATOM 9 C3' A B 215 66.060 95.603 31.753 1.00 45.22 C
ATOM 10 O3' A B 215 66.374 96.217 30.502 1.00 44.51 O
ATOM 11 C2' A B 215 66.454 94.132 31.806 1.00 47.40 C
ATOM 12 O2' A B 215 67.732 93.864 31.266 1.00 47.33 O
ATOM 13 C1' A B 215 66.502 93.897 33.317 1.00 48.15 C
ATOM 14 N9 A B 215 65.222 93.441 33.858 1.00 49.40 N
ATOM 15 C8 A B 215 64.231 94.193 34.445 1.00 50.01 C
ATOM 16 N7 A B 215 63.200 93.489 34.842 1.00 50.50 N
ATOM 17 C5 A B 215 63.534 92.187 34.494 1.00 49.70 C
ATOM 18 C6 A B 215 62.865 90.972 34.652 1.00 49.07 C
ATOM 19 N6 A B 215 61.670 90.856 35.234 1.00 49.06 N
ATOM 20 N1 A B 215 63.470 89.860 34.188 1.00 49.23 N
ATOM 21 C2 A B 215 64.664 89.975 33.606 1.00 48.11 C
ATOM 22 N3 A B 215 65.395 91.057 33.400 1.00 47.92 N
ATOM 23 C4 A B 215 64.769 92.145 33.877 1.00 49.35 C
ATOM 24 P C B 216 65.267 96.266 29.335 1.00 45.26 P
ATOM 25 OP1 C B 216 65.754 97.142 28.258 1.00 45.90 O
ATOM 26 OP2 C B 216 63.951 96.546 29.956 1.00 46.29 O
ATOM 27 O5' C B 216 65.244 94.784 28.754 1.00 46.85 O
TER
Atoms:
OP1: (58.997,88.939,37.164)
OP2: (57.261,87.159,37.797)
C3': (56.033,91.327,40.712)
C1': (58.063,92.387,40.188)
C5': (57.132,89.106,39.986)
O4': (58.393,91.068,40.575)
C8: (59.595,92.086,38.181)
O2': (56.027,93.613,39.845)
C6: (61.089,95.223,37.636)
C5: (60.413,94.034,37.980)
C4: (59.547,94.091,39.056)
P: (57.587,88.568,37.443)
C4': (57.178,90.329,40.866)
C2': (56.609,92.332,39.722)
C2: (59.977,96.222,39.402)
N1: (60.843,96.323,38.383)
N3: (59.281,95.164,39.819)
N6: (61.951,95.318,36.619)
N7: (60.435,92.758,37.437)
N9: (59.024,92.828,39.180)
O5': (57.025,89.497,38.607)
O3': (55.909,92.000,41.950)
OP2: (57.261,87.159,37.797)
C3': (56.033,91.327,40.712)
C1': (58.063,92.387,40.188)
C5': (57.132,89.106,39.986)
O4': (58.393,91.068,40.575)
C8: (59.595,92.086,38.181)
O2': (56.027,93.613,39.845)
C6: (61.089,95.223,37.636)
C5: (60.413,94.034,37.980)
C4: (59.547,94.091,39.056)
P: (57.587,88.568,37.443)
C4': (57.178,90.329,40.866)
C2': (56.609,92.332,39.722)
C2: (59.977,96.222,39.402)
N1: (60.843,96.323,38.383)
N3: (59.281,95.164,39.819)
N6: (61.951,95.318,36.619)
N7: (60.435,92.758,37.437)
N9: (59.024,92.828,39.180)
O5': (57.025,89.497,38.607)
O3': (55.909,92.000,41.950)
OP1: (64.314,99.632,34.203)
OP2: (62.918,97.752,35.226)
C3': (66.060,95.603,31.753)
C1': (66.502,93.897,33.317)
C5': (66.325,97.438,33.532)
O4': (66.817,95.137,33.924)
C8: (64.231,94.193,34.445)
O2': (67.732,93.864,31.266)
C6: (62.865,90.972,34.652)
C5: (63.534,92.187,34.494)
C4: (64.769,92.145,33.877)
P: (64.238,98.305,34.852)
C4': (66.861,96.178,32.915)
C2': (66.454,94.132,31.806)
C2: (64.664,89.975,33.606)
N1: (63.470,89.860,34.188)
N3: (65.395,91.057,33.400)
N6: (61.670,90.856,35.234)
N7: (63.200,93.489,34.842)
N9: (65.222,93.441,33.858)
O5': (64.981,97.233,33.948)
O3': (66.374,96.217,30.502)
OP2: (62.918,97.752,35.226)
C3': (66.060,95.603,31.753)
C1': (66.502,93.897,33.317)
C5': (66.325,97.438,33.532)
O4': (66.817,95.137,33.924)
C8: (64.231,94.193,34.445)
O2': (67.732,93.864,31.266)
C6: (62.865,90.972,34.652)
C5: (63.534,92.187,34.494)
C4: (64.769,92.145,33.877)
P: (64.238,98.305,34.852)
C4': (66.861,96.178,32.915)
C2': (66.454,94.132,31.806)
C2: (64.664,89.975,33.606)
N1: (63.470,89.860,34.188)
N3: (65.395,91.057,33.400)
N6: (61.670,90.856,35.234)
N7: (63.200,93.489,34.842)
N9: (65.222,93.441,33.858)
O5': (64.981,97.233,33.948)
O3': (66.374,96.217,30.502)
Image (generated by PyMOL):