Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11147:11245
Extra
PDB:
ATOM 1 O3' A A1146 29.246 -3.081 21.435 1.00 52.82 O
ATOM 2 P A A1147 28.433 -3.066 20.083 1.00 46.94 P
ATOM 3 OP1 A A1147 29.056 -4.006 19.163 1.00 47.13 O
ATOM 4 OP2 A A1147 28.299 -1.649 19.660 1.00 47.12 O
ATOM 5 O5' A A1147 27.045 -3.635 20.543 1.00 46.93 O
ATOM 6 C5' A A1147 26.899 -5.008 20.787 1.00 46.85 C
ATOM 7 C4' A A1147 25.458 -5.376 20.947 1.00 46.96 C
ATOM 8 O4' A A1147 24.848 -4.587 21.992 1.00 46.74 O
ATOM 9 C3' A A1147 24.566 -5.139 19.752 1.00 47.42 C
ATOM 10 O3' A A1147 24.729 -6.140 18.785 1.00 47.68 O
ATOM 11 C2' A A1147 23.198 -5.134 20.409 1.00 47.39 C
ATOM 12 O2' A A1147 22.846 -6.445 20.817 1.00 47.30 O
ATOM 13 C1' A A1147 23.508 -4.332 21.660 1.00 46.99 C
ATOM 14 N9 A A1147 23.402 -2.900 21.427 1.00 47.11 N
ATOM 15 C8 A A1147 24.427 -2.035 21.122 1.00 47.10 C
ATOM 16 N7 A A1147 24.010 -0.795 21.000 1.00 47.23 N
ATOM 17 C5 A A1147 22.655 -0.881 21.227 1.00 47.33 C
ATOM 18 C6 A A1147 21.664 0.063 21.269 1.00 47.49 C
ATOM 19 N6 A A1147 21.913 1.338 21.038 1.00 47.59 N
ATOM 20 N1 A A1147 20.403 -0.334 21.553 1.00 47.56 N
ATOM 21 C2 A A1147 20.167 -1.624 21.803 1.00 47.46 C
ATOM 22 N3 A A1147 21.026 -2.633 21.818 1.00 47.31 N
ATOM 23 C4 A A1147 22.256 -2.166 21.511 1.00 47.25 C
ATOM 24 P A A1148 24.314 -5.900 17.277 1.00 50.99 P
ATOM 25 OP1 A A1148 24.814 -7.061 16.531 1.00 51.17 O
ATOM 26 OP2 A A1148 24.760 -4.531 16.879 1.00 51.08 O
ATOM 27 O5' A A1148 22.739 -5.954 17.347 1.00 51.16 O
TER
ATOM 1 O3' G B1244 19.468 5.589 20.367 1.00 44.17 O
ATOM 2 P A B1245 19.934 5.346 21.871 1.00 44.54 P
ATOM 3 OP1 A B1245 20.679 4.060 21.894 1.00 44.33 O
ATOM 4 OP2 A B1245 18.764 5.490 22.740 1.00 44.47 O
ATOM 5 O5' A B1245 20.945 6.545 22.115 1.00 44.43 O
ATOM 6 C5' A B1245 21.394 6.857 23.436 1.00 44.03 C
ATOM 7 C4' A B1245 22.823 7.330 23.471 1.00 43.88 C
ATOM 8 O4' A B1245 23.721 6.200 23.367 1.00 43.69 O
ATOM 9 C3' A B1245 23.223 8.276 22.368 1.00 44.22 C
ATOM 10 O3' A B1245 24.228 9.155 22.876 1.00 44.04 O
ATOM 11 C2' A B1245 23.834 7.325 21.329 1.00 44.35 C
ATOM 12 O2' A B1245 24.712 7.937 20.426 1.00 44.56 O
ATOM 13 C1' A B1245 24.557 6.344 22.227 1.00 43.92 C
ATOM 14 N9 A B1245 24.746 5.009 21.668 1.00 43.94 N
ATOM 15 C8 A B1245 23.755 4.150 21.302 1.00 44.11 C
ATOM 16 N7 A B1245 24.158 2.960 20.931 1.00 44.08 N
ATOM 17 C5 A B1245 25.493 3.027 21.090 1.00 43.88 C
ATOM 18 C6 A B1245 26.458 2.068 20.855 1.00 43.78 C
ATOM 19 N6 A B1245 26.113 0.874 20.431 1.00 43.88 N
ATOM 20 N1 A B1245 27.768 2.390 21.067 1.00 43.60 N
ATOM 21 C2 A B1245 28.019 3.632 21.505 1.00 43.53 C
ATOM 22 N3 A B1245 27.163 4.637 21.771 1.00 43.61 N
ATOM 23 C4 A B1245 25.888 4.270 21.546 1.00 43.79 C
ATOM 24 P A B1246 23.804 10.497 23.669 1.00 44.44 P
ATOM 25 OP1 A B1246 22.856 11.233 22.807 1.00 44.88 O
ATOM 26 OP2 A B1246 25.071 11.179 24.084 1.00 44.26 O
ATOM 27 O5' A B1246 23.033 9.946 24.946 1.00 44.14 O
TER
ATOM 2 P A A1147 28.433 -3.066 20.083 1.00 46.94 P
ATOM 3 OP1 A A1147 29.056 -4.006 19.163 1.00 47.13 O
ATOM 4 OP2 A A1147 28.299 -1.649 19.660 1.00 47.12 O
ATOM 5 O5' A A1147 27.045 -3.635 20.543 1.00 46.93 O
ATOM 6 C5' A A1147 26.899 -5.008 20.787 1.00 46.85 C
ATOM 7 C4' A A1147 25.458 -5.376 20.947 1.00 46.96 C
ATOM 8 O4' A A1147 24.848 -4.587 21.992 1.00 46.74 O
ATOM 9 C3' A A1147 24.566 -5.139 19.752 1.00 47.42 C
ATOM 10 O3' A A1147 24.729 -6.140 18.785 1.00 47.68 O
ATOM 11 C2' A A1147 23.198 -5.134 20.409 1.00 47.39 C
ATOM 12 O2' A A1147 22.846 -6.445 20.817 1.00 47.30 O
ATOM 13 C1' A A1147 23.508 -4.332 21.660 1.00 46.99 C
ATOM 14 N9 A A1147 23.402 -2.900 21.427 1.00 47.11 N
ATOM 15 C8 A A1147 24.427 -2.035 21.122 1.00 47.10 C
ATOM 16 N7 A A1147 24.010 -0.795 21.000 1.00 47.23 N
ATOM 17 C5 A A1147 22.655 -0.881 21.227 1.00 47.33 C
ATOM 18 C6 A A1147 21.664 0.063 21.269 1.00 47.49 C
ATOM 19 N6 A A1147 21.913 1.338 21.038 1.00 47.59 N
ATOM 20 N1 A A1147 20.403 -0.334 21.553 1.00 47.56 N
ATOM 21 C2 A A1147 20.167 -1.624 21.803 1.00 47.46 C
ATOM 22 N3 A A1147 21.026 -2.633 21.818 1.00 47.31 N
ATOM 23 C4 A A1147 22.256 -2.166 21.511 1.00 47.25 C
ATOM 24 P A A1148 24.314 -5.900 17.277 1.00 50.99 P
ATOM 25 OP1 A A1148 24.814 -7.061 16.531 1.00 51.17 O
ATOM 26 OP2 A A1148 24.760 -4.531 16.879 1.00 51.08 O
ATOM 27 O5' A A1148 22.739 -5.954 17.347 1.00 51.16 O
TER
ATOM 1 O3' G B1244 19.468 5.589 20.367 1.00 44.17 O
ATOM 2 P A B1245 19.934 5.346 21.871 1.00 44.54 P
ATOM 3 OP1 A B1245 20.679 4.060 21.894 1.00 44.33 O
ATOM 4 OP2 A B1245 18.764 5.490 22.740 1.00 44.47 O
ATOM 5 O5' A B1245 20.945 6.545 22.115 1.00 44.43 O
ATOM 6 C5' A B1245 21.394 6.857 23.436 1.00 44.03 C
ATOM 7 C4' A B1245 22.823 7.330 23.471 1.00 43.88 C
ATOM 8 O4' A B1245 23.721 6.200 23.367 1.00 43.69 O
ATOM 9 C3' A B1245 23.223 8.276 22.368 1.00 44.22 C
ATOM 10 O3' A B1245 24.228 9.155 22.876 1.00 44.04 O
ATOM 11 C2' A B1245 23.834 7.325 21.329 1.00 44.35 C
ATOM 12 O2' A B1245 24.712 7.937 20.426 1.00 44.56 O
ATOM 13 C1' A B1245 24.557 6.344 22.227 1.00 43.92 C
ATOM 14 N9 A B1245 24.746 5.009 21.668 1.00 43.94 N
ATOM 15 C8 A B1245 23.755 4.150 21.302 1.00 44.11 C
ATOM 16 N7 A B1245 24.158 2.960 20.931 1.00 44.08 N
ATOM 17 C5 A B1245 25.493 3.027 21.090 1.00 43.88 C
ATOM 18 C6 A B1245 26.458 2.068 20.855 1.00 43.78 C
ATOM 19 N6 A B1245 26.113 0.874 20.431 1.00 43.88 N
ATOM 20 N1 A B1245 27.768 2.390 21.067 1.00 43.60 N
ATOM 21 C2 A B1245 28.019 3.632 21.505 1.00 43.53 C
ATOM 22 N3 A B1245 27.163 4.637 21.771 1.00 43.61 N
ATOM 23 C4 A B1245 25.888 4.270 21.546 1.00 43.79 C
ATOM 24 P A B1246 23.804 10.497 23.669 1.00 44.44 P
ATOM 25 OP1 A B1246 22.856 11.233 22.807 1.00 44.88 O
ATOM 26 OP2 A B1246 25.071 11.179 24.084 1.00 44.26 O
ATOM 27 O5' A B1246 23.033 9.946 24.946 1.00 44.14 O
TER
Atoms:
OP1: (29.056,-4.006,19.163)
OP2: (28.299,-1.649,19.660)
C3': (24.566,-5.139,19.752)
C1': (23.508,-4.332,21.660)
C5': (26.899,-5.008,20.787)
O4': (24.848,-4.587,21.992)
C8: (24.427,-2.035,21.122)
O2': (22.846,-6.445,20.817)
C6: (21.664,0.063,21.269)
C5: (22.655,-0.881,21.227)
C4: (22.256,-2.166,21.511)
P: (28.433,-3.066,20.083)
C4': (25.458,-5.376,20.947)
C2': (23.198,-5.134,20.409)
C2: (20.167,-1.624,21.803)
N1: (20.403,-0.334,21.553)
N3: (21.026,-2.633,21.818)
N6: (21.913,1.338,21.038)
N7: (24.010,-0.795,21.000)
N9: (23.402,-2.900,21.427)
O5': (27.045,-3.635,20.543)
O3': (24.729,-6.140,18.785)
OP2: (28.299,-1.649,19.660)
C3': (24.566,-5.139,19.752)
C1': (23.508,-4.332,21.660)
C5': (26.899,-5.008,20.787)
O4': (24.848,-4.587,21.992)
C8: (24.427,-2.035,21.122)
O2': (22.846,-6.445,20.817)
C6: (21.664,0.063,21.269)
C5: (22.655,-0.881,21.227)
C4: (22.256,-2.166,21.511)
P: (28.433,-3.066,20.083)
C4': (25.458,-5.376,20.947)
C2': (23.198,-5.134,20.409)
C2: (20.167,-1.624,21.803)
N1: (20.403,-0.334,21.553)
N3: (21.026,-2.633,21.818)
N6: (21.913,1.338,21.038)
N7: (24.010,-0.795,21.000)
N9: (23.402,-2.900,21.427)
O5': (27.045,-3.635,20.543)
O3': (24.729,-6.140,18.785)
OP1: (20.679,4.060,21.894)
OP2: (18.764,5.490,22.740)
C3': (23.223,8.276,22.368)
C1': (24.557,6.344,22.227)
C5': (21.394,6.857,23.436)
O4': (23.721,6.200,23.367)
C8: (23.755,4.150,21.302)
O2': (24.712,7.937,20.426)
C6: (26.458,2.068,20.855)
C5: (25.493,3.027,21.090)
C4: (25.888,4.270,21.546)
P: (19.934,5.346,21.871)
C4': (22.823,7.330,23.471)
C2': (23.834,7.325,21.329)
C2: (28.019,3.632,21.505)
N1: (27.768,2.390,21.067)
N3: (27.163,4.637,21.771)
N6: (26.113,0.874,20.431)
N7: (24.158,2.960,20.931)
N9: (24.746,5.009,21.668)
O5': (20.945,6.545,22.115)
O3': (24.228,9.155,22.876)
OP2: (18.764,5.490,22.740)
C3': (23.223,8.276,22.368)
C1': (24.557,6.344,22.227)
C5': (21.394,6.857,23.436)
O4': (23.721,6.200,23.367)
C8: (23.755,4.150,21.302)
O2': (24.712,7.937,20.426)
C6: (26.458,2.068,20.855)
C5: (25.493,3.027,21.090)
C4: (25.888,4.270,21.546)
P: (19.934,5.346,21.871)
C4': (22.823,7.330,23.471)
C2': (23.834,7.325,21.329)
C2: (28.019,3.632,21.505)
N1: (27.768,2.390,21.067)
N3: (27.163,4.637,21.771)
N6: (26.113,0.874,20.431)
N7: (24.158,2.960,20.931)
N9: (24.746,5.009,21.668)
O5': (20.945,6.545,22.115)
O3': (24.228,9.155,22.876)
Image (generated by PyMOL):