ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1K8A:A368:A396

Extra

PDB:
ATOM 1 O3' G A 367 91.195 105.346 16.568 1.00 59.13 O
ATOM 2 P A A 368 92.733 105.040 16.986 1.00 60.06 P
ATOM 3 OP1 A A 368 93.389 106.254 17.560 1.00 58.64 O
ATOM 4 OP2 A A 368 93.342 104.363 15.814 1.00 61.46 O
ATOM 5 O5' A A 368 92.653 103.977 18.168 1.00 58.98 O
ATOM 6 C5' A A 368 92.031 104.321 19.405 1.00 59.34 C
ATOM 7 C4' A A 368 93.037 104.286 20.539 1.00 59.37 C
ATOM 8 O4' A A 368 93.463 102.919 20.743 1.00 59.86 O
ATOM 9 C3' A A 368 94.307 105.121 20.396 1.00 59.37 C
ATOM 10 O3' A A 368 94.692 105.642 21.680 1.00 58.79 O
ATOM 11 C2' A A 368 95.313 104.092 19.888 1.00 59.77 C
ATOM 12 O2' A A 368 96.652 104.426 20.201 1.00 61.00 O
ATOM 13 C1' A A 368 94.862 102.830 20.627 1.00 59.94 C
ATOM 14 N9 A A 368 95.142 101.580 19.926 1.00 61.19 N
ATOM 15 C8 A A 368 94.387 100.967 18.948 1.00 61.35 C
ATOM 16 N7 A A 368 94.912 99.853 18.499 1.00 62.09 N
ATOM 17 C5 A A 368 96.091 99.725 19.223 1.00 61.90 C
ATOM 18 C6 A A 368 97.112 98.769 19.196 1.00 62.23 C
ATOM 19 N6 A A 368 97.137 97.727 18.360 1.00 63.41 N
ATOM 20 N1 A A 368 98.134 98.924 20.056 1.00 62.72 N
ATOM 21 C2 A A 368 98.132 99.978 20.875 1.00 62.73 C
ATOM 22 N3 A A 368 97.239 100.957 20.985 1.00 62.38 N
ATOM 23 C4 A A 368 96.234 100.771 20.117 1.00 61.50 C
ATOM 24 P G A 369 93.975 106.972 22.243 1.00 58.97 P
ATOM 25 OP1 G A 369 92.524 106.628 22.431 1.00 60.08 O
ATOM 26 OP2 G A 369 94.349 108.143 21.418 1.00 59.64 O
ATOM 27 O5' G A 369 94.575 107.190 23.696 1.00 59.62 O
TER

ATOM 1 O3' A B 395 99.593 93.469 19.436 1.00 72.00 O
ATOM 2 P A B 396 99.562 94.038 17.931 1.00 73.43 P
ATOM 3 OP1 A B 396 100.832 93.592 17.284 1.00 73.84 O
ATOM 4 OP2 A B 396 99.234 95.493 17.976 1.00 72.07 O
ATOM 5 O5' A B 396 98.336 93.263 17.260 1.00 72.48 O
ATOM 6 C5' A B 396 98.312 91.816 17.155 1.00 72.51 C
ATOM 7 C4' A B 396 96.931 91.348 16.739 1.00 73.34 C
ATOM 8 O4' A B 396 95.959 91.868 17.684 1.00 73.24 O
ATOM 9 C3' A B 396 96.453 91.880 15.399 1.00 74.90 C
ATOM 10 O3' A B 396 96.944 91.099 14.321 1.00 76.84 O
ATOM 11 C2' A B 396 94.934 91.854 15.542 1.00 74.06 C
ATOM 12 O2' A B 396 94.345 90.574 15.369 1.00 73.51 O
ATOM 13 C1' A B 396 94.776 92.271 17.006 1.00 72.95 C
ATOM 14 N9 A B 396 94.588 93.716 17.214 1.00 71.84 N
ATOM 15 C8 A B 396 95.545 94.666 17.484 1.00 71.29 C
ATOM 16 N7 A B 396 95.067 95.882 17.606 1.00 70.41 N
ATOM 17 C5 A B 396 93.705 95.729 17.404 1.00 70.24 C
ATOM 18 C6 A B 396 92.636 96.650 17.402 1.00 70.39 C
ATOM 19 N6 A B 396 92.780 97.969 17.578 1.00 69.16 N
ATOM 20 N1 A B 396 91.389 96.160 17.201 1.00 70.96 N
ATOM 21 C2 A B 396 91.237 94.843 16.998 1.00 69.94 C
ATOM 22 N3 A B 396 92.162 93.885 16.959 1.00 70.90 N
ATOM 23 C4 A B 396 93.391 94.398 17.172 1.00 70.97 C
ATOM 24 P U B 397 97.563 91.830 13.032 1.00 78.39 P
ATOM 25 OP1 U B 397 98.341 90.758 12.359 1.00 79.12 O
ATOM 26 OP2 U B 397 98.232 93.117 13.400 1.00 78.38 O
ATOM 27 O5' U B 397 96.301 92.201 12.138 1.00 78.31 O
TER

Atoms:
OP1: (93.389,106.254,17.560)
OP2: (93.342,104.363,15.814)
C3': (94.307,105.121,20.396)
C1': (94.862,102.830,20.627)
C5': (92.031,104.321,19.405)
O4': (93.463,102.919,20.743)
C8: (94.387,100.967,18.948)
O2': (96.652,104.426,20.201)
C6: (97.112,98.769,19.196)
C5: (96.091,99.725,19.223)
C4: (96.234,100.771,20.117)
P: (92.733,105.040,16.986)
C4': (93.037,104.286,20.539)
C2': (95.313,104.092,19.888)
C2: (98.132,99.978,20.875)
N1: (98.134,98.924,20.056)
N3: (97.239,100.957,20.985)
N6: (97.137,97.727,18.360)
N7: (94.912,99.853,18.499)
N9: (95.142,101.580,19.926)
O5': (92.653,103.977,18.168)
O3': (94.692,105.642,21.680)
OP1: (100.832,93.592,17.284)
OP2: (99.234,95.493,17.976)
C3': (96.453,91.880,15.399)
C1': (94.776,92.271,17.006)
C5': (98.312,91.816,17.155)
O4': (95.959,91.868,17.684)
C8: (95.545,94.666,17.484)
O2': (94.345,90.574,15.369)
C6: (92.636,96.650,17.402)
C5: (93.705,95.729,17.404)
C4: (93.391,94.398,17.172)
P: (99.562,94.038,17.931)
C4': (96.931,91.348,16.739)
C2': (94.934,91.854,15.542)
C2: (91.237,94.843,16.998)
N1: (91.389,96.160,17.201)
N3: (92.162,93.885,16.959)
N6: (92.780,97.969,17.578)
N7: (95.067,95.882,17.606)
N9: (94.588,93.716,17.214)
O5': (98.336,93.263,17.260)
O3': (96.944,91.099,14.321)
Image (generated by PyMOL):
PyMOL image
show in jmol