Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1462:A1515
Extra
PDB:
ATOM 1 O3' U A1461 4.499 -34.301 11.991 1.00 0.96 O
ATOM 2 P A A1462 4.079 -32.766 12.081 1.00 0.01 P
ATOM 3 OP1 A A1462 3.370 -32.439 10.830 1.00 0.01 O
ATOM 4 OP2 A A1462 5.285 -31.987 12.447 1.00 0.01 O
ATOM 5 O5' A A1462 3.062 -32.763 13.288 1.00 0.01 O
ATOM 6 C5' A A1462 1.789 -33.345 13.148 1.00 0.01 C
ATOM 7 C4' A A1462 1.311 -33.904 14.454 1.00 0.01 C
ATOM 8 O4' A A1462 1.992 -35.141 14.725 1.00 0.01 O
ATOM 9 C3' A A1462 1.575 -33.043 15.673 1.00 0.01 C
ATOM 10 O3' A A1462 0.556 -32.080 15.867 1.00 0.01 O
ATOM 11 C2' A A1462 1.641 -34.068 16.781 1.00 0.01 C
ATOM 12 O2' A A1462 0.336 -34.466 17.147 1.00 0.01 O
ATOM 13 C1' A A1462 2.302 -35.235 16.081 1.00 0.01 C
ATOM 14 N9 A A1462 3.769 -35.241 16.221 1.00 0.01 N
ATOM 15 C8 A A1462 4.698 -35.133 15.216 1.00 0.01 C
ATOM 16 N7 A A1462 5.941 -35.219 15.599 1.00 0.01 N
ATOM 17 C5 A A1462 5.797 -35.426 16.940 1.00 0.01 C
ATOM 18 C6 A A1462 6.740 -35.619 17.917 1.00 0.01 C
ATOM 19 N6 A A1462 8.039 -35.593 17.654 1.00 0.01 N
ATOM 20 N1 A A1462 6.308 -35.826 19.174 1.00 0.01 N
ATOM 21 C2 A A1462 4.997 -35.819 19.406 1.00 0.01 C
ATOM 22 N3 A A1462 4.005 -35.649 18.553 1.00 0.01 N
ATOM 23 C4 A A1462 4.490 -35.462 17.335 1.00 0.01 C
ATOM 24 P A A1463 0.880 -30.627 16.474 1.00 1.05 P
ATOM 25 OP1 A A1463 -0.269 -29.757 16.126 1.00 1.05 O
ATOM 26 OP2 A A1463 2.236 -30.245 15.992 1.00 1.05 O
ATOM 27 O5' A A1463 0.910 -30.892 18.065 1.00 1.05 O
TER
ATOM 1 O3' G B1514 13.020 -34.140 19.797 1.00 0.01 O
ATOM 2 P A B1515 13.355 -35.592 19.220 1.00 6.44 P
ATOM 3 OP1 A B1515 12.065 -36.251 18.948 1.00 6.44 O
ATOM 4 OP2 A B1515 14.281 -36.231 20.156 1.00 6.44 O
ATOM 5 O5' A B1515 14.105 -35.282 17.867 1.00 6.44 O
ATOM 6 C5' A B1515 14.928 -36.271 17.281 1.00 6.44 C
ATOM 7 C4' A B1515 15.078 -36.052 15.808 1.00 6.44 C
ATOM 8 O4' A B1515 13.783 -36.218 15.168 1.00 6.44 O
ATOM 9 C3' A B1515 15.552 -34.658 15.431 1.00 6.44 C
ATOM 10 O3' A B1515 16.272 -34.723 14.201 1.00 6.44 O
ATOM 11 C2' A B1515 14.245 -33.940 15.190 1.00 6.44 C
ATOM 12 O2' A B1515 14.363 -32.795 14.385 1.00 6.44 O
ATOM 13 C1' A B1515 13.454 -35.030 14.487 1.00 6.44 C
ATOM 14 N9 A B1515 12.011 -34.843 14.537 1.00 6.44 N
ATOM 15 C8 A B1515 11.244 -35.122 15.617 1.00 6.44 C
ATOM 16 N7 A B1515 9.976 -34.862 15.427 1.00 6.44 N
ATOM 17 C5 A B1515 9.896 -34.382 14.137 1.00 6.44 C
ATOM 18 C6 A B1515 8.785 -33.940 13.391 1.00 6.44 C
ATOM 19 N6 A B1515 7.559 -33.958 13.919 1.00 6.44 N
ATOM 20 N1 A B1515 8.999 -33.494 12.121 1.00 6.44 N
ATOM 21 C2 A B1515 10.274 -33.534 11.689 1.00 6.44 C
ATOM 22 N3 A B1515 11.396 -33.937 12.326 1.00 6.44 N
ATOM 23 C4 A B1515 11.149 -34.358 13.571 1.00 6.44 C
ATOM 24 P U B1516 17.815 -34.287 14.114 1.00 11.28 P
ATOM 25 OP1 U B1516 18.277 -34.019 15.514 1.00 11.28 O
ATOM 26 OP2 U B1516 17.895 -33.201 13.108 1.00 11.28 O
ATOM 27 O5' U B1516 18.507 -35.611 13.541 1.00 11.28 O
TER
ATOM 2 P A A1462 4.079 -32.766 12.081 1.00 0.01 P
ATOM 3 OP1 A A1462 3.370 -32.439 10.830 1.00 0.01 O
ATOM 4 OP2 A A1462 5.285 -31.987 12.447 1.00 0.01 O
ATOM 5 O5' A A1462 3.062 -32.763 13.288 1.00 0.01 O
ATOM 6 C5' A A1462 1.789 -33.345 13.148 1.00 0.01 C
ATOM 7 C4' A A1462 1.311 -33.904 14.454 1.00 0.01 C
ATOM 8 O4' A A1462 1.992 -35.141 14.725 1.00 0.01 O
ATOM 9 C3' A A1462 1.575 -33.043 15.673 1.00 0.01 C
ATOM 10 O3' A A1462 0.556 -32.080 15.867 1.00 0.01 O
ATOM 11 C2' A A1462 1.641 -34.068 16.781 1.00 0.01 C
ATOM 12 O2' A A1462 0.336 -34.466 17.147 1.00 0.01 O
ATOM 13 C1' A A1462 2.302 -35.235 16.081 1.00 0.01 C
ATOM 14 N9 A A1462 3.769 -35.241 16.221 1.00 0.01 N
ATOM 15 C8 A A1462 4.698 -35.133 15.216 1.00 0.01 C
ATOM 16 N7 A A1462 5.941 -35.219 15.599 1.00 0.01 N
ATOM 17 C5 A A1462 5.797 -35.426 16.940 1.00 0.01 C
ATOM 18 C6 A A1462 6.740 -35.619 17.917 1.00 0.01 C
ATOM 19 N6 A A1462 8.039 -35.593 17.654 1.00 0.01 N
ATOM 20 N1 A A1462 6.308 -35.826 19.174 1.00 0.01 N
ATOM 21 C2 A A1462 4.997 -35.819 19.406 1.00 0.01 C
ATOM 22 N3 A A1462 4.005 -35.649 18.553 1.00 0.01 N
ATOM 23 C4 A A1462 4.490 -35.462 17.335 1.00 0.01 C
ATOM 24 P A A1463 0.880 -30.627 16.474 1.00 1.05 P
ATOM 25 OP1 A A1463 -0.269 -29.757 16.126 1.00 1.05 O
ATOM 26 OP2 A A1463 2.236 -30.245 15.992 1.00 1.05 O
ATOM 27 O5' A A1463 0.910 -30.892 18.065 1.00 1.05 O
TER
ATOM 1 O3' G B1514 13.020 -34.140 19.797 1.00 0.01 O
ATOM 2 P A B1515 13.355 -35.592 19.220 1.00 6.44 P
ATOM 3 OP1 A B1515 12.065 -36.251 18.948 1.00 6.44 O
ATOM 4 OP2 A B1515 14.281 -36.231 20.156 1.00 6.44 O
ATOM 5 O5' A B1515 14.105 -35.282 17.867 1.00 6.44 O
ATOM 6 C5' A B1515 14.928 -36.271 17.281 1.00 6.44 C
ATOM 7 C4' A B1515 15.078 -36.052 15.808 1.00 6.44 C
ATOM 8 O4' A B1515 13.783 -36.218 15.168 1.00 6.44 O
ATOM 9 C3' A B1515 15.552 -34.658 15.431 1.00 6.44 C
ATOM 10 O3' A B1515 16.272 -34.723 14.201 1.00 6.44 O
ATOM 11 C2' A B1515 14.245 -33.940 15.190 1.00 6.44 C
ATOM 12 O2' A B1515 14.363 -32.795 14.385 1.00 6.44 O
ATOM 13 C1' A B1515 13.454 -35.030 14.487 1.00 6.44 C
ATOM 14 N9 A B1515 12.011 -34.843 14.537 1.00 6.44 N
ATOM 15 C8 A B1515 11.244 -35.122 15.617 1.00 6.44 C
ATOM 16 N7 A B1515 9.976 -34.862 15.427 1.00 6.44 N
ATOM 17 C5 A B1515 9.896 -34.382 14.137 1.00 6.44 C
ATOM 18 C6 A B1515 8.785 -33.940 13.391 1.00 6.44 C
ATOM 19 N6 A B1515 7.559 -33.958 13.919 1.00 6.44 N
ATOM 20 N1 A B1515 8.999 -33.494 12.121 1.00 6.44 N
ATOM 21 C2 A B1515 10.274 -33.534 11.689 1.00 6.44 C
ATOM 22 N3 A B1515 11.396 -33.937 12.326 1.00 6.44 N
ATOM 23 C4 A B1515 11.149 -34.358 13.571 1.00 6.44 C
ATOM 24 P U B1516 17.815 -34.287 14.114 1.00 11.28 P
ATOM 25 OP1 U B1516 18.277 -34.019 15.514 1.00 11.28 O
ATOM 26 OP2 U B1516 17.895 -33.201 13.108 1.00 11.28 O
ATOM 27 O5' U B1516 18.507 -35.611 13.541 1.00 11.28 O
TER
Atoms:
OP1: (3.370,-32.439,10.830)
OP2: (5.285,-31.987,12.447)
C3': (1.575,-33.043,15.673)
C1': (2.302,-35.235,16.081)
C5': (1.789,-33.345,13.148)
O4': (1.992,-35.141,14.725)
C8: (4.698,-35.133,15.216)
O2': (0.336,-34.466,17.147)
C6: (6.740,-35.619,17.917)
C5: (5.797,-35.426,16.940)
C4: (4.490,-35.462,17.335)
P: (4.079,-32.766,12.081)
C4': (1.311,-33.904,14.454)
C2': (1.641,-34.068,16.781)
C2: (4.997,-35.819,19.406)
N1: (6.308,-35.826,19.174)
N3: (4.005,-35.649,18.553)
N6: (8.039,-35.593,17.654)
N7: (5.941,-35.219,15.599)
N9: (3.769,-35.241,16.221)
O5': (3.062,-32.763,13.288)
O3': (0.556,-32.080,15.867)
OP2: (5.285,-31.987,12.447)
C3': (1.575,-33.043,15.673)
C1': (2.302,-35.235,16.081)
C5': (1.789,-33.345,13.148)
O4': (1.992,-35.141,14.725)
C8: (4.698,-35.133,15.216)
O2': (0.336,-34.466,17.147)
C6: (6.740,-35.619,17.917)
C5: (5.797,-35.426,16.940)
C4: (4.490,-35.462,17.335)
P: (4.079,-32.766,12.081)
C4': (1.311,-33.904,14.454)
C2': (1.641,-34.068,16.781)
C2: (4.997,-35.819,19.406)
N1: (6.308,-35.826,19.174)
N3: (4.005,-35.649,18.553)
N6: (8.039,-35.593,17.654)
N7: (5.941,-35.219,15.599)
N9: (3.769,-35.241,16.221)
O5': (3.062,-32.763,13.288)
O3': (0.556,-32.080,15.867)
OP1: (12.065,-36.251,18.948)
OP2: (14.281,-36.231,20.156)
C3': (15.552,-34.658,15.431)
C1': (13.454,-35.030,14.487)
C5': (14.928,-36.271,17.281)
O4': (13.783,-36.218,15.168)
C8: (11.244,-35.122,15.617)
O2': (14.363,-32.795,14.385)
C6: (8.785,-33.940,13.391)
C5: (9.896,-34.382,14.137)
C4: (11.149,-34.358,13.571)
P: (13.355,-35.592,19.220)
C4': (15.078,-36.052,15.808)
C2': (14.245,-33.940,15.190)
C2: (10.274,-33.534,11.689)
N1: (8.999,-33.494,12.121)
N3: (11.396,-33.937,12.326)
N6: (7.559,-33.958,13.919)
N7: (9.976,-34.862,15.427)
N9: (12.011,-34.843,14.537)
O5': (14.105,-35.282,17.867)
O3': (16.272,-34.723,14.201)
OP2: (14.281,-36.231,20.156)
C3': (15.552,-34.658,15.431)
C1': (13.454,-35.030,14.487)
C5': (14.928,-36.271,17.281)
O4': (13.783,-36.218,15.168)
C8: (11.244,-35.122,15.617)
O2': (14.363,-32.795,14.385)
C6: (8.785,-33.940,13.391)
C5: (9.896,-34.382,14.137)
C4: (11.149,-34.358,13.571)
P: (13.355,-35.592,19.220)
C4': (15.078,-36.052,15.808)
C2': (14.245,-33.940,15.190)
C2: (10.274,-33.534,11.689)
N1: (8.999,-33.494,12.121)
N3: (11.396,-33.937,12.326)
N6: (7.559,-33.958,13.919)
N7: (9.976,-34.862,15.427)
N9: (12.011,-34.843,14.537)
O5': (14.105,-35.282,17.867)
O3': (16.272,-34.723,14.201)
Image (generated by PyMOL):