Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1265:1293
Extra
PDB:
ATOM 1 O3' G A 264 42.553 -46.446 134.241 1.00 57.16 O
ATOM 2 P A A 265 40.950 -46.503 134.430 1.00 55.81 P
ATOM 3 OP1 A A 265 40.521 -45.138 134.769 1.00 55.64 O
ATOM 4 OP2 A A 265 40.650 -47.605 135.367 1.00 56.43 O
ATOM 5 O5' A A 265 40.414 -46.874 132.997 1.00 55.26 O
ATOM 6 C5' A A 265 40.249 -45.867 132.017 1.00 54.64 C
ATOM 7 C4' A A 265 38.791 -45.575 131.733 1.00 54.39 C
ATOM 8 O4' A A 265 38.162 -46.748 131.162 1.00 54.38 O
ATOM 9 C3' A A 265 37.944 -45.175 132.930 1.00 54.76 C
ATOM 10 O3' A A 265 36.901 -44.313 132.482 1.00 54.36 O
ATOM 11 C2' A A 265 37.330 -46.490 133.328 1.00 55.17 C
ATOM 12 O2' A A 265 36.136 -46.343 134.050 1.00 55.39 O
ATOM 13 C1' A A 265 37.089 -47.133 131.964 1.00 54.74 C
ATOM 14 N9 A A 265 37.062 -48.580 131.980 1.00 55.07 N
ATOM 15 C8 A A 265 38.106 -49.444 131.897 1.00 55.27 C
ATOM 16 N7 A A 265 37.735 -50.704 131.902 1.00 55.56 N
ATOM 17 C5 A A 265 36.345 -50.665 131.969 1.00 55.52 C
ATOM 18 C6 A A 265 35.338 -51.655 132.017 1.00 55.75 C
ATOM 19 N6 A A 265 35.526 -52.960 131.987 1.00 56.06 N
ATOM 20 N1 A A 265 34.070 -51.246 132.076 1.00 55.63 N
ATOM 21 C2 A A 265 33.833 -49.930 132.100 1.00 55.33 C
ATOM 22 N3 A A 265 34.666 -48.882 132.042 1.00 55.08 N
ATOM 23 C4 A A 265 35.929 -49.341 131.985 1.00 55.20 C
ATOM 24 P G A 266 36.394 -43.077 133.377 1.00 58.04 P
ATOM 25 OP1 G A 266 37.584 -42.377 133.849 1.00 58.15 O
ATOM 26 OP2 G A 266 35.437 -43.616 134.383 1.00 58.53 O
ATOM 27 O5' G A 266 35.641 -42.158 132.320 1.00 57.41 O
TER
ATOM 1 O3' A B 292 32.325 -55.391 130.598 1.00 59.33 O
ATOM 2 P A B 293 33.093 -56.344 131.668 1.00 58.08 P
ATOM 3 OP1 A B 293 32.101 -57.294 132.193 1.00 58.53 O
ATOM 4 OP2 A B 293 33.812 -55.468 132.623 1.00 58.24 O
ATOM 5 O5' A B 293 34.127 -57.112 130.777 1.00 57.97 O
ATOM 6 C5' A B 293 34.223 -58.512 130.815 1.00 58.38 C
ATOM 7 C4' A B 293 35.514 -58.949 130.203 1.00 58.31 C
ATOM 8 O4' A B 293 36.104 -57.833 129.475 1.00 57.73 O
ATOM 9 C3' A B 293 36.568 -59.385 131.181 1.00 58.86 C
ATOM 10 O3' A B 293 36.455 -60.762 131.467 1.00 59.38 O
ATOM 11 C2' A B 293 37.885 -59.009 130.490 1.00 58.53 C
ATOM 12 O2' A B 293 38.315 -60.052 129.642 1.00 58.53 O
ATOM 13 C1' A B 293 37.487 -57.825 129.612 1.00 57.83 C
ATOM 14 N9 A B 293 37.875 -56.513 130.168 1.00 57.70 N
ATOM 15 C8 A B 293 37.109 -55.746 130.994 1.00 57.78 C
ATOM 16 N7 A B 293 37.659 -54.592 131.290 1.00 57.61 N
ATOM 17 C5 A B 293 38.847 -54.560 130.581 1.00 57.37 C
ATOM 18 C6 A B 293 39.860 -53.596 130.476 1.00 57.13 C
ATOM 19 N6 A B 293 39.855 -52.419 131.110 1.00 57.08 N
ATOM 20 N1 A B 293 40.907 -53.886 129.691 1.00 56.96 N
ATOM 21 C2 A B 293 40.927 -55.056 129.056 1.00 57.02 C
ATOM 22 N3 A B 293 40.043 -56.031 129.064 1.00 57.24 N
ATOM 23 C4 A B 293 39.000 -55.733 129.872 1.00 57.42 C
ATOM 24 P G B 294 36.677 -61.302 132.954 1.00 59.92 P
ATOM 25 OP1 G B 294 35.874 -62.553 133.092 1.00 60.33 O
ATOM 26 OP2 G B 294 36.410 -60.165 133.870 1.00 59.94 O
ATOM 27 O5' G B 294 38.210 -61.649 132.971 1.00 60.10 O
TER
ATOM 2 P A A 265 40.950 -46.503 134.430 1.00 55.81 P
ATOM 3 OP1 A A 265 40.521 -45.138 134.769 1.00 55.64 O
ATOM 4 OP2 A A 265 40.650 -47.605 135.367 1.00 56.43 O
ATOM 5 O5' A A 265 40.414 -46.874 132.997 1.00 55.26 O
ATOM 6 C5' A A 265 40.249 -45.867 132.017 1.00 54.64 C
ATOM 7 C4' A A 265 38.791 -45.575 131.733 1.00 54.39 C
ATOM 8 O4' A A 265 38.162 -46.748 131.162 1.00 54.38 O
ATOM 9 C3' A A 265 37.944 -45.175 132.930 1.00 54.76 C
ATOM 10 O3' A A 265 36.901 -44.313 132.482 1.00 54.36 O
ATOM 11 C2' A A 265 37.330 -46.490 133.328 1.00 55.17 C
ATOM 12 O2' A A 265 36.136 -46.343 134.050 1.00 55.39 O
ATOM 13 C1' A A 265 37.089 -47.133 131.964 1.00 54.74 C
ATOM 14 N9 A A 265 37.062 -48.580 131.980 1.00 55.07 N
ATOM 15 C8 A A 265 38.106 -49.444 131.897 1.00 55.27 C
ATOM 16 N7 A A 265 37.735 -50.704 131.902 1.00 55.56 N
ATOM 17 C5 A A 265 36.345 -50.665 131.969 1.00 55.52 C
ATOM 18 C6 A A 265 35.338 -51.655 132.017 1.00 55.75 C
ATOM 19 N6 A A 265 35.526 -52.960 131.987 1.00 56.06 N
ATOM 20 N1 A A 265 34.070 -51.246 132.076 1.00 55.63 N
ATOM 21 C2 A A 265 33.833 -49.930 132.100 1.00 55.33 C
ATOM 22 N3 A A 265 34.666 -48.882 132.042 1.00 55.08 N
ATOM 23 C4 A A 265 35.929 -49.341 131.985 1.00 55.20 C
ATOM 24 P G A 266 36.394 -43.077 133.377 1.00 58.04 P
ATOM 25 OP1 G A 266 37.584 -42.377 133.849 1.00 58.15 O
ATOM 26 OP2 G A 266 35.437 -43.616 134.383 1.00 58.53 O
ATOM 27 O5' G A 266 35.641 -42.158 132.320 1.00 57.41 O
TER
ATOM 1 O3' A B 292 32.325 -55.391 130.598 1.00 59.33 O
ATOM 2 P A B 293 33.093 -56.344 131.668 1.00 58.08 P
ATOM 3 OP1 A B 293 32.101 -57.294 132.193 1.00 58.53 O
ATOM 4 OP2 A B 293 33.812 -55.468 132.623 1.00 58.24 O
ATOM 5 O5' A B 293 34.127 -57.112 130.777 1.00 57.97 O
ATOM 6 C5' A B 293 34.223 -58.512 130.815 1.00 58.38 C
ATOM 7 C4' A B 293 35.514 -58.949 130.203 1.00 58.31 C
ATOM 8 O4' A B 293 36.104 -57.833 129.475 1.00 57.73 O
ATOM 9 C3' A B 293 36.568 -59.385 131.181 1.00 58.86 C
ATOM 10 O3' A B 293 36.455 -60.762 131.467 1.00 59.38 O
ATOM 11 C2' A B 293 37.885 -59.009 130.490 1.00 58.53 C
ATOM 12 O2' A B 293 38.315 -60.052 129.642 1.00 58.53 O
ATOM 13 C1' A B 293 37.487 -57.825 129.612 1.00 57.83 C
ATOM 14 N9 A B 293 37.875 -56.513 130.168 1.00 57.70 N
ATOM 15 C8 A B 293 37.109 -55.746 130.994 1.00 57.78 C
ATOM 16 N7 A B 293 37.659 -54.592 131.290 1.00 57.61 N
ATOM 17 C5 A B 293 38.847 -54.560 130.581 1.00 57.37 C
ATOM 18 C6 A B 293 39.860 -53.596 130.476 1.00 57.13 C
ATOM 19 N6 A B 293 39.855 -52.419 131.110 1.00 57.08 N
ATOM 20 N1 A B 293 40.907 -53.886 129.691 1.00 56.96 N
ATOM 21 C2 A B 293 40.927 -55.056 129.056 1.00 57.02 C
ATOM 22 N3 A B 293 40.043 -56.031 129.064 1.00 57.24 N
ATOM 23 C4 A B 293 39.000 -55.733 129.872 1.00 57.42 C
ATOM 24 P G B 294 36.677 -61.302 132.954 1.00 59.92 P
ATOM 25 OP1 G B 294 35.874 -62.553 133.092 1.00 60.33 O
ATOM 26 OP2 G B 294 36.410 -60.165 133.870 1.00 59.94 O
ATOM 27 O5' G B 294 38.210 -61.649 132.971 1.00 60.10 O
TER
Atoms:
OP1: (40.521,-45.138,134.769)
OP2: (40.650,-47.605,135.367)
C3': (37.944,-45.175,132.930)
C1': (37.089,-47.133,131.964)
C5': (40.249,-45.867,132.017)
O4': (38.162,-46.748,131.162)
C8: (38.106,-49.444,131.897)
O2': (36.136,-46.343,134.050)
C6: (35.338,-51.655,132.017)
C5: (36.345,-50.665,131.969)
C4: (35.929,-49.341,131.985)
P: (40.950,-46.503,134.430)
C4': (38.791,-45.575,131.733)
C2': (37.330,-46.490,133.328)
C2: (33.833,-49.930,132.100)
N1: (34.070,-51.246,132.076)
N3: (34.666,-48.882,132.042)
N6: (35.526,-52.960,131.987)
N7: (37.735,-50.704,131.902)
N9: (37.062,-48.580,131.980)
O5': (40.414,-46.874,132.997)
O3': (36.901,-44.313,132.482)
OP2: (40.650,-47.605,135.367)
C3': (37.944,-45.175,132.930)
C1': (37.089,-47.133,131.964)
C5': (40.249,-45.867,132.017)
O4': (38.162,-46.748,131.162)
C8: (38.106,-49.444,131.897)
O2': (36.136,-46.343,134.050)
C6: (35.338,-51.655,132.017)
C5: (36.345,-50.665,131.969)
C4: (35.929,-49.341,131.985)
P: (40.950,-46.503,134.430)
C4': (38.791,-45.575,131.733)
C2': (37.330,-46.490,133.328)
C2: (33.833,-49.930,132.100)
N1: (34.070,-51.246,132.076)
N3: (34.666,-48.882,132.042)
N6: (35.526,-52.960,131.987)
N7: (37.735,-50.704,131.902)
N9: (37.062,-48.580,131.980)
O5': (40.414,-46.874,132.997)
O3': (36.901,-44.313,132.482)
OP1: (32.101,-57.294,132.193)
OP2: (33.812,-55.468,132.623)
C3': (36.568,-59.385,131.181)
C1': (37.487,-57.825,129.612)
C5': (34.223,-58.512,130.815)
O4': (36.104,-57.833,129.475)
C8: (37.109,-55.746,130.994)
O2': (38.315,-60.052,129.642)
C6: (39.860,-53.596,130.476)
C5: (38.847,-54.560,130.581)
C4: (39.000,-55.733,129.872)
P: (33.093,-56.344,131.668)
C4': (35.514,-58.949,130.203)
C2': (37.885,-59.009,130.490)
C2: (40.927,-55.056,129.056)
N1: (40.907,-53.886,129.691)
N3: (40.043,-56.031,129.064)
N6: (39.855,-52.419,131.110)
N7: (37.659,-54.592,131.290)
N9: (37.875,-56.513,130.168)
O5': (34.127,-57.112,130.777)
O3': (36.455,-60.762,131.467)
OP2: (33.812,-55.468,132.623)
C3': (36.568,-59.385,131.181)
C1': (37.487,-57.825,129.612)
C5': (34.223,-58.512,130.815)
O4': (36.104,-57.833,129.475)
C8: (37.109,-55.746,130.994)
O2': (38.315,-60.052,129.642)
C6: (39.860,-53.596,130.476)
C5: (38.847,-54.560,130.581)
C4: (39.000,-55.733,129.872)
P: (33.093,-56.344,131.668)
C4': (35.514,-58.949,130.203)
C2': (37.885,-59.009,130.490)
C2: (40.927,-55.056,129.056)
N1: (40.907,-53.886,129.691)
N3: (40.043,-56.031,129.064)
N6: (39.855,-52.419,131.110)
N7: (37.659,-54.592,131.290)
N9: (37.875,-56.513,130.168)
O5': (34.127,-57.112,130.777)
O3': (36.455,-60.762,131.467)
Image (generated by PyMOL):