Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A1220:A1929
Extra
PDB:
ATOM 1 O3' G A1219 63.288 -79.803 -2.157 1.00 30.19 O
ATOM 2 P A A1220 62.137 -79.854 -0.996 1.00 34.57 P
ATOM 3 OP1 A A1220 61.447 -78.551 -0.813 1.00 24.77 O
ATOM 4 OP2 A A1220 62.786 -80.491 0.183 1.00 40.22 O
ATOM 5 O5' A A1220 61.052 -80.927 -1.482 1.00 31.78 O
ATOM 6 C5' A A1220 60.265 -81.622 -0.506 1.00 35.23 C
ATOM 7 C4' A A1220 59.191 -82.462 -1.160 1.00 35.84 C
ATOM 8 O4' A A1220 58.395 -81.624 -2.034 1.00 37.13 O
ATOM 9 C3' A A1220 59.646 -83.668 -1.986 1.00 39.95 C
ATOM 10 O3' A A1220 58.755 -84.758 -1.743 1.00 40.11 O
ATOM 11 C2' A A1220 59.518 -83.161 -3.424 1.00 38.31 C
ATOM 12 O2' A A1220 59.425 -84.184 -4.411 1.00 44.98 O
ATOM 13 C1' A A1220 58.318 -82.205 -3.318 1.00 40.96 C
ATOM 14 N9 A A1220 58.342 -81.106 -4.284 1.00 39.01 N
ATOM 15 C8 A A1220 58.970 -79.881 -4.186 1.00 37.94 C
ATOM 16 N7 A A1220 58.902 -79.168 -5.290 1.00 41.67 N
ATOM 17 C5 A A1220 58.156 -79.970 -6.157 1.00 39.02 C
ATOM 18 C6 A A1220 57.759 -79.810 -7.513 1.00 39.73 C
ATOM 19 N6 A A1220 58.074 -78.769 -8.278 1.00 42.99 N
ATOM 20 N1 A A1220 57.017 -80.794 -8.067 1.00 44.66 N
ATOM 21 C2 A A1220 56.709 -81.861 -7.319 1.00 50.56 C
ATOM 22 N3 A A1220 57.036 -82.138 -6.055 1.00 41.89 N
ATOM 23 C4 A A1220 57.772 -81.143 -5.530 1.00 38.58 C
ATOM 24 P G A1221 58.811 -85.550 -0.336 1.00 38.74 P
ATOM 25 OP1 G A1221 59.175 -84.603 0.767 1.00 27.19 O
ATOM 26 OP2 G A1221 59.633 -86.761 -0.578 1.00 34.19 O
ATOM 27 O5' G A1221 57.312 -86.070 -0.136 1.00 38.71 O
TER
ATOM 1 O3' A B1928 56.189 -76.514 -11.504 1.00 30.15 O
ATOM 2 P A B1929 57.675 -76.938 -11.872 1.00 37.49 P
ATOM 3 OP1 A B1929 57.718 -77.062 -13.348 1.00 44.51 O
ATOM 4 OP2 A B1929 58.058 -78.096 -11.013 1.00 38.69 O
ATOM 5 O5' A B1929 58.518 -75.665 -11.428 1.00 36.59 O
ATOM 6 C5' A B1929 58.181 -74.363 -11.898 1.00 32.65 C
ATOM 7 C4' A B1929 59.048 -73.352 -11.218 1.00 34.67 C
ATOM 8 O4' A B1929 58.656 -73.231 -9.833 1.00 38.88 O
ATOM 9 C3' A B1929 60.491 -73.796 -11.185 1.00 41.32 C
ATOM 10 O3' A B1929 61.085 -73.394 -12.411 1.00 38.81 O
ATOM 11 C2' A B1929 61.037 -73.118 -9.926 1.00 37.74 C
ATOM 12 O2' A B1929 61.409 -71.774 -10.093 1.00 41.72 O
ATOM 13 C1' A B1929 59.807 -73.089 -9.020 1.00 34.21 C
ATOM 14 N9 A B1929 59.796 -74.131 -7.996 1.00 32.03 N
ATOM 15 C8 A B1929 59.299 -75.405 -8.113 1.00 35.37 C
ATOM 16 N7 A B1929 59.421 -76.120 -7.025 1.00 34.35 N
ATOM 17 C5 A B1929 60.036 -75.263 -6.130 1.00 31.71 C
ATOM 18 C6 A B1929 60.430 -75.434 -4.815 1.00 31.05 C
ATOM 19 N6 A B1929 60.226 -76.568 -4.156 1.00 33.50 N
ATOM 20 N1 A B1929 61.037 -74.401 -4.187 1.00 29.82 N
ATOM 21 C2 A B1929 61.215 -73.263 -4.861 1.00 31.35 C
ATOM 22 N3 A B1929 60.876 -72.972 -6.117 1.00 34.08 N
ATOM 23 C4 A B1929 60.280 -74.034 -6.708 1.00 34.85 C
ATOM 24 P A B1930 62.177 -74.330 -13.136 1.00 40.74 P
ATOM 25 OP1 A B1930 61.788 -74.304 -14.569 1.00 26.17 O
ATOM 26 OP2 A B1930 62.326 -75.639 -12.450 1.00 35.44 O
ATOM 27 O5' A B1930 63.539 -73.519 -12.911 1.00 38.50 O
TER
ATOM 2 P A A1220 62.137 -79.854 -0.996 1.00 34.57 P
ATOM 3 OP1 A A1220 61.447 -78.551 -0.813 1.00 24.77 O
ATOM 4 OP2 A A1220 62.786 -80.491 0.183 1.00 40.22 O
ATOM 5 O5' A A1220 61.052 -80.927 -1.482 1.00 31.78 O
ATOM 6 C5' A A1220 60.265 -81.622 -0.506 1.00 35.23 C
ATOM 7 C4' A A1220 59.191 -82.462 -1.160 1.00 35.84 C
ATOM 8 O4' A A1220 58.395 -81.624 -2.034 1.00 37.13 O
ATOM 9 C3' A A1220 59.646 -83.668 -1.986 1.00 39.95 C
ATOM 10 O3' A A1220 58.755 -84.758 -1.743 1.00 40.11 O
ATOM 11 C2' A A1220 59.518 -83.161 -3.424 1.00 38.31 C
ATOM 12 O2' A A1220 59.425 -84.184 -4.411 1.00 44.98 O
ATOM 13 C1' A A1220 58.318 -82.205 -3.318 1.00 40.96 C
ATOM 14 N9 A A1220 58.342 -81.106 -4.284 1.00 39.01 N
ATOM 15 C8 A A1220 58.970 -79.881 -4.186 1.00 37.94 C
ATOM 16 N7 A A1220 58.902 -79.168 -5.290 1.00 41.67 N
ATOM 17 C5 A A1220 58.156 -79.970 -6.157 1.00 39.02 C
ATOM 18 C6 A A1220 57.759 -79.810 -7.513 1.00 39.73 C
ATOM 19 N6 A A1220 58.074 -78.769 -8.278 1.00 42.99 N
ATOM 20 N1 A A1220 57.017 -80.794 -8.067 1.00 44.66 N
ATOM 21 C2 A A1220 56.709 -81.861 -7.319 1.00 50.56 C
ATOM 22 N3 A A1220 57.036 -82.138 -6.055 1.00 41.89 N
ATOM 23 C4 A A1220 57.772 -81.143 -5.530 1.00 38.58 C
ATOM 24 P G A1221 58.811 -85.550 -0.336 1.00 38.74 P
ATOM 25 OP1 G A1221 59.175 -84.603 0.767 1.00 27.19 O
ATOM 26 OP2 G A1221 59.633 -86.761 -0.578 1.00 34.19 O
ATOM 27 O5' G A1221 57.312 -86.070 -0.136 1.00 38.71 O
TER
ATOM 1 O3' A B1928 56.189 -76.514 -11.504 1.00 30.15 O
ATOM 2 P A B1929 57.675 -76.938 -11.872 1.00 37.49 P
ATOM 3 OP1 A B1929 57.718 -77.062 -13.348 1.00 44.51 O
ATOM 4 OP2 A B1929 58.058 -78.096 -11.013 1.00 38.69 O
ATOM 5 O5' A B1929 58.518 -75.665 -11.428 1.00 36.59 O
ATOM 6 C5' A B1929 58.181 -74.363 -11.898 1.00 32.65 C
ATOM 7 C4' A B1929 59.048 -73.352 -11.218 1.00 34.67 C
ATOM 8 O4' A B1929 58.656 -73.231 -9.833 1.00 38.88 O
ATOM 9 C3' A B1929 60.491 -73.796 -11.185 1.00 41.32 C
ATOM 10 O3' A B1929 61.085 -73.394 -12.411 1.00 38.81 O
ATOM 11 C2' A B1929 61.037 -73.118 -9.926 1.00 37.74 C
ATOM 12 O2' A B1929 61.409 -71.774 -10.093 1.00 41.72 O
ATOM 13 C1' A B1929 59.807 -73.089 -9.020 1.00 34.21 C
ATOM 14 N9 A B1929 59.796 -74.131 -7.996 1.00 32.03 N
ATOM 15 C8 A B1929 59.299 -75.405 -8.113 1.00 35.37 C
ATOM 16 N7 A B1929 59.421 -76.120 -7.025 1.00 34.35 N
ATOM 17 C5 A B1929 60.036 -75.263 -6.130 1.00 31.71 C
ATOM 18 C6 A B1929 60.430 -75.434 -4.815 1.00 31.05 C
ATOM 19 N6 A B1929 60.226 -76.568 -4.156 1.00 33.50 N
ATOM 20 N1 A B1929 61.037 -74.401 -4.187 1.00 29.82 N
ATOM 21 C2 A B1929 61.215 -73.263 -4.861 1.00 31.35 C
ATOM 22 N3 A B1929 60.876 -72.972 -6.117 1.00 34.08 N
ATOM 23 C4 A B1929 60.280 -74.034 -6.708 1.00 34.85 C
ATOM 24 P A B1930 62.177 -74.330 -13.136 1.00 40.74 P
ATOM 25 OP1 A B1930 61.788 -74.304 -14.569 1.00 26.17 O
ATOM 26 OP2 A B1930 62.326 -75.639 -12.450 1.00 35.44 O
ATOM 27 O5' A B1930 63.539 -73.519 -12.911 1.00 38.50 O
TER
Atoms:
OP1: (61.447,-78.551,-0.813)
OP2: (62.786,-80.491,0.183)
C3': (59.646,-83.668,-1.986)
C1': (58.318,-82.205,-3.318)
C5': (60.265,-81.622,-0.506)
O4': (58.395,-81.624,-2.034)
C8: (58.970,-79.881,-4.186)
O2': (59.425,-84.184,-4.411)
C6: (57.759,-79.810,-7.513)
C5: (58.156,-79.970,-6.157)
C4: (57.772,-81.143,-5.530)
P: (62.137,-79.854,-0.996)
C4': (59.191,-82.462,-1.160)
C2': (59.518,-83.161,-3.424)
C2: (56.709,-81.861,-7.319)
N1: (57.017,-80.794,-8.067)
N3: (57.036,-82.138,-6.055)
N6: (58.074,-78.769,-8.278)
N7: (58.902,-79.168,-5.290)
N9: (58.342,-81.106,-4.284)
O5': (61.052,-80.927,-1.482)
O3': (58.755,-84.758,-1.743)
OP2: (62.786,-80.491,0.183)
C3': (59.646,-83.668,-1.986)
C1': (58.318,-82.205,-3.318)
C5': (60.265,-81.622,-0.506)
O4': (58.395,-81.624,-2.034)
C8: (58.970,-79.881,-4.186)
O2': (59.425,-84.184,-4.411)
C6: (57.759,-79.810,-7.513)
C5: (58.156,-79.970,-6.157)
C4: (57.772,-81.143,-5.530)
P: (62.137,-79.854,-0.996)
C4': (59.191,-82.462,-1.160)
C2': (59.518,-83.161,-3.424)
C2: (56.709,-81.861,-7.319)
N1: (57.017,-80.794,-8.067)
N3: (57.036,-82.138,-6.055)
N6: (58.074,-78.769,-8.278)
N7: (58.902,-79.168,-5.290)
N9: (58.342,-81.106,-4.284)
O5': (61.052,-80.927,-1.482)
O3': (58.755,-84.758,-1.743)
OP1: (57.718,-77.062,-13.348)
OP2: (58.058,-78.096,-11.013)
C3': (60.491,-73.796,-11.185)
C1': (59.807,-73.089,-9.020)
C5': (58.181,-74.363,-11.898)
O4': (58.656,-73.231,-9.833)
C8: (59.299,-75.405,-8.113)
O2': (61.409,-71.774,-10.093)
C6: (60.430,-75.434,-4.815)
C5: (60.036,-75.263,-6.130)
C4: (60.280,-74.034,-6.708)
P: (57.675,-76.938,-11.872)
C4': (59.048,-73.352,-11.218)
C2': (61.037,-73.118,-9.926)
C2: (61.215,-73.263,-4.861)
N1: (61.037,-74.401,-4.187)
N3: (60.876,-72.972,-6.117)
N6: (60.226,-76.568,-4.156)
N7: (59.421,-76.120,-7.025)
N9: (59.796,-74.131,-7.996)
O5': (58.518,-75.665,-11.428)
O3': (61.085,-73.394,-12.411)
OP2: (58.058,-78.096,-11.013)
C3': (60.491,-73.796,-11.185)
C1': (59.807,-73.089,-9.020)
C5': (58.181,-74.363,-11.898)
O4': (58.656,-73.231,-9.833)
C8: (59.299,-75.405,-8.113)
O2': (61.409,-71.774,-10.093)
C6: (60.430,-75.434,-4.815)
C5: (60.036,-75.263,-6.130)
C4: (60.280,-74.034,-6.708)
P: (57.675,-76.938,-11.872)
C4': (59.048,-73.352,-11.218)
C2': (61.037,-73.118,-9.926)
C2: (61.215,-73.263,-4.861)
N1: (61.037,-74.401,-4.187)
N3: (60.876,-72.972,-6.117)
N6: (60.226,-76.568,-4.156)
N7: (59.421,-76.120,-7.025)
N9: (59.796,-74.131,-7.996)
O5': (58.518,-75.665,-11.428)
O3': (61.085,-73.394,-12.411)
Image (generated by PyMOL):