Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01328:02001
Extra
PDB:
ATOM 1 O3' U A1327 44.621 144.833 94.941 1.00 43.18 O
ATOM 2 P A A1328 45.242 146.255 95.353 1.00 42.10 P
ATOM 3 OP1 A A1328 46.449 146.462 94.531 1.00 43.06 O
ATOM 4 OP2 A A1328 45.350 146.291 96.829 1.00 41.79 O
ATOM 5 O5' A A1328 44.143 147.313 94.895 1.00 43.35 O
ATOM 6 C5' A A1328 44.072 148.618 95.507 1.00 43.44 C
ATOM 7 C4' A A1328 43.470 149.623 94.548 1.00 43.44 C
ATOM 8 O4' A A1328 44.354 149.801 93.407 1.00 43.29 O
ATOM 9 C3' A A1328 42.103 149.287 93.964 1.00 41.92 C
ATOM 10 O3' A A1328 41.465 150.542 93.699 1.00 43.19 O
ATOM 11 C2' A A1328 42.493 148.595 92.661 1.00 42.01 C
ATOM 12 O2' A A1328 41.458 148.585 91.703 1.00 41.88 O
ATOM 13 C1' A A1328 43.671 149.466 92.220 1.00 42.20 C
ATOM 14 N9 A A1328 44.631 148.836 91.316 1.00 43.08 N
ATOM 15 C8 A A1328 45.527 147.841 91.606 1.00 44.53 C
ATOM 16 N7 A A1328 46.255 147.468 90.583 1.00 45.05 N
ATOM 17 C5 A A1328 45.809 148.273 89.546 1.00 45.03 C
ATOM 18 C6 A A1328 46.163 148.347 88.187 1.00 45.17 C
ATOM 19 N6 A A1328 47.057 147.545 87.610 1.00 46.16 N
ATOM 20 N1 A A1328 45.541 149.269 87.424 1.00 44.33 N
ATOM 21 C2 A A1328 44.602 150.033 87.989 1.00 44.93 C
ATOM 22 N3 A A1328 44.161 150.040 89.247 1.00 45.86 N
ATOM 23 C4 A A1328 44.816 149.128 89.986 1.00 45.14 C
ATOM 24 P G A1329 39.886 150.737 93.945 1.00 43.14 P
ATOM 25 OP1 G A1329 39.499 150.353 95.326 1.00 39.50 O
ATOM 26 OP2 G A1329 39.228 150.089 92.798 1.00 44.42 O
ATOM 27 O5' G A1329 39.683 152.307 93.757 1.00 42.38 O
TER
ATOM 1 O3' A B2000 49.532 148.083 83.582 1.00 40.24 O
ATOM 2 P A B2001 48.875 146.647 83.838 1.00 40.11 P
ATOM 3 OP1 A B2001 48.651 146.061 82.501 1.00 40.46 O
ATOM 4 OP2 A B2001 47.731 146.807 84.775 1.00 40.52 O
ATOM 5 O5' A B2001 50.020 145.828 84.577 1.00 41.44 O
ATOM 6 C5' A B2001 51.352 145.790 84.035 1.00 41.76 C
ATOM 7 C4' A B2001 52.313 145.261 85.061 1.00 41.47 C
ATOM 8 O4' A B2001 52.313 146.144 86.208 1.00 39.75 O
ATOM 9 C3' A B2001 51.959 143.901 85.639 1.00 42.66 C
ATOM 10 O3' A B2001 52.414 142.852 84.789 1.00 44.45 O
ATOM 11 C2' A B2001 52.690 143.929 86.972 1.00 41.88 C
ATOM 12 O2' A B2001 54.073 143.704 86.817 1.00 42.07 O
ATOM 13 C1' A B2001 52.483 145.385 87.394 1.00 40.90 C
ATOM 14 N9 A B2001 51.316 145.610 88.255 1.00 41.99 N
ATOM 15 C8 A B2001 50.099 146.126 87.885 1.00 42.21 C
ATOM 16 N7 A B2001 49.259 146.267 88.884 1.00 43.23 N
ATOM 17 C5 A B2001 49.964 145.802 89.986 1.00 41.59 C
ATOM 18 C6 A B2001 49.628 145.694 91.353 1.00 41.15 C
ATOM 19 N6 A B2001 48.452 146.068 91.870 1.00 38.30 N
ATOM 20 N1 A B2001 50.558 145.183 92.183 1.00 41.30 N
ATOM 21 C2 A B2001 51.735 144.809 91.673 1.00 41.92 C
ATOM 22 N3 A B2001 52.168 144.863 90.419 1.00 42.05 N
ATOM 23 C4 A B2001 51.226 145.377 89.612 1.00 41.67 C
ATOM 24 P C B2002 51.723 141.403 84.853 1.00 44.03 P
ATOM 25 OP1 C B2002 52.346 140.630 83.756 1.00 43.76 O
ATOM 26 OP2 C B2002 50.251 141.566 84.881 1.00 45.24 O
ATOM 27 O5' C B2002 52.210 140.789 86.246 1.00 43.45 O
TER
ATOM 2 P A A1328 45.242 146.255 95.353 1.00 42.10 P
ATOM 3 OP1 A A1328 46.449 146.462 94.531 1.00 43.06 O
ATOM 4 OP2 A A1328 45.350 146.291 96.829 1.00 41.79 O
ATOM 5 O5' A A1328 44.143 147.313 94.895 1.00 43.35 O
ATOM 6 C5' A A1328 44.072 148.618 95.507 1.00 43.44 C
ATOM 7 C4' A A1328 43.470 149.623 94.548 1.00 43.44 C
ATOM 8 O4' A A1328 44.354 149.801 93.407 1.00 43.29 O
ATOM 9 C3' A A1328 42.103 149.287 93.964 1.00 41.92 C
ATOM 10 O3' A A1328 41.465 150.542 93.699 1.00 43.19 O
ATOM 11 C2' A A1328 42.493 148.595 92.661 1.00 42.01 C
ATOM 12 O2' A A1328 41.458 148.585 91.703 1.00 41.88 O
ATOM 13 C1' A A1328 43.671 149.466 92.220 1.00 42.20 C
ATOM 14 N9 A A1328 44.631 148.836 91.316 1.00 43.08 N
ATOM 15 C8 A A1328 45.527 147.841 91.606 1.00 44.53 C
ATOM 16 N7 A A1328 46.255 147.468 90.583 1.00 45.05 N
ATOM 17 C5 A A1328 45.809 148.273 89.546 1.00 45.03 C
ATOM 18 C6 A A1328 46.163 148.347 88.187 1.00 45.17 C
ATOM 19 N6 A A1328 47.057 147.545 87.610 1.00 46.16 N
ATOM 20 N1 A A1328 45.541 149.269 87.424 1.00 44.33 N
ATOM 21 C2 A A1328 44.602 150.033 87.989 1.00 44.93 C
ATOM 22 N3 A A1328 44.161 150.040 89.247 1.00 45.86 N
ATOM 23 C4 A A1328 44.816 149.128 89.986 1.00 45.14 C
ATOM 24 P G A1329 39.886 150.737 93.945 1.00 43.14 P
ATOM 25 OP1 G A1329 39.499 150.353 95.326 1.00 39.50 O
ATOM 26 OP2 G A1329 39.228 150.089 92.798 1.00 44.42 O
ATOM 27 O5' G A1329 39.683 152.307 93.757 1.00 42.38 O
TER
ATOM 1 O3' A B2000 49.532 148.083 83.582 1.00 40.24 O
ATOM 2 P A B2001 48.875 146.647 83.838 1.00 40.11 P
ATOM 3 OP1 A B2001 48.651 146.061 82.501 1.00 40.46 O
ATOM 4 OP2 A B2001 47.731 146.807 84.775 1.00 40.52 O
ATOM 5 O5' A B2001 50.020 145.828 84.577 1.00 41.44 O
ATOM 6 C5' A B2001 51.352 145.790 84.035 1.00 41.76 C
ATOM 7 C4' A B2001 52.313 145.261 85.061 1.00 41.47 C
ATOM 8 O4' A B2001 52.313 146.144 86.208 1.00 39.75 O
ATOM 9 C3' A B2001 51.959 143.901 85.639 1.00 42.66 C
ATOM 10 O3' A B2001 52.414 142.852 84.789 1.00 44.45 O
ATOM 11 C2' A B2001 52.690 143.929 86.972 1.00 41.88 C
ATOM 12 O2' A B2001 54.073 143.704 86.817 1.00 42.07 O
ATOM 13 C1' A B2001 52.483 145.385 87.394 1.00 40.90 C
ATOM 14 N9 A B2001 51.316 145.610 88.255 1.00 41.99 N
ATOM 15 C8 A B2001 50.099 146.126 87.885 1.00 42.21 C
ATOM 16 N7 A B2001 49.259 146.267 88.884 1.00 43.23 N
ATOM 17 C5 A B2001 49.964 145.802 89.986 1.00 41.59 C
ATOM 18 C6 A B2001 49.628 145.694 91.353 1.00 41.15 C
ATOM 19 N6 A B2001 48.452 146.068 91.870 1.00 38.30 N
ATOM 20 N1 A B2001 50.558 145.183 92.183 1.00 41.30 N
ATOM 21 C2 A B2001 51.735 144.809 91.673 1.00 41.92 C
ATOM 22 N3 A B2001 52.168 144.863 90.419 1.00 42.05 N
ATOM 23 C4 A B2001 51.226 145.377 89.612 1.00 41.67 C
ATOM 24 P C B2002 51.723 141.403 84.853 1.00 44.03 P
ATOM 25 OP1 C B2002 52.346 140.630 83.756 1.00 43.76 O
ATOM 26 OP2 C B2002 50.251 141.566 84.881 1.00 45.24 O
ATOM 27 O5' C B2002 52.210 140.789 86.246 1.00 43.45 O
TER
Atoms:
OP1: (46.449,146.462,94.531)
OP2: (45.350,146.291,96.829)
C3': (42.103,149.287,93.964)
C1': (43.671,149.466,92.220)
C5': (44.072,148.618,95.507)
O4': (44.354,149.801,93.407)
C8: (45.527,147.841,91.606)
O2': (41.458,148.585,91.703)
C6: (46.163,148.347,88.187)
C5: (45.809,148.273,89.546)
C4: (44.816,149.128,89.986)
P: (45.242,146.255,95.353)
C4': (43.470,149.623,94.548)
C2': (42.493,148.595,92.661)
C2: (44.602,150.033,87.989)
N1: (45.541,149.269,87.424)
N3: (44.161,150.040,89.247)
N6: (47.057,147.545,87.610)
N7: (46.255,147.468,90.583)
N9: (44.631,148.836,91.316)
O5': (44.143,147.313,94.895)
O3': (41.465,150.542,93.699)
OP2: (45.350,146.291,96.829)
C3': (42.103,149.287,93.964)
C1': (43.671,149.466,92.220)
C5': (44.072,148.618,95.507)
O4': (44.354,149.801,93.407)
C8: (45.527,147.841,91.606)
O2': (41.458,148.585,91.703)
C6: (46.163,148.347,88.187)
C5: (45.809,148.273,89.546)
C4: (44.816,149.128,89.986)
P: (45.242,146.255,95.353)
C4': (43.470,149.623,94.548)
C2': (42.493,148.595,92.661)
C2: (44.602,150.033,87.989)
N1: (45.541,149.269,87.424)
N3: (44.161,150.040,89.247)
N6: (47.057,147.545,87.610)
N7: (46.255,147.468,90.583)
N9: (44.631,148.836,91.316)
O5': (44.143,147.313,94.895)
O3': (41.465,150.542,93.699)
OP1: (48.651,146.061,82.501)
OP2: (47.731,146.807,84.775)
C3': (51.959,143.901,85.639)
C1': (52.483,145.385,87.394)
C5': (51.352,145.790,84.035)
O4': (52.313,146.144,86.208)
C8: (50.099,146.126,87.885)
O2': (54.073,143.704,86.817)
C6: (49.628,145.694,91.353)
C5: (49.964,145.802,89.986)
C4: (51.226,145.377,89.612)
P: (48.875,146.647,83.838)
C4': (52.313,145.261,85.061)
C2': (52.690,143.929,86.972)
C2: (51.735,144.809,91.673)
N1: (50.558,145.183,92.183)
N3: (52.168,144.863,90.419)
N6: (48.452,146.068,91.870)
N7: (49.259,146.267,88.884)
N9: (51.316,145.610,88.255)
O5': (50.020,145.828,84.577)
O3': (52.414,142.852,84.789)
OP2: (47.731,146.807,84.775)
C3': (51.959,143.901,85.639)
C1': (52.483,145.385,87.394)
C5': (51.352,145.790,84.035)
O4': (52.313,146.144,86.208)
C8: (50.099,146.126,87.885)
O2': (54.073,143.704,86.817)
C6: (49.628,145.694,91.353)
C5: (49.964,145.802,89.986)
C4: (51.226,145.377,89.612)
P: (48.875,146.647,83.838)
C4': (52.313,145.261,85.061)
C2': (52.690,143.929,86.972)
C2: (51.735,144.809,91.673)
N1: (50.558,145.183,92.183)
N3: (52.168,144.863,90.419)
N6: (48.452,146.068,91.870)
N7: (49.259,146.267,88.884)
N9: (51.316,145.610,88.255)
O5': (50.020,145.828,84.577)
O3': (52.414,142.852,84.789)
Image (generated by PyMOL):