ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQE:A861:A880

Extra

PDB:
ATOM 1 O3' G A 860 176.098 85.531 -20.890 1.00 33.97 O
ATOM 2 P A A 861 175.819 85.124 -22.419 1.00 34.33 P
ATOM 3 OP1 A A 861 174.548 84.348 -22.474 1.00 35.07 O
ATOM 4 OP2 A A 861 177.071 84.547 -22.967 1.00 34.57 O
ATOM 5 O5' A A 861 175.573 86.475 -23.155 1.00 35.47 O
ATOM 6 C5' A A 861 175.578 86.518 -24.581 1.00 36.26 C
ATOM 7 C4' A A 861 174.490 87.424 -25.065 1.00 37.67 C
ATOM 8 O4' A A 861 173.195 86.852 -24.742 1.00 39.20 O
ATOM 9 C3' A A 861 174.506 88.821 -24.462 1.00 38.33 C
ATOM 10 O3' A A 861 174.063 89.690 -25.450 1.00 39.20 O
ATOM 11 C2' A A 861 173.417 88.756 -23.400 1.00 38.34 C
ATOM 12 O2' A A 861 172.840 90.024 -23.177 1.00 39.58 O
ATOM 13 C1' A A 861 172.415 87.818 -24.070 1.00 38.42 C
ATOM 14 N9 A A 861 171.479 87.140 -23.175 1.00 37.19 N
ATOM 15 C8 A A 861 171.713 86.078 -22.342 1.00 37.71 C
ATOM 16 N7 A A 861 170.665 85.713 -21.647 1.00 37.59 N
ATOM 17 C5 A A 861 169.672 86.592 -22.056 1.00 36.97 C
ATOM 18 C6 A A 861 168.328 86.730 -21.687 1.00 37.24 C
ATOM 19 N6 A A 861 167.725 85.949 -20.786 1.00 38.13 N
ATOM 20 N1 A A 861 167.613 87.708 -22.282 1.00 36.72 N
ATOM 21 C2 A A 861 168.219 88.483 -23.187 1.00 35.19 C
ATOM 22 N3 A A 861 169.472 88.449 -23.617 1.00 35.10 N
ATOM 23 C4 A A 861 170.156 87.469 -23.003 1.00 36.38 C
ATOM 24 P G A 862 175.114 90.564 -26.267 1.00 41.07 P
ATOM 25 OP1 G A 862 176.104 89.609 -26.854 1.00 40.34 O
ATOM 26 OP2 G A 862 175.570 91.664 -25.376 1.00 42.29 O
ATOM 27 O5' G A 862 174.218 91.151 -27.437 1.00 39.82 O
TER

ATOM 1 O3' A B 879 163.091 85.322 -20.151 1.00 38.63 O
ATOM 2 P A B 880 163.821 85.756 -18.792 1.00 41.59 P
ATOM 3 OP1 A B 880 162.747 86.303 -17.905 1.00 44.18 O
ATOM 4 OP2 A B 880 164.990 86.603 -19.124 1.00 40.97 O
ATOM 5 O5' A B 880 164.319 84.380 -18.164 1.00 39.91 O
ATOM 6 C5' A B 880 163.379 83.360 -17.795 1.00 38.71 C
ATOM 7 C4' A B 880 164.107 82.120 -17.346 1.00 39.72 C
ATOM 8 O4' A B 880 164.879 81.586 -18.450 1.00 39.96 O
ATOM 9 C3' A B 880 165.124 82.322 -16.234 1.00 40.69 C
ATOM 10 O3' A B 880 164.517 82.271 -14.961 1.00 41.28 O
ATOM 11 C2' A B 880 166.088 81.160 -16.442 1.00 40.88 C
ATOM 12 O2' A B 880 165.629 79.947 -15.878 1.00 41.23 O
ATOM 13 C1' A B 880 166.095 81.032 -17.966 1.00 40.08 C
ATOM 14 N9 A B 880 167.214 81.764 -18.562 1.00 38.61 N
ATOM 15 C8 A B 880 167.176 82.951 -19.253 1.00 39.00 C
ATOM 16 N7 A B 880 168.351 83.370 -19.646 1.00 37.51 N
ATOM 17 C5 A B 880 169.221 82.391 -19.191 1.00 36.35 C
ATOM 18 C6 A B 880 170.605 82.248 -19.294 1.00 36.54 C
ATOM 19 N6 A B 880 171.389 83.124 -19.933 1.00 39.33 N
ATOM 20 N1 A B 880 171.171 81.165 -18.722 1.00 35.48 N
ATOM 21 C2 A B 880 170.384 80.290 -18.098 1.00 35.39 C
ATOM 22 N3 A B 880 169.066 80.309 -17.942 1.00 37.17 N
ATOM 23 C4 A B 880 168.537 81.399 -18.521 1.00 37.02 C
ATOM 24 P A B 881 165.201 83.033 -13.728 1.00 42.01 P
ATOM 25 OP1 A B 881 164.166 83.105 -12.651 1.00 43.89 O
ATOM 26 OP2 A B 881 165.849 84.280 -14.250 1.00 41.49 O
ATOM 27 O5' A B 881 166.319 82.029 -13.230 1.00 40.03 O
TER

Atoms:
OP1: (174.548,84.348,-22.474)
OP2: (177.071,84.547,-22.967)
C3': (174.506,88.821,-24.462)
C1': (172.415,87.818,-24.070)
C5': (175.578,86.518,-24.581)
O4': (173.195,86.852,-24.742)
C8: (171.713,86.078,-22.342)
O2': (172.840,90.024,-23.177)
C6: (168.328,86.730,-21.687)
C5: (169.672,86.592,-22.056)
C4: (170.156,87.469,-23.003)
P: (175.819,85.124,-22.419)
C4': (174.490,87.424,-25.065)
C2': (173.417,88.756,-23.400)
C2: (168.219,88.483,-23.187)
N1: (167.613,87.708,-22.282)
N3: (169.472,88.449,-23.617)
N6: (167.725,85.949,-20.786)
N7: (170.665,85.713,-21.647)
N9: (171.479,87.140,-23.175)
O5': (175.573,86.475,-23.155)
O3': (174.063,89.690,-25.450)
OP1: (162.747,86.303,-17.905)
OP2: (164.990,86.603,-19.124)
C3': (165.124,82.322,-16.234)
C1': (166.095,81.032,-17.966)
C5': (163.379,83.360,-17.795)
O4': (164.879,81.586,-18.450)
C8: (167.176,82.951,-19.253)
O2': (165.629,79.947,-15.878)
C6: (170.605,82.248,-19.294)
C5: (169.221,82.391,-19.191)
C4: (168.537,81.399,-18.521)
P: (163.821,85.756,-18.792)
C4': (164.107,82.120,-17.346)
C2': (166.088,81.160,-16.442)
C2: (170.384,80.290,-18.098)
N1: (171.171,81.165,-18.722)
N3: (169.066,80.309,-17.942)
N6: (171.389,83.124,-19.933)
N7: (168.351,83.370,-19.646)
N9: (167.214,81.764,-18.562)
O5': (164.319,84.380,-18.164)
O3': (164.517,82.271,-14.961)
Image (generated by PyMOL):
PyMOL image
show in jmol