Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01091:01189
Extra
PDB:
ATOM 1 O3' G A1090 49.102 96.990 130.092 1.00 44.21 O
ATOM 2 P A A1091 49.231 96.401 131.579 1.00 44.04 P
ATOM 3 OP1 A A1091 48.153 95.381 131.705 1.00 42.06 O
ATOM 4 OP2 A A1091 49.316 97.512 132.561 1.00 45.01 O
ATOM 5 O5' A A1091 50.645 95.679 131.585 1.00 40.96 O
ATOM 6 C5' A A1091 50.997 94.761 130.550 1.00 39.70 C
ATOM 7 C4' A A1091 52.476 94.533 130.564 1.00 40.18 C
ATOM 8 O4' A A1091 53.141 95.808 130.397 1.00 41.06 O
ATOM 9 C3' A A1091 53.014 94.009 131.880 1.00 40.61 C
ATOM 10 O3' A A1091 52.869 92.600 131.949 1.00 41.10 O
ATOM 11 C2' A A1091 54.462 94.469 131.840 1.00 40.88 C
ATOM 12 O2' A A1091 55.248 93.656 130.988 1.00 42.17 O
ATOM 13 C1' A A1091 54.309 95.847 131.197 1.00 40.66 C
ATOM 14 N9 A A1091 54.183 96.977 132.122 1.00 40.11 N
ATOM 15 C8 A A1091 53.040 97.667 132.461 1.00 40.84 C
ATOM 16 N7 A A1091 53.256 98.693 133.251 1.00 39.65 N
ATOM 17 C5 A A1091 54.626 98.666 133.463 1.00 39.21 C
ATOM 18 C6 A A1091 55.483 99.499 134.198 1.00 38.54 C
ATOM 19 N6 A A1091 55.075 100.568 134.876 1.00 40.12 N
ATOM 20 N1 A A1091 56.795 99.194 134.208 1.00 38.74 N
ATOM 21 C2 A A1091 57.209 98.123 133.523 1.00 39.89 C
ATOM 22 N3 A A1091 56.505 97.268 132.789 1.00 39.49 N
ATOM 23 C4 A A1091 55.205 97.600 132.795 1.00 39.80 C
ATOM 24 P A A1092 52.586 91.901 133.364 1.00 43.64 P
ATOM 25 OP1 A A1092 52.002 90.563 133.076 1.00 43.27 O
ATOM 26 OP2 A A1092 51.868 92.849 134.258 1.00 43.08 O
ATOM 27 O5' A A1092 54.035 91.671 133.962 1.00 41.76 O
TER
ATOM 1 O3' C B1188 55.844 103.485 138.185 1.00 41.20 O
ATOM 2 P A B1189 56.163 104.108 136.743 1.00 45.51 P
ATOM 3 OP1 A B1189 55.992 103.027 135.736 1.00 43.90 O
ATOM 4 OP2 A B1189 57.458 104.824 136.847 1.00 42.61 O
ATOM 5 O5' A B1189 55.025 105.196 136.498 1.00 43.06 O
ATOM 6 C5' A B1189 55.240 106.273 135.569 1.00 43.47 C
ATOM 7 C4' A B1189 53.920 106.809 135.063 1.00 44.92 C
ATOM 8 O4' A B1189 53.278 105.795 134.251 1.00 46.30 O
ATOM 9 C3' A B1189 52.896 107.224 136.114 1.00 43.65 C
ATOM 10 O3' A B1189 52.122 108.309 135.598 1.00 42.63 O
ATOM 11 C2' A B1189 52.039 105.965 136.246 1.00 43.73 C
ATOM 12 O2' A B1189 50.715 106.230 136.653 1.00 45.16 O
ATOM 13 C1' A B1189 52.025 105.454 134.809 1.00 43.95 C
ATOM 14 N9 A B1189 51.885 104.012 134.680 1.00 42.90 N
ATOM 15 C8 A B1189 52.857 103.080 134.915 1.00 46.30 C
ATOM 16 N7 A B1189 52.498 101.857 134.623 1.00 48.47 N
ATOM 17 C5 A B1189 51.194 101.992 134.182 1.00 45.96 C
ATOM 18 C6 A B1189 50.275 101.066 133.691 1.00 46.53 C
ATOM 19 N6 A B1189 50.543 99.765 133.556 1.00 47.27 N
ATOM 20 N1 A B1189 49.058 101.521 133.329 1.00 46.25 N
ATOM 21 C2 A B1189 48.804 102.823 133.456 1.00 44.90 C
ATOM 22 N3 A B1189 49.595 103.797 133.897 1.00 45.38 N
ATOM 23 C4 A B1189 50.792 103.310 134.244 1.00 44.50 C
ATOM 24 P A B1190 52.518 109.829 135.965 1.00 44.79 P
ATOM 25 OP1 A B1190 52.904 109.933 137.390 1.00 44.68 O
ATOM 26 OP2 A B1190 51.421 110.674 135.454 1.00 46.17 O
ATOM 27 O5' A B1190 53.821 110.120 135.092 1.00 44.54 O
TER
ATOM 2 P A A1091 49.231 96.401 131.579 1.00 44.04 P
ATOM 3 OP1 A A1091 48.153 95.381 131.705 1.00 42.06 O
ATOM 4 OP2 A A1091 49.316 97.512 132.561 1.00 45.01 O
ATOM 5 O5' A A1091 50.645 95.679 131.585 1.00 40.96 O
ATOM 6 C5' A A1091 50.997 94.761 130.550 1.00 39.70 C
ATOM 7 C4' A A1091 52.476 94.533 130.564 1.00 40.18 C
ATOM 8 O4' A A1091 53.141 95.808 130.397 1.00 41.06 O
ATOM 9 C3' A A1091 53.014 94.009 131.880 1.00 40.61 C
ATOM 10 O3' A A1091 52.869 92.600 131.949 1.00 41.10 O
ATOM 11 C2' A A1091 54.462 94.469 131.840 1.00 40.88 C
ATOM 12 O2' A A1091 55.248 93.656 130.988 1.00 42.17 O
ATOM 13 C1' A A1091 54.309 95.847 131.197 1.00 40.66 C
ATOM 14 N9 A A1091 54.183 96.977 132.122 1.00 40.11 N
ATOM 15 C8 A A1091 53.040 97.667 132.461 1.00 40.84 C
ATOM 16 N7 A A1091 53.256 98.693 133.251 1.00 39.65 N
ATOM 17 C5 A A1091 54.626 98.666 133.463 1.00 39.21 C
ATOM 18 C6 A A1091 55.483 99.499 134.198 1.00 38.54 C
ATOM 19 N6 A A1091 55.075 100.568 134.876 1.00 40.12 N
ATOM 20 N1 A A1091 56.795 99.194 134.208 1.00 38.74 N
ATOM 21 C2 A A1091 57.209 98.123 133.523 1.00 39.89 C
ATOM 22 N3 A A1091 56.505 97.268 132.789 1.00 39.49 N
ATOM 23 C4 A A1091 55.205 97.600 132.795 1.00 39.80 C
ATOM 24 P A A1092 52.586 91.901 133.364 1.00 43.64 P
ATOM 25 OP1 A A1092 52.002 90.563 133.076 1.00 43.27 O
ATOM 26 OP2 A A1092 51.868 92.849 134.258 1.00 43.08 O
ATOM 27 O5' A A1092 54.035 91.671 133.962 1.00 41.76 O
TER
ATOM 1 O3' C B1188 55.844 103.485 138.185 1.00 41.20 O
ATOM 2 P A B1189 56.163 104.108 136.743 1.00 45.51 P
ATOM 3 OP1 A B1189 55.992 103.027 135.736 1.00 43.90 O
ATOM 4 OP2 A B1189 57.458 104.824 136.847 1.00 42.61 O
ATOM 5 O5' A B1189 55.025 105.196 136.498 1.00 43.06 O
ATOM 6 C5' A B1189 55.240 106.273 135.569 1.00 43.47 C
ATOM 7 C4' A B1189 53.920 106.809 135.063 1.00 44.92 C
ATOM 8 O4' A B1189 53.278 105.795 134.251 1.00 46.30 O
ATOM 9 C3' A B1189 52.896 107.224 136.114 1.00 43.65 C
ATOM 10 O3' A B1189 52.122 108.309 135.598 1.00 42.63 O
ATOM 11 C2' A B1189 52.039 105.965 136.246 1.00 43.73 C
ATOM 12 O2' A B1189 50.715 106.230 136.653 1.00 45.16 O
ATOM 13 C1' A B1189 52.025 105.454 134.809 1.00 43.95 C
ATOM 14 N9 A B1189 51.885 104.012 134.680 1.00 42.90 N
ATOM 15 C8 A B1189 52.857 103.080 134.915 1.00 46.30 C
ATOM 16 N7 A B1189 52.498 101.857 134.623 1.00 48.47 N
ATOM 17 C5 A B1189 51.194 101.992 134.182 1.00 45.96 C
ATOM 18 C6 A B1189 50.275 101.066 133.691 1.00 46.53 C
ATOM 19 N6 A B1189 50.543 99.765 133.556 1.00 47.27 N
ATOM 20 N1 A B1189 49.058 101.521 133.329 1.00 46.25 N
ATOM 21 C2 A B1189 48.804 102.823 133.456 1.00 44.90 C
ATOM 22 N3 A B1189 49.595 103.797 133.897 1.00 45.38 N
ATOM 23 C4 A B1189 50.792 103.310 134.244 1.00 44.50 C
ATOM 24 P A B1190 52.518 109.829 135.965 1.00 44.79 P
ATOM 25 OP1 A B1190 52.904 109.933 137.390 1.00 44.68 O
ATOM 26 OP2 A B1190 51.421 110.674 135.454 1.00 46.17 O
ATOM 27 O5' A B1190 53.821 110.120 135.092 1.00 44.54 O
TER
Atoms:
OP1: (48.153,95.381,131.705)
OP2: (49.316,97.512,132.561)
C3': (53.014,94.009,131.880)
C1': (54.309,95.847,131.197)
C5': (50.997,94.761,130.550)
O4': (53.141,95.808,130.397)
C8: (53.040,97.667,132.461)
O2': (55.248,93.656,130.988)
C6: (55.483,99.499,134.198)
C5: (54.626,98.666,133.463)
C4: (55.205,97.600,132.795)
P: (49.231,96.401,131.579)
C4': (52.476,94.533,130.564)
C2': (54.462,94.469,131.840)
C2: (57.209,98.123,133.523)
N1: (56.795,99.194,134.208)
N3: (56.505,97.268,132.789)
N6: (55.075,100.568,134.876)
N7: (53.256,98.693,133.251)
N9: (54.183,96.977,132.122)
O5': (50.645,95.679,131.585)
O3': (52.869,92.600,131.949)
OP2: (49.316,97.512,132.561)
C3': (53.014,94.009,131.880)
C1': (54.309,95.847,131.197)
C5': (50.997,94.761,130.550)
O4': (53.141,95.808,130.397)
C8: (53.040,97.667,132.461)
O2': (55.248,93.656,130.988)
C6: (55.483,99.499,134.198)
C5: (54.626,98.666,133.463)
C4: (55.205,97.600,132.795)
P: (49.231,96.401,131.579)
C4': (52.476,94.533,130.564)
C2': (54.462,94.469,131.840)
C2: (57.209,98.123,133.523)
N1: (56.795,99.194,134.208)
N3: (56.505,97.268,132.789)
N6: (55.075,100.568,134.876)
N7: (53.256,98.693,133.251)
N9: (54.183,96.977,132.122)
O5': (50.645,95.679,131.585)
O3': (52.869,92.600,131.949)
OP1: (55.992,103.027,135.736)
OP2: (57.458,104.824,136.847)
C3': (52.896,107.224,136.114)
C1': (52.025,105.454,134.809)
C5': (55.240,106.273,135.569)
O4': (53.278,105.795,134.251)
C8: (52.857,103.080,134.915)
O2': (50.715,106.230,136.653)
C6: (50.275,101.066,133.691)
C5: (51.194,101.992,134.182)
C4: (50.792,103.310,134.244)
P: (56.163,104.108,136.743)
C4': (53.920,106.809,135.063)
C2': (52.039,105.965,136.246)
C2: (48.804,102.823,133.456)
N1: (49.058,101.521,133.329)
N3: (49.595,103.797,133.897)
N6: (50.543,99.765,133.556)
N7: (52.498,101.857,134.623)
N9: (51.885,104.012,134.680)
O5': (55.025,105.196,136.498)
O3': (52.122,108.309,135.598)
OP2: (57.458,104.824,136.847)
C3': (52.896,107.224,136.114)
C1': (52.025,105.454,134.809)
C5': (55.240,106.273,135.569)
O4': (53.278,105.795,134.251)
C8: (52.857,103.080,134.915)
O2': (50.715,106.230,136.653)
C6: (50.275,101.066,133.691)
C5: (51.194,101.992,134.182)
C4: (50.792,103.310,134.244)
P: (56.163,104.108,136.743)
C4': (53.920,106.809,135.063)
C2': (52.039,105.965,136.246)
C2: (48.804,102.823,133.456)
N1: (49.058,101.521,133.329)
N3: (49.595,103.797,133.897)
N6: (50.543,99.765,133.556)
N7: (52.498,101.857,134.623)
N9: (51.885,104.012,134.680)
O5': (55.025,105.196,136.498)
O3': (52.122,108.309,135.598)
Image (generated by PyMOL):