Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2GDI:X43:X74
Extra
PDB:
ATOM 1 O3' U A 42 -32.494 -7.446 -17.121 1.00 47.44 O
ATOM 2 P A A 43 -32.324 -8.946 -17.656 1.00 48.63 P
ATOM 3 OP1 A A 43 -31.045 -9.043 -18.395 1.00 48.90 O
ATOM 4 OP2 A A 43 -33.585 -9.322 -18.333 1.00 48.97 O
ATOM 5 O5' A A 43 -32.219 -9.787 -16.297 1.00 49.35 O
ATOM 6 C5' A A 43 -31.283 -10.852 -16.172 1.00 49.88 C
ATOM 7 C4' A A 43 -30.710 -10.939 -14.766 1.00 50.60 C
ATOM 8 O4' A A 43 -30.285 -9.637 -14.301 1.00 50.03 O
ATOM 9 C3' A A 43 -31.656 -11.439 -13.677 1.00 51.55 C
ATOM 10 O3' A A 43 -31.429 -12.824 -13.436 1.00 54.33 O
ATOM 11 C2' A A 43 -31.303 -10.605 -12.441 1.00 50.48 C
ATOM 12 O2' A A 43 -30.924 -11.408 -11.338 1.00 50.79 O
ATOM 13 C1' A A 43 -30.115 -9.768 -12.907 1.00 48.84 C
ATOM 14 N9 A A 43 -30.013 -8.446 -12.291 1.00 47.32 N
ATOM 15 C8 A A 43 -28.857 -7.800 -11.947 1.00 46.84 C
ATOM 16 N7 A A 43 -29.046 -6.620 -11.406 1.00 45.98 N
ATOM 17 C5 A A 43 -30.423 -6.481 -11.392 1.00 46.02 C
ATOM 18 C6 A A 43 -31.263 -5.445 -10.939 1.00 45.87 C
ATOM 19 N6 A A 43 -30.805 -4.313 -10.395 1.00 45.80 N
ATOM 20 N1 A A 43 -32.595 -5.619 -11.068 1.00 45.90 N
ATOM 21 C2 A A 43 -33.046 -6.754 -11.616 1.00 45.83 C
ATOM 22 N3 A A 43 -32.355 -7.795 -12.076 1.00 45.90 N
ATOM 23 C4 A A 43 -31.036 -7.596 -11.934 1.00 46.20 C
ATOM 24 P U A 44 -32.525 -13.904 -13.873 1.00 56.29 P
ATOM 25 OP1 U A 44 -32.097 -14.477 -15.169 1.00 56.72 O
ATOM 26 OP2 U A 44 -33.859 -13.277 -13.746 1.00 56.54 O
ATOM 27 O5' U A 44 -32.404 -15.033 -12.745 1.00 57.94 O
TER
ATOM 1 O3' G B 73 -30.360 -0.822 -7.329 1.00 35.09 O
ATOM 2 P A B 74 -31.284 0.188 -8.147 1.00 37.09 P
ATOM 3 OP1 A B 74 -31.826 1.161 -7.172 1.00 36.20 O
ATOM 4 OP2 A B 74 -32.199 -0.597 -9.005 1.00 37.23 O
ATOM 5 O5' A B 74 -30.246 0.926 -9.114 1.00 35.29 O
ATOM 6 C5' A B 74 -29.361 1.909 -8.601 1.00 34.30 C
ATOM 7 C4' A B 74 -28.084 1.908 -9.417 1.00 33.81 C
ATOM 8 O4' A B 74 -27.250 0.804 -8.994 1.00 32.88 O
ATOM 9 C3' A B 74 -28.313 1.664 -10.897 1.00 33.62 C
ATOM 10 O3' A B 74 -28.546 2.905 -11.539 1.00 34.88 O
ATOM 11 C2' A B 74 -27.009 1.015 -11.351 1.00 33.05 C
ATOM 12 O2' A B 74 -26.038 1.970 -11.742 1.00 33.59 O
ATOM 13 C1' A B 74 -26.554 0.266 -10.100 1.00 31.71 C
ATOM 14 N9 A B 74 -26.797 -1.174 -10.128 1.00 30.60 N
ATOM 15 C8 A B 74 -28.006 -1.811 -10.083 1.00 29.84 C
ATOM 16 N7 A B 74 -27.918 -3.122 -10.111 1.00 29.10 N
ATOM 17 C5 A B 74 -26.557 -3.361 -10.173 1.00 28.93 C
ATOM 18 C6 A B 74 -25.809 -4.552 -10.234 1.00 28.79 C
ATOM 19 N6 A B 74 -26.365 -5.768 -10.233 1.00 28.90 N
ATOM 20 N1 A B 74 -24.465 -4.443 -10.286 1.00 28.89 N
ATOM 21 C2 A B 74 -23.915 -3.221 -10.286 1.00 28.92 C
ATOM 22 N3 A B 74 -24.515 -2.031 -10.236 1.00 29.13 N
ATOM 23 C4 A B 74 -25.850 -2.172 -10.182 1.00 29.64 C
ATOM 24 P A B 75 -29.349 2.922 -12.919 1.00 34.76 P
ATOM 25 OP1 A B 75 -29.349 4.310 -13.433 1.00 35.00 O
ATOM 26 OP2 A B 75 -30.628 2.204 -12.713 1.00 34.81 O
ATOM 27 O5' A B 75 -28.401 2.019 -13.838 1.00 34.83 O
TER
ATOM 2 P A A 43 -32.324 -8.946 -17.656 1.00 48.63 P
ATOM 3 OP1 A A 43 -31.045 -9.043 -18.395 1.00 48.90 O
ATOM 4 OP2 A A 43 -33.585 -9.322 -18.333 1.00 48.97 O
ATOM 5 O5' A A 43 -32.219 -9.787 -16.297 1.00 49.35 O
ATOM 6 C5' A A 43 -31.283 -10.852 -16.172 1.00 49.88 C
ATOM 7 C4' A A 43 -30.710 -10.939 -14.766 1.00 50.60 C
ATOM 8 O4' A A 43 -30.285 -9.637 -14.301 1.00 50.03 O
ATOM 9 C3' A A 43 -31.656 -11.439 -13.677 1.00 51.55 C
ATOM 10 O3' A A 43 -31.429 -12.824 -13.436 1.00 54.33 O
ATOM 11 C2' A A 43 -31.303 -10.605 -12.441 1.00 50.48 C
ATOM 12 O2' A A 43 -30.924 -11.408 -11.338 1.00 50.79 O
ATOM 13 C1' A A 43 -30.115 -9.768 -12.907 1.00 48.84 C
ATOM 14 N9 A A 43 -30.013 -8.446 -12.291 1.00 47.32 N
ATOM 15 C8 A A 43 -28.857 -7.800 -11.947 1.00 46.84 C
ATOM 16 N7 A A 43 -29.046 -6.620 -11.406 1.00 45.98 N
ATOM 17 C5 A A 43 -30.423 -6.481 -11.392 1.00 46.02 C
ATOM 18 C6 A A 43 -31.263 -5.445 -10.939 1.00 45.87 C
ATOM 19 N6 A A 43 -30.805 -4.313 -10.395 1.00 45.80 N
ATOM 20 N1 A A 43 -32.595 -5.619 -11.068 1.00 45.90 N
ATOM 21 C2 A A 43 -33.046 -6.754 -11.616 1.00 45.83 C
ATOM 22 N3 A A 43 -32.355 -7.795 -12.076 1.00 45.90 N
ATOM 23 C4 A A 43 -31.036 -7.596 -11.934 1.00 46.20 C
ATOM 24 P U A 44 -32.525 -13.904 -13.873 1.00 56.29 P
ATOM 25 OP1 U A 44 -32.097 -14.477 -15.169 1.00 56.72 O
ATOM 26 OP2 U A 44 -33.859 -13.277 -13.746 1.00 56.54 O
ATOM 27 O5' U A 44 -32.404 -15.033 -12.745 1.00 57.94 O
TER
ATOM 1 O3' G B 73 -30.360 -0.822 -7.329 1.00 35.09 O
ATOM 2 P A B 74 -31.284 0.188 -8.147 1.00 37.09 P
ATOM 3 OP1 A B 74 -31.826 1.161 -7.172 1.00 36.20 O
ATOM 4 OP2 A B 74 -32.199 -0.597 -9.005 1.00 37.23 O
ATOM 5 O5' A B 74 -30.246 0.926 -9.114 1.00 35.29 O
ATOM 6 C5' A B 74 -29.361 1.909 -8.601 1.00 34.30 C
ATOM 7 C4' A B 74 -28.084 1.908 -9.417 1.00 33.81 C
ATOM 8 O4' A B 74 -27.250 0.804 -8.994 1.00 32.88 O
ATOM 9 C3' A B 74 -28.313 1.664 -10.897 1.00 33.62 C
ATOM 10 O3' A B 74 -28.546 2.905 -11.539 1.00 34.88 O
ATOM 11 C2' A B 74 -27.009 1.015 -11.351 1.00 33.05 C
ATOM 12 O2' A B 74 -26.038 1.970 -11.742 1.00 33.59 O
ATOM 13 C1' A B 74 -26.554 0.266 -10.100 1.00 31.71 C
ATOM 14 N9 A B 74 -26.797 -1.174 -10.128 1.00 30.60 N
ATOM 15 C8 A B 74 -28.006 -1.811 -10.083 1.00 29.84 C
ATOM 16 N7 A B 74 -27.918 -3.122 -10.111 1.00 29.10 N
ATOM 17 C5 A B 74 -26.557 -3.361 -10.173 1.00 28.93 C
ATOM 18 C6 A B 74 -25.809 -4.552 -10.234 1.00 28.79 C
ATOM 19 N6 A B 74 -26.365 -5.768 -10.233 1.00 28.90 N
ATOM 20 N1 A B 74 -24.465 -4.443 -10.286 1.00 28.89 N
ATOM 21 C2 A B 74 -23.915 -3.221 -10.286 1.00 28.92 C
ATOM 22 N3 A B 74 -24.515 -2.031 -10.236 1.00 29.13 N
ATOM 23 C4 A B 74 -25.850 -2.172 -10.182 1.00 29.64 C
ATOM 24 P A B 75 -29.349 2.922 -12.919 1.00 34.76 P
ATOM 25 OP1 A B 75 -29.349 4.310 -13.433 1.00 35.00 O
ATOM 26 OP2 A B 75 -30.628 2.204 -12.713 1.00 34.81 O
ATOM 27 O5' A B 75 -28.401 2.019 -13.838 1.00 34.83 O
TER
Atoms:
OP1: (-31.045,-9.043,-18.395)
OP2: (-33.585,-9.322,-18.333)
C3': (-31.656,-11.439,-13.677)
C1': (-30.115,-9.768,-12.907)
C5': (-31.283,-10.852,-16.172)
O4': (-30.285,-9.637,-14.301)
C8: (-28.857,-7.800,-11.947)
O2': (-30.924,-11.408,-11.338)
C6: (-31.263,-5.445,-10.939)
C5: (-30.423,-6.481,-11.392)
C4: (-31.036,-7.596,-11.934)
P: (-32.324,-8.946,-17.656)
C4': (-30.710,-10.939,-14.766)
C2': (-31.303,-10.605,-12.441)
C2: (-33.046,-6.754,-11.616)
N1: (-32.595,-5.619,-11.068)
N3: (-32.355,-7.795,-12.076)
N6: (-30.805,-4.313,-10.395)
N7: (-29.046,-6.620,-11.406)
N9: (-30.013,-8.446,-12.291)
O5': (-32.219,-9.787,-16.297)
O3': (-31.429,-12.824,-13.436)
OP2: (-33.585,-9.322,-18.333)
C3': (-31.656,-11.439,-13.677)
C1': (-30.115,-9.768,-12.907)
C5': (-31.283,-10.852,-16.172)
O4': (-30.285,-9.637,-14.301)
C8: (-28.857,-7.800,-11.947)
O2': (-30.924,-11.408,-11.338)
C6: (-31.263,-5.445,-10.939)
C5: (-30.423,-6.481,-11.392)
C4: (-31.036,-7.596,-11.934)
P: (-32.324,-8.946,-17.656)
C4': (-30.710,-10.939,-14.766)
C2': (-31.303,-10.605,-12.441)
C2: (-33.046,-6.754,-11.616)
N1: (-32.595,-5.619,-11.068)
N3: (-32.355,-7.795,-12.076)
N6: (-30.805,-4.313,-10.395)
N7: (-29.046,-6.620,-11.406)
N9: (-30.013,-8.446,-12.291)
O5': (-32.219,-9.787,-16.297)
O3': (-31.429,-12.824,-13.436)
OP1: (-31.826,1.161,-7.172)
OP2: (-32.199,-0.597,-9.005)
C3': (-28.313,1.664,-10.897)
C1': (-26.554,0.266,-10.100)
C5': (-29.361,1.909,-8.601)
O4': (-27.250,0.804,-8.994)
C8: (-28.006,-1.811,-10.083)
O2': (-26.038,1.970,-11.742)
C6: (-25.809,-4.552,-10.234)
C5: (-26.557,-3.361,-10.173)
C4: (-25.850,-2.172,-10.182)
P: (-31.284,0.188,-8.147)
C4': (-28.084,1.908,-9.417)
C2': (-27.009,1.015,-11.351)
C2: (-23.915,-3.221,-10.286)
N1: (-24.465,-4.443,-10.286)
N3: (-24.515,-2.031,-10.236)
N6: (-26.365,-5.768,-10.233)
N7: (-27.918,-3.122,-10.111)
N9: (-26.797,-1.174,-10.128)
O5': (-30.246,0.926,-9.114)
O3': (-28.546,2.905,-11.539)
OP2: (-32.199,-0.597,-9.005)
C3': (-28.313,1.664,-10.897)
C1': (-26.554,0.266,-10.100)
C5': (-29.361,1.909,-8.601)
O4': (-27.250,0.804,-8.994)
C8: (-28.006,-1.811,-10.083)
O2': (-26.038,1.970,-11.742)
C6: (-25.809,-4.552,-10.234)
C5: (-26.557,-3.361,-10.173)
C4: (-25.850,-2.172,-10.182)
P: (-31.284,0.188,-8.147)
C4': (-28.084,1.908,-9.417)
C2': (-27.009,1.015,-11.351)
C2: (-23.915,-3.221,-10.286)
N1: (-24.465,-4.443,-10.286)
N3: (-24.515,-2.031,-10.236)
N6: (-26.365,-5.768,-10.233)
N7: (-27.918,-3.122,-10.111)
N9: (-26.797,-1.174,-10.128)
O5': (-30.246,0.926,-9.114)
O3': (-28.546,2.905,-11.539)
Image (generated by PyMOL):