Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A386:A417
Extra
PDB:
ATOM 1 O3' G A 385 65.674 -31.104 -88.905 1.00 62.49 O
ATOM 2 P A A 386 64.438 -30.075 -88.657 1.00 70.43 P
ATOM 3 OP1 A A 386 63.208 -30.765 -88.186 1.00 63.63 O
ATOM 4 OP2 A A 386 64.361 -29.173 -89.831 1.00 71.15 O
ATOM 5 O5' A A 386 64.945 -29.167 -87.456 1.00 57.02 O
ATOM 6 C5' A A 386 65.484 -29.767 -86.291 1.00 53.95 C
ATOM 7 C4' A A 386 65.688 -28.730 -85.222 1.00 54.98 C
ATOM 8 O4' A A 386 66.843 -27.921 -85.552 1.00 58.13 O
ATOM 9 C3' A A 386 64.522 -27.774 -85.009 1.00 56.98 C
ATOM 10 O3' A A 386 64.390 -27.508 -83.619 1.00 60.28 O
ATOM 11 C2' A A 386 64.959 -26.511 -85.757 1.00 62.08 C
ATOM 12 O2' A A 386 64.439 -25.316 -85.191 1.00 65.63 O
ATOM 13 C1' A A 386 66.477 -26.560 -85.596 1.00 57.05 C
ATOM 14 N9 A A 386 67.240 -25.921 -86.669 1.00 52.15 N
ATOM 15 C8 A A 386 67.851 -26.516 -87.743 1.00 58.33 C
ATOM 16 N7 A A 386 68.528 -25.687 -88.496 1.00 53.75 N
ATOM 17 C5 A A 386 68.339 -24.459 -87.888 1.00 58.50 C
ATOM 18 C6 A A 386 68.817 -23.174 -88.191 1.00 67.45 C
ATOM 19 N6 A A 386 69.622 -22.910 -89.225 1.00 69.59 N
ATOM 20 N1 A A 386 68.447 -22.156 -87.385 1.00 63.34 N
ATOM 21 C2 A A 386 67.645 -22.425 -86.343 1.00 65.67 C
ATOM 22 N3 A A 386 67.132 -23.594 -85.951 1.00 62.58 N
ATOM 23 C4 A A 386 67.528 -24.582 -86.774 1.00 56.65 C
ATOM 24 P G A 387 62.950 -27.196 -82.996 1.00 68.30 P
ATOM 25 OP1 G A 387 62.776 -28.217 -81.940 1.00 62.47 O
ATOM 26 OP2 G A 387 61.938 -27.067 -84.074 1.00 59.06 O
ATOM 27 O5' G A 387 63.136 -25.757 -82.333 1.00 64.47 O
TER
ATOM 1 O3' A B 416 73.034 -20.359 -91.370 1.00 74.64 O
ATOM 2 P A B 417 71.764 -20.538 -92.348 1.00 78.22 P
ATOM 3 OP1 A B 417 71.185 -19.193 -92.574 1.00 74.59 O
ATOM 4 OP2 A B 417 70.895 -21.606 -91.795 1.00 73.88 O
ATOM 5 O5' A B 417 72.358 -21.138 -93.707 1.00 70.97 O
ATOM 6 C5' A B 417 73.766 -21.257 -93.933 1.00 70.81 C
ATOM 7 C4' A B 417 74.136 -22.683 -94.324 1.00 72.23 C
ATOM 8 O4' A B 417 74.282 -23.516 -93.144 1.00 71.04 O
ATOM 9 C3' A B 417 73.194 -23.467 -95.232 1.00 72.96 C
ATOM 10 O3' A B 417 73.381 -23.183 -96.613 1.00 78.93 O
ATOM 11 C2' A B 417 73.587 -24.913 -94.954 1.00 71.09 C
ATOM 12 O2' A B 417 74.688 -25.308 -95.748 1.00 70.15 O
ATOM 13 C1' A B 417 73.980 -24.865 -93.473 1.00 70.99 C
ATOM 14 N9 A B 417 72.917 -25.352 -92.585 1.00 69.17 N
ATOM 15 C8 A B 417 72.106 -24.624 -91.752 1.00 70.54 C
ATOM 16 N7 A B 417 71.233 -25.348 -91.097 1.00 67.69 N
ATOM 17 C5 A B 417 71.487 -26.640 -91.522 1.00 61.78 C
ATOM 18 C6 A B 417 70.897 -27.868 -91.202 1.00 62.31 C
ATOM 19 N6 A B 417 69.885 -28.005 -90.345 1.00 60.94 N
ATOM 20 N1 A B 417 71.384 -28.970 -91.802 1.00 66.68 N
ATOM 21 C2 A B 417 72.395 -28.835 -92.664 1.00 68.62 C
ATOM 22 N3 A B 417 73.032 -27.737 -93.049 1.00 64.39 N
ATOM 23 C4 A B 417 72.524 -26.659 -92.434 1.00 63.30 C
ATOM 24 P U B 418 72.182 -23.447 -97.650 1.00 75.04 P
ATOM 25 OP1 U B 418 72.654 -22.938 -98.960 1.00 73.28 O
ATOM 26 OP2 U B 418 70.965 -22.860 -97.021 1.00 60.62 O
ATOM 27 O5' U B 418 72.053 -25.038 -97.728 1.00 63.84 O
TER
ATOM 2 P A A 386 64.438 -30.075 -88.657 1.00 70.43 P
ATOM 3 OP1 A A 386 63.208 -30.765 -88.186 1.00 63.63 O
ATOM 4 OP2 A A 386 64.361 -29.173 -89.831 1.00 71.15 O
ATOM 5 O5' A A 386 64.945 -29.167 -87.456 1.00 57.02 O
ATOM 6 C5' A A 386 65.484 -29.767 -86.291 1.00 53.95 C
ATOM 7 C4' A A 386 65.688 -28.730 -85.222 1.00 54.98 C
ATOM 8 O4' A A 386 66.843 -27.921 -85.552 1.00 58.13 O
ATOM 9 C3' A A 386 64.522 -27.774 -85.009 1.00 56.98 C
ATOM 10 O3' A A 386 64.390 -27.508 -83.619 1.00 60.28 O
ATOM 11 C2' A A 386 64.959 -26.511 -85.757 1.00 62.08 C
ATOM 12 O2' A A 386 64.439 -25.316 -85.191 1.00 65.63 O
ATOM 13 C1' A A 386 66.477 -26.560 -85.596 1.00 57.05 C
ATOM 14 N9 A A 386 67.240 -25.921 -86.669 1.00 52.15 N
ATOM 15 C8 A A 386 67.851 -26.516 -87.743 1.00 58.33 C
ATOM 16 N7 A A 386 68.528 -25.687 -88.496 1.00 53.75 N
ATOM 17 C5 A A 386 68.339 -24.459 -87.888 1.00 58.50 C
ATOM 18 C6 A A 386 68.817 -23.174 -88.191 1.00 67.45 C
ATOM 19 N6 A A 386 69.622 -22.910 -89.225 1.00 69.59 N
ATOM 20 N1 A A 386 68.447 -22.156 -87.385 1.00 63.34 N
ATOM 21 C2 A A 386 67.645 -22.425 -86.343 1.00 65.67 C
ATOM 22 N3 A A 386 67.132 -23.594 -85.951 1.00 62.58 N
ATOM 23 C4 A A 386 67.528 -24.582 -86.774 1.00 56.65 C
ATOM 24 P G A 387 62.950 -27.196 -82.996 1.00 68.30 P
ATOM 25 OP1 G A 387 62.776 -28.217 -81.940 1.00 62.47 O
ATOM 26 OP2 G A 387 61.938 -27.067 -84.074 1.00 59.06 O
ATOM 27 O5' G A 387 63.136 -25.757 -82.333 1.00 64.47 O
TER
ATOM 1 O3' A B 416 73.034 -20.359 -91.370 1.00 74.64 O
ATOM 2 P A B 417 71.764 -20.538 -92.348 1.00 78.22 P
ATOM 3 OP1 A B 417 71.185 -19.193 -92.574 1.00 74.59 O
ATOM 4 OP2 A B 417 70.895 -21.606 -91.795 1.00 73.88 O
ATOM 5 O5' A B 417 72.358 -21.138 -93.707 1.00 70.97 O
ATOM 6 C5' A B 417 73.766 -21.257 -93.933 1.00 70.81 C
ATOM 7 C4' A B 417 74.136 -22.683 -94.324 1.00 72.23 C
ATOM 8 O4' A B 417 74.282 -23.516 -93.144 1.00 71.04 O
ATOM 9 C3' A B 417 73.194 -23.467 -95.232 1.00 72.96 C
ATOM 10 O3' A B 417 73.381 -23.183 -96.613 1.00 78.93 O
ATOM 11 C2' A B 417 73.587 -24.913 -94.954 1.00 71.09 C
ATOM 12 O2' A B 417 74.688 -25.308 -95.748 1.00 70.15 O
ATOM 13 C1' A B 417 73.980 -24.865 -93.473 1.00 70.99 C
ATOM 14 N9 A B 417 72.917 -25.352 -92.585 1.00 69.17 N
ATOM 15 C8 A B 417 72.106 -24.624 -91.752 1.00 70.54 C
ATOM 16 N7 A B 417 71.233 -25.348 -91.097 1.00 67.69 N
ATOM 17 C5 A B 417 71.487 -26.640 -91.522 1.00 61.78 C
ATOM 18 C6 A B 417 70.897 -27.868 -91.202 1.00 62.31 C
ATOM 19 N6 A B 417 69.885 -28.005 -90.345 1.00 60.94 N
ATOM 20 N1 A B 417 71.384 -28.970 -91.802 1.00 66.68 N
ATOM 21 C2 A B 417 72.395 -28.835 -92.664 1.00 68.62 C
ATOM 22 N3 A B 417 73.032 -27.737 -93.049 1.00 64.39 N
ATOM 23 C4 A B 417 72.524 -26.659 -92.434 1.00 63.30 C
ATOM 24 P U B 418 72.182 -23.447 -97.650 1.00 75.04 P
ATOM 25 OP1 U B 418 72.654 -22.938 -98.960 1.00 73.28 O
ATOM 26 OP2 U B 418 70.965 -22.860 -97.021 1.00 60.62 O
ATOM 27 O5' U B 418 72.053 -25.038 -97.728 1.00 63.84 O
TER
Atoms:
OP1: (63.208,-30.765,-88.186)
OP2: (64.361,-29.173,-89.831)
C3': (64.522,-27.774,-85.009)
C1': (66.477,-26.560,-85.596)
C5': (65.484,-29.767,-86.291)
O4': (66.843,-27.921,-85.552)
C8: (67.851,-26.516,-87.743)
O2': (64.439,-25.316,-85.191)
C6: (68.817,-23.174,-88.191)
C5: (68.339,-24.459,-87.888)
C4: (67.528,-24.582,-86.774)
P: (64.438,-30.075,-88.657)
C4': (65.688,-28.730,-85.222)
C2': (64.959,-26.511,-85.757)
C2: (67.645,-22.425,-86.343)
N1: (68.447,-22.156,-87.385)
N3: (67.132,-23.594,-85.951)
N6: (69.622,-22.910,-89.225)
N7: (68.528,-25.687,-88.496)
N9: (67.240,-25.921,-86.669)
O5': (64.945,-29.167,-87.456)
O3': (64.390,-27.508,-83.619)
OP2: (64.361,-29.173,-89.831)
C3': (64.522,-27.774,-85.009)
C1': (66.477,-26.560,-85.596)
C5': (65.484,-29.767,-86.291)
O4': (66.843,-27.921,-85.552)
C8: (67.851,-26.516,-87.743)
O2': (64.439,-25.316,-85.191)
C6: (68.817,-23.174,-88.191)
C5: (68.339,-24.459,-87.888)
C4: (67.528,-24.582,-86.774)
P: (64.438,-30.075,-88.657)
C4': (65.688,-28.730,-85.222)
C2': (64.959,-26.511,-85.757)
C2: (67.645,-22.425,-86.343)
N1: (68.447,-22.156,-87.385)
N3: (67.132,-23.594,-85.951)
N6: (69.622,-22.910,-89.225)
N7: (68.528,-25.687,-88.496)
N9: (67.240,-25.921,-86.669)
O5': (64.945,-29.167,-87.456)
O3': (64.390,-27.508,-83.619)
OP1: (71.185,-19.193,-92.574)
OP2: (70.895,-21.606,-91.795)
C3': (73.194,-23.467,-95.232)
C1': (73.980,-24.865,-93.473)
C5': (73.766,-21.257,-93.933)
O4': (74.282,-23.516,-93.144)
C8: (72.106,-24.624,-91.752)
O2': (74.688,-25.308,-95.748)
C6: (70.897,-27.868,-91.202)
C5: (71.487,-26.640,-91.522)
C4: (72.524,-26.659,-92.434)
P: (71.764,-20.538,-92.348)
C4': (74.136,-22.683,-94.324)
C2': (73.587,-24.913,-94.954)
C2: (72.395,-28.835,-92.664)
N1: (71.384,-28.970,-91.802)
N3: (73.032,-27.737,-93.049)
N6: (69.885,-28.005,-90.345)
N7: (71.233,-25.348,-91.097)
N9: (72.917,-25.352,-92.585)
O5': (72.358,-21.138,-93.707)
O3': (73.381,-23.183,-96.613)
OP2: (70.895,-21.606,-91.795)
C3': (73.194,-23.467,-95.232)
C1': (73.980,-24.865,-93.473)
C5': (73.766,-21.257,-93.933)
O4': (74.282,-23.516,-93.144)
C8: (72.106,-24.624,-91.752)
O2': (74.688,-25.308,-95.748)
C6: (70.897,-27.868,-91.202)
C5: (71.487,-26.640,-91.522)
C4: (72.524,-26.659,-92.434)
P: (71.764,-20.538,-92.348)
C4': (74.136,-22.683,-94.324)
C2': (73.587,-24.913,-94.954)
C2: (72.395,-28.835,-92.664)
N1: (71.384,-28.970,-91.802)
N3: (73.032,-27.737,-93.049)
N6: (69.885,-28.005,-90.345)
N7: (71.233,-25.348,-91.097)
N9: (72.917,-25.352,-92.585)
O5': (72.358,-21.138,-93.707)
O3': (73.381,-23.183,-96.613)
Image (generated by PyMOL):