Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2301:A2304
Extra
PDB:
ATOM 1 O3' G A2300 -151.291 -23.291 7.250 1.00 65.92 O
ATOM 2 P G A2301 -151.372 -24.062 5.834 1.00 88.16 P
ATOM 3 OP1 G A2301 -152.667 -23.696 5.229 1.00 88.16 O
ATOM 4 OP2 G A2301 -151.092 -25.498 6.104 1.00 88.16 O
ATOM 5 O5' G A2301 -150.164 -23.415 4.989 1.00 88.16 O
ATOM 6 C5' G A2301 -149.446 -24.170 4.003 1.00 88.16 C
ATOM 7 C4' G A2301 -147.959 -23.834 3.995 1.00 88.16 C
ATOM 8 O4' G A2301 -147.653 -22.959 5.116 1.00 88.16 O
ATOM 9 C3' G A2301 -146.996 -25.032 4.132 1.00 88.16 C
ATOM 10 O3' G A2301 -146.556 -25.540 2.879 1.00 88.16 O
ATOM 11 C2' G A2301 -145.850 -24.499 4.991 1.00 88.16 C
ATOM 12 O2' G A2301 -144.857 -23.865 4.194 1.00 88.16 O
ATOM 13 C1' G A2301 -146.548 -23.446 5.844 1.00 88.16 C
ATOM 14 N9 G A2301 -147.058 -24.010 7.105 1.00 88.49 N
ATOM 15 C8 G A2301 -147.714 -25.211 7.274 1.00 88.49 C
ATOM 16 N7 G A2301 -148.075 -25.420 8.508 1.00 88.49 N
ATOM 17 C5 G A2301 -147.639 -24.281 9.179 1.00 88.49 C
ATOM 18 C6 G A2301 -147.737 -23.940 10.542 1.00 88.49 C
ATOM 19 O6 G A2301 -148.261 -24.610 11.451 1.00 88.49 O
ATOM 20 N1 G A2301 -147.154 -22.694 10.791 1.00 88.49 N
ATOM 21 C2 G A2301 -146.552 -21.880 9.862 1.00 88.49 C
ATOM 22 N2 G A2301 -146.051 -20.715 10.306 1.00 88.49 N
ATOM 23 N3 G A2301 -146.451 -22.191 8.585 1.00 88.49 N
ATOM 24 C4 G A2301 -147.008 -23.397 8.329 1.00 88.49 C
ATOM 25 P A A2302 -147.495 -26.507 2.004 1.00 99.00 P
ATOM 26 OP1 A A2302 -146.750 -26.834 0.760 1.00 99.00 O
ATOM 27 OP2 A A2302 -148.820 -25.842 1.887 1.00 99.00 O
ATOM 28 O5' A A2302 -147.610 -27.804 2.918 1.00 99.00 O
TER
ATOM 1 O3' C B2303 -148.434 -29.921 11.071 1.00 96.40 O
ATOM 2 P A B2304 -149.248 -28.525 11.106 1.00 74.75 P
ATOM 3 OP1 A B2304 -150.696 -28.862 11.118 1.00 74.75 O
ATOM 4 OP2 A B2304 -148.721 -27.679 10.005 1.00 74.75 O
ATOM 5 O5' A B2304 -148.837 -27.892 12.502 1.00 74.75 O
ATOM 6 C5' A B2304 -147.497 -27.933 12.976 1.00 74.75 C
ATOM 7 C4' A B2304 -147.443 -27.559 14.429 1.00 74.75 C
ATOM 8 O4' A B2304 -146.395 -26.582 14.629 1.00 74.75 O
ATOM 9 C3' A B2304 -148.728 -26.941 14.962 1.00 74.75 C
ATOM 10 O3' A B2304 -149.025 -27.467 16.256 1.00 74.75 O
ATOM 11 C2' A B2304 -148.427 -25.443 15.020 1.00 74.75 C
ATOM 12 O2' A B2304 -149.102 -24.745 16.044 1.00 74.75 O
ATOM 13 C1' A B2304 -146.913 -25.398 15.209 1.00 74.75 C
ATOM 14 N9 A B2304 -146.271 -24.252 14.537 1.00 75.38 N
ATOM 15 C8 A B2304 -145.809 -24.302 13.244 1.00 75.38 C
ATOM 16 N7 A B2304 -145.273 -23.189 12.796 1.00 75.38 N
ATOM 17 C5 A B2304 -145.380 -22.315 13.860 1.00 75.38 C
ATOM 18 C6 A B2304 -144.978 -20.968 13.971 1.00 75.38 C
ATOM 19 N6 A B2304 -144.381 -20.306 12.971 1.00 75.38 N
ATOM 20 N1 A B2304 -145.216 -20.345 15.152 1.00 75.38 N
ATOM 21 C2 A B2304 -145.815 -21.050 16.134 1.00 75.38 C
ATOM 22 N3 A B2304 -146.239 -22.326 16.142 1.00 75.38 N
ATOM 23 C4 A B2304 -145.993 -22.939 14.953 1.00 75.38 C
ATOM 24 P U B2305 -149.677 -28.945 16.373 1.00 44.63 P
ATOM 25 OP1 U B2305 -148.556 -29.929 16.237 1.00 44.63 O
ATOM 26 OP2 U B2305 -150.799 -29.001 15.395 1.00 44.63 O
ATOM 27 O5' U B2305 -150.264 -28.988 17.861 1.00 44.63 O
TER
ATOM 2 P G A2301 -151.372 -24.062 5.834 1.00 88.16 P
ATOM 3 OP1 G A2301 -152.667 -23.696 5.229 1.00 88.16 O
ATOM 4 OP2 G A2301 -151.092 -25.498 6.104 1.00 88.16 O
ATOM 5 O5' G A2301 -150.164 -23.415 4.989 1.00 88.16 O
ATOM 6 C5' G A2301 -149.446 -24.170 4.003 1.00 88.16 C
ATOM 7 C4' G A2301 -147.959 -23.834 3.995 1.00 88.16 C
ATOM 8 O4' G A2301 -147.653 -22.959 5.116 1.00 88.16 O
ATOM 9 C3' G A2301 -146.996 -25.032 4.132 1.00 88.16 C
ATOM 10 O3' G A2301 -146.556 -25.540 2.879 1.00 88.16 O
ATOM 11 C2' G A2301 -145.850 -24.499 4.991 1.00 88.16 C
ATOM 12 O2' G A2301 -144.857 -23.865 4.194 1.00 88.16 O
ATOM 13 C1' G A2301 -146.548 -23.446 5.844 1.00 88.16 C
ATOM 14 N9 G A2301 -147.058 -24.010 7.105 1.00 88.49 N
ATOM 15 C8 G A2301 -147.714 -25.211 7.274 1.00 88.49 C
ATOM 16 N7 G A2301 -148.075 -25.420 8.508 1.00 88.49 N
ATOM 17 C5 G A2301 -147.639 -24.281 9.179 1.00 88.49 C
ATOM 18 C6 G A2301 -147.737 -23.940 10.542 1.00 88.49 C
ATOM 19 O6 G A2301 -148.261 -24.610 11.451 1.00 88.49 O
ATOM 20 N1 G A2301 -147.154 -22.694 10.791 1.00 88.49 N
ATOM 21 C2 G A2301 -146.552 -21.880 9.862 1.00 88.49 C
ATOM 22 N2 G A2301 -146.051 -20.715 10.306 1.00 88.49 N
ATOM 23 N3 G A2301 -146.451 -22.191 8.585 1.00 88.49 N
ATOM 24 C4 G A2301 -147.008 -23.397 8.329 1.00 88.49 C
ATOM 25 P A A2302 -147.495 -26.507 2.004 1.00 99.00 P
ATOM 26 OP1 A A2302 -146.750 -26.834 0.760 1.00 99.00 O
ATOM 27 OP2 A A2302 -148.820 -25.842 1.887 1.00 99.00 O
ATOM 28 O5' A A2302 -147.610 -27.804 2.918 1.00 99.00 O
TER
ATOM 1 O3' C B2303 -148.434 -29.921 11.071 1.00 96.40 O
ATOM 2 P A B2304 -149.248 -28.525 11.106 1.00 74.75 P
ATOM 3 OP1 A B2304 -150.696 -28.862 11.118 1.00 74.75 O
ATOM 4 OP2 A B2304 -148.721 -27.679 10.005 1.00 74.75 O
ATOM 5 O5' A B2304 -148.837 -27.892 12.502 1.00 74.75 O
ATOM 6 C5' A B2304 -147.497 -27.933 12.976 1.00 74.75 C
ATOM 7 C4' A B2304 -147.443 -27.559 14.429 1.00 74.75 C
ATOM 8 O4' A B2304 -146.395 -26.582 14.629 1.00 74.75 O
ATOM 9 C3' A B2304 -148.728 -26.941 14.962 1.00 74.75 C
ATOM 10 O3' A B2304 -149.025 -27.467 16.256 1.00 74.75 O
ATOM 11 C2' A B2304 -148.427 -25.443 15.020 1.00 74.75 C
ATOM 12 O2' A B2304 -149.102 -24.745 16.044 1.00 74.75 O
ATOM 13 C1' A B2304 -146.913 -25.398 15.209 1.00 74.75 C
ATOM 14 N9 A B2304 -146.271 -24.252 14.537 1.00 75.38 N
ATOM 15 C8 A B2304 -145.809 -24.302 13.244 1.00 75.38 C
ATOM 16 N7 A B2304 -145.273 -23.189 12.796 1.00 75.38 N
ATOM 17 C5 A B2304 -145.380 -22.315 13.860 1.00 75.38 C
ATOM 18 C6 A B2304 -144.978 -20.968 13.971 1.00 75.38 C
ATOM 19 N6 A B2304 -144.381 -20.306 12.971 1.00 75.38 N
ATOM 20 N1 A B2304 -145.216 -20.345 15.152 1.00 75.38 N
ATOM 21 C2 A B2304 -145.815 -21.050 16.134 1.00 75.38 C
ATOM 22 N3 A B2304 -146.239 -22.326 16.142 1.00 75.38 N
ATOM 23 C4 A B2304 -145.993 -22.939 14.953 1.00 75.38 C
ATOM 24 P U B2305 -149.677 -28.945 16.373 1.00 44.63 P
ATOM 25 OP1 U B2305 -148.556 -29.929 16.237 1.00 44.63 O
ATOM 26 OP2 U B2305 -150.799 -29.001 15.395 1.00 44.63 O
ATOM 27 O5' U B2305 -150.264 -28.988 17.861 1.00 44.63 O
TER
Atoms:
OP1: (-152.667,-23.696,5.229)
OP2: (-151.092,-25.498,6.104)
C3': (-146.996,-25.032,4.132)
C1': (-146.548,-23.446,5.844)
C5': (-149.446,-24.170,4.003)
O6: (-148.261,-24.610,11.451)
O4': (-147.653,-22.959,5.116)
C8: (-147.714,-25.211,7.274)
C2: (-146.552,-21.880,9.862)
C6: (-147.737,-23.940,10.542)
C5: (-147.639,-24.281,9.179)
C4: (-147.008,-23.397,8.329)
P: (-151.372,-24.062,5.834)
C4': (-147.959,-23.834,3.995)
C2': (-145.850,-24.499,4.991)
O2': (-144.857,-23.865,4.194)
N1: (-147.154,-22.694,10.791)
N2: (-146.051,-20.715,10.306)
N3: (-146.451,-22.191,8.585)
N7: (-148.075,-25.420,8.508)
N9: (-147.058,-24.010,7.105)
O5': (-150.164,-23.415,4.989)
O3': (-146.556,-25.540,2.879)
OP2: (-151.092,-25.498,6.104)
C3': (-146.996,-25.032,4.132)
C1': (-146.548,-23.446,5.844)
C5': (-149.446,-24.170,4.003)
O6: (-148.261,-24.610,11.451)
O4': (-147.653,-22.959,5.116)
C8: (-147.714,-25.211,7.274)
C2: (-146.552,-21.880,9.862)
C6: (-147.737,-23.940,10.542)
C5: (-147.639,-24.281,9.179)
C4: (-147.008,-23.397,8.329)
P: (-151.372,-24.062,5.834)
C4': (-147.959,-23.834,3.995)
C2': (-145.850,-24.499,4.991)
O2': (-144.857,-23.865,4.194)
N1: (-147.154,-22.694,10.791)
N2: (-146.051,-20.715,10.306)
N3: (-146.451,-22.191,8.585)
N7: (-148.075,-25.420,8.508)
N9: (-147.058,-24.010,7.105)
O5': (-150.164,-23.415,4.989)
O3': (-146.556,-25.540,2.879)
OP1: (-150.696,-28.862,11.118)
OP2: (-148.721,-27.679,10.005)
C3': (-148.728,-26.941,14.962)
C1': (-146.913,-25.398,15.209)
C5': (-147.497,-27.933,12.976)
O4': (-146.395,-26.582,14.629)
C8: (-145.809,-24.302,13.244)
O2': (-149.102,-24.745,16.044)
C6: (-144.978,-20.968,13.971)
C5: (-145.380,-22.315,13.860)
C4: (-145.993,-22.939,14.953)
P: (-149.248,-28.525,11.106)
C4': (-147.443,-27.559,14.429)
C2': (-148.427,-25.443,15.020)
C2: (-145.815,-21.050,16.134)
N1: (-145.216,-20.345,15.152)
N3: (-146.239,-22.326,16.142)
N6: (-144.381,-20.306,12.971)
N7: (-145.273,-23.189,12.796)
N9: (-146.271,-24.252,14.537)
O5': (-148.837,-27.892,12.502)
O3': (-149.025,-27.467,16.256)
OP2: (-148.721,-27.679,10.005)
C3': (-148.728,-26.941,14.962)
C1': (-146.913,-25.398,15.209)
C5': (-147.497,-27.933,12.976)
O4': (-146.395,-26.582,14.629)
C8: (-145.809,-24.302,13.244)
O2': (-149.102,-24.745,16.044)
C6: (-144.978,-20.968,13.971)
C5: (-145.380,-22.315,13.860)
C4: (-145.993,-22.939,14.953)
P: (-149.248,-28.525,11.106)
C4': (-147.443,-27.559,14.429)
C2': (-148.427,-25.443,15.020)
C2: (-145.815,-21.050,16.134)
N1: (-145.216,-20.345,15.152)
N3: (-146.239,-22.326,16.142)
N6: (-144.381,-20.306,12.971)
N7: (-145.273,-23.189,12.796)
N9: (-146.271,-24.252,14.537)
O5': (-148.837,-27.892,12.502)
O3': (-149.025,-27.467,16.256)
Image (generated by PyMOL):