Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:01725:01734
Extra
PDB:
ATOM 1 O3' U A1724 116.459 155.077 114.530 1.00 53.78 O
ATOM 2 P A A1725 117.502 154.205 113.675 1.00 54.70 P
ATOM 3 OP1 A A1725 118.867 154.593 114.114 1.00 55.41 O
ATOM 4 OP2 A A1725 117.145 154.298 112.240 1.00 56.01 O
ATOM 5 O5' A A1725 117.220 152.714 114.156 1.00 51.92 O
ATOM 6 C5' A A1725 117.282 152.368 115.547 1.00 51.14 C
ATOM 7 C4' A A1725 116.434 151.152 115.824 1.00 50.73 C
ATOM 8 O4' A A1725 115.040 151.460 115.562 1.00 50.66 O
ATOM 9 C3' A A1725 116.723 149.950 114.946 1.00 50.37 C
ATOM 10 O3' A A1725 117.841 149.213 115.419 1.00 50.31 O
ATOM 11 C2' A A1725 115.411 149.181 115.010 1.00 50.64 C
ATOM 12 O2' A A1725 115.250 148.442 116.203 1.00 48.63 O
ATOM 13 C1' A A1725 114.399 150.330 114.991 1.00 51.14 C
ATOM 14 N9 A A1725 113.971 150.692 113.639 1.00 50.90 N
ATOM 15 C8 A A1725 114.420 151.739 112.872 1.00 50.96 C
ATOM 16 N7 A A1725 113.848 151.818 111.696 1.00 51.77 N
ATOM 17 C5 A A1725 112.962 150.751 111.684 1.00 52.02 C
ATOM 18 C6 A A1725 112.054 150.285 110.713 1.00 52.08 C
ATOM 19 N6 A A1725 111.884 150.858 109.520 1.00 52.30 N
ATOM 20 N1 A A1725 111.322 149.193 111.013 1.00 52.01 N
ATOM 21 C2 A A1725 111.500 148.612 112.208 1.00 51.92 C
ATOM 22 N3 A A1725 112.319 148.954 113.200 1.00 51.19 N
ATOM 23 C4 A A1725 113.030 150.046 112.873 1.00 51.31 C
ATOM 24 P C A1726 118.776 148.433 114.374 1.00 50.93 P
ATOM 25 OP1 C A1726 119.999 147.999 115.088 1.00 50.70 O
ATOM 26 OP2 C A1726 118.899 149.261 113.148 1.00 50.42 O
ATOM 27 O5' C A1726 117.930 147.133 114.024 1.00 51.10 O
TER
ATOM 1 O3' A B1733 109.686 150.277 105.281 1.00 43.78 O
ATOM 2 P A B1734 108.893 151.300 106.229 1.00 44.60 P
ATOM 3 OP1 A B1734 109.484 151.230 107.586 1.00 45.71 O
ATOM 4 OP2 A B1734 107.446 151.020 106.046 1.00 46.53 O
ATOM 5 O5' A B1734 109.230 152.727 105.614 1.00 45.13 O
ATOM 6 C5' A B1734 108.358 153.855 105.821 1.00 48.00 C
ATOM 7 C4' A B1734 109.069 155.138 105.447 1.00 50.09 C
ATOM 8 O4' A B1734 110.001 155.502 106.497 1.00 51.93 O
ATOM 9 C3' A B1734 109.881 155.078 104.158 1.00 50.11 C
ATOM 10 O3' A B1734 109.884 156.358 103.535 1.00 48.07 O
ATOM 11 C2' A B1734 111.268 154.701 104.677 1.00 51.97 C
ATOM 12 O2' A B1734 112.328 155.084 103.830 1.00 53.93 O
ATOM 13 C1' A B1734 111.325 155.469 105.998 1.00 54.09 C
ATOM 14 N9 A B1734 112.168 154.841 107.020 1.00 56.67 N
ATOM 15 C8 A B1734 112.045 153.572 107.540 1.00 57.28 C
ATOM 16 N7 A B1734 112.923 153.294 108.471 1.00 58.08 N
ATOM 17 C5 A B1734 113.683 154.451 108.569 1.00 57.70 C
ATOM 18 C6 A B1734 114.779 154.794 109.381 1.00 57.27 C
ATOM 19 N6 A B1734 115.322 153.970 110.274 1.00 57.17 N
ATOM 20 N1 A B1734 115.304 156.026 109.237 1.00 57.22 N
ATOM 21 C2 A B1734 114.763 156.849 108.330 1.00 57.60 C
ATOM 22 N3 A B1734 113.739 156.643 107.505 1.00 56.87 N
ATOM 23 C4 A B1734 113.235 155.410 107.677 1.00 57.15 C
ATOM 24 P G B1735 108.610 156.838 102.673 1.00 46.22 P
ATOM 25 OP1 G B1735 107.593 155.763 102.607 1.00 46.30 O
ATOM 26 OP2 G B1735 109.124 157.439 101.419 1.00 46.21 O
ATOM 27 O5' G B1735 108.007 158.025 103.538 1.00 45.49 O
TER
ATOM 2 P A A1725 117.502 154.205 113.675 1.00 54.70 P
ATOM 3 OP1 A A1725 118.867 154.593 114.114 1.00 55.41 O
ATOM 4 OP2 A A1725 117.145 154.298 112.240 1.00 56.01 O
ATOM 5 O5' A A1725 117.220 152.714 114.156 1.00 51.92 O
ATOM 6 C5' A A1725 117.282 152.368 115.547 1.00 51.14 C
ATOM 7 C4' A A1725 116.434 151.152 115.824 1.00 50.73 C
ATOM 8 O4' A A1725 115.040 151.460 115.562 1.00 50.66 O
ATOM 9 C3' A A1725 116.723 149.950 114.946 1.00 50.37 C
ATOM 10 O3' A A1725 117.841 149.213 115.419 1.00 50.31 O
ATOM 11 C2' A A1725 115.411 149.181 115.010 1.00 50.64 C
ATOM 12 O2' A A1725 115.250 148.442 116.203 1.00 48.63 O
ATOM 13 C1' A A1725 114.399 150.330 114.991 1.00 51.14 C
ATOM 14 N9 A A1725 113.971 150.692 113.639 1.00 50.90 N
ATOM 15 C8 A A1725 114.420 151.739 112.872 1.00 50.96 C
ATOM 16 N7 A A1725 113.848 151.818 111.696 1.00 51.77 N
ATOM 17 C5 A A1725 112.962 150.751 111.684 1.00 52.02 C
ATOM 18 C6 A A1725 112.054 150.285 110.713 1.00 52.08 C
ATOM 19 N6 A A1725 111.884 150.858 109.520 1.00 52.30 N
ATOM 20 N1 A A1725 111.322 149.193 111.013 1.00 52.01 N
ATOM 21 C2 A A1725 111.500 148.612 112.208 1.00 51.92 C
ATOM 22 N3 A A1725 112.319 148.954 113.200 1.00 51.19 N
ATOM 23 C4 A A1725 113.030 150.046 112.873 1.00 51.31 C
ATOM 24 P C A1726 118.776 148.433 114.374 1.00 50.93 P
ATOM 25 OP1 C A1726 119.999 147.999 115.088 1.00 50.70 O
ATOM 26 OP2 C A1726 118.899 149.261 113.148 1.00 50.42 O
ATOM 27 O5' C A1726 117.930 147.133 114.024 1.00 51.10 O
TER
ATOM 1 O3' A B1733 109.686 150.277 105.281 1.00 43.78 O
ATOM 2 P A B1734 108.893 151.300 106.229 1.00 44.60 P
ATOM 3 OP1 A B1734 109.484 151.230 107.586 1.00 45.71 O
ATOM 4 OP2 A B1734 107.446 151.020 106.046 1.00 46.53 O
ATOM 5 O5' A B1734 109.230 152.727 105.614 1.00 45.13 O
ATOM 6 C5' A B1734 108.358 153.855 105.821 1.00 48.00 C
ATOM 7 C4' A B1734 109.069 155.138 105.447 1.00 50.09 C
ATOM 8 O4' A B1734 110.001 155.502 106.497 1.00 51.93 O
ATOM 9 C3' A B1734 109.881 155.078 104.158 1.00 50.11 C
ATOM 10 O3' A B1734 109.884 156.358 103.535 1.00 48.07 O
ATOM 11 C2' A B1734 111.268 154.701 104.677 1.00 51.97 C
ATOM 12 O2' A B1734 112.328 155.084 103.830 1.00 53.93 O
ATOM 13 C1' A B1734 111.325 155.469 105.998 1.00 54.09 C
ATOM 14 N9 A B1734 112.168 154.841 107.020 1.00 56.67 N
ATOM 15 C8 A B1734 112.045 153.572 107.540 1.00 57.28 C
ATOM 16 N7 A B1734 112.923 153.294 108.471 1.00 58.08 N
ATOM 17 C5 A B1734 113.683 154.451 108.569 1.00 57.70 C
ATOM 18 C6 A B1734 114.779 154.794 109.381 1.00 57.27 C
ATOM 19 N6 A B1734 115.322 153.970 110.274 1.00 57.17 N
ATOM 20 N1 A B1734 115.304 156.026 109.237 1.00 57.22 N
ATOM 21 C2 A B1734 114.763 156.849 108.330 1.00 57.60 C
ATOM 22 N3 A B1734 113.739 156.643 107.505 1.00 56.87 N
ATOM 23 C4 A B1734 113.235 155.410 107.677 1.00 57.15 C
ATOM 24 P G B1735 108.610 156.838 102.673 1.00 46.22 P
ATOM 25 OP1 G B1735 107.593 155.763 102.607 1.00 46.30 O
ATOM 26 OP2 G B1735 109.124 157.439 101.419 1.00 46.21 O
ATOM 27 O5' G B1735 108.007 158.025 103.538 1.00 45.49 O
TER
Atoms:
OP1: (118.867,154.593,114.114)
OP2: (117.145,154.298,112.240)
C3': (116.723,149.950,114.946)
C1': (114.399,150.330,114.991)
C5': (117.282,152.368,115.547)
O4': (115.040,151.460,115.562)
C8: (114.420,151.739,112.872)
O2': (115.250,148.442,116.203)
C6: (112.054,150.285,110.713)
C5: (112.962,150.751,111.684)
C4: (113.030,150.046,112.873)
P: (117.502,154.205,113.675)
C4': (116.434,151.152,115.824)
C2': (115.411,149.181,115.010)
C2: (111.500,148.612,112.208)
N1: (111.322,149.193,111.013)
N3: (112.319,148.954,113.200)
N6: (111.884,150.858,109.520)
N7: (113.848,151.818,111.696)
N9: (113.971,150.692,113.639)
O5': (117.220,152.714,114.156)
O3': (117.841,149.213,115.419)
OP2: (117.145,154.298,112.240)
C3': (116.723,149.950,114.946)
C1': (114.399,150.330,114.991)
C5': (117.282,152.368,115.547)
O4': (115.040,151.460,115.562)
C8: (114.420,151.739,112.872)
O2': (115.250,148.442,116.203)
C6: (112.054,150.285,110.713)
C5: (112.962,150.751,111.684)
C4: (113.030,150.046,112.873)
P: (117.502,154.205,113.675)
C4': (116.434,151.152,115.824)
C2': (115.411,149.181,115.010)
C2: (111.500,148.612,112.208)
N1: (111.322,149.193,111.013)
N3: (112.319,148.954,113.200)
N6: (111.884,150.858,109.520)
N7: (113.848,151.818,111.696)
N9: (113.971,150.692,113.639)
O5': (117.220,152.714,114.156)
O3': (117.841,149.213,115.419)
OP1: (109.484,151.230,107.586)
OP2: (107.446,151.020,106.046)
C3': (109.881,155.078,104.158)
C1': (111.325,155.469,105.998)
C5': (108.358,153.855,105.821)
O4': (110.001,155.502,106.497)
C8: (112.045,153.572,107.540)
O2': (112.328,155.084,103.830)
C6: (114.779,154.794,109.381)
C5: (113.683,154.451,108.569)
C4: (113.235,155.410,107.677)
P: (108.893,151.300,106.229)
C4': (109.069,155.138,105.447)
C2': (111.268,154.701,104.677)
C2: (114.763,156.849,108.330)
N1: (115.304,156.026,109.237)
N3: (113.739,156.643,107.505)
N6: (115.322,153.970,110.274)
N7: (112.923,153.294,108.471)
N9: (112.168,154.841,107.020)
O5': (109.230,152.727,105.614)
O3': (109.884,156.358,103.535)
OP2: (107.446,151.020,106.046)
C3': (109.881,155.078,104.158)
C1': (111.325,155.469,105.998)
C5': (108.358,153.855,105.821)
O4': (110.001,155.502,106.497)
C8: (112.045,153.572,107.540)
O2': (112.328,155.084,103.830)
C6: (114.779,154.794,109.381)
C5: (113.683,154.451,108.569)
C4: (113.235,155.410,107.677)
P: (108.893,151.300,106.229)
C4': (109.069,155.138,105.447)
C2': (111.268,154.701,104.677)
C2: (114.763,156.849,108.330)
N1: (115.304,156.026,109.237)
N3: (113.739,156.643,107.505)
N6: (115.322,153.970,110.274)
N7: (112.923,153.294,108.471)
N9: (112.168,154.841,107.020)
O5': (109.230,152.727,105.614)
O3': (109.884,156.358,103.535)
Image (generated by PyMOL):