Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2VQF:A1322:A1352
Extra
PDB:
ATOM 1 O3' U A1321 221.555 140.658 -14.562 1.00 77.53 O
ATOM 2 P A A1322 221.447 141.741 -13.384 1.00 76.46 P
ATOM 3 OP1 A A1322 220.821 141.080 -12.203 1.00 76.77 O
ATOM 4 OP2 A A1322 220.818 142.925 -13.999 1.00 74.97 O
ATOM 5 O5' A A1322 222.975 142.073 -13.045 1.00 78.09 O
ATOM 6 C5' A A1322 223.459 142.152 -11.685 1.00 79.94 C
ATOM 7 C4' A A1322 224.681 143.042 -11.627 1.00 81.96 C
ATOM 8 O4' A A1322 225.751 142.434 -12.399 1.00 81.99 O
ATOM 9 C3' A A1322 224.476 144.441 -12.224 1.00 83.61 C
ATOM 10 O3' A A1322 225.363 145.370 -11.563 1.00 85.80 O
ATOM 11 C2' A A1322 225.030 144.269 -13.634 1.00 83.20 C
ATOM 12 O2' A A1322 225.418 145.476 -14.256 1.00 82.83 O
ATOM 13 C1' A A1322 226.229 143.385 -13.318 1.00 84.21 C
ATOM 14 N9 A A1322 226.926 142.735 -14.421 1.00 86.96 N
ATOM 15 C8 A A1322 226.746 141.501 -14.982 1.00 88.02 C
ATOM 16 N7 A A1322 227.576 141.245 -15.965 1.00 90.15 N
ATOM 17 C5 A A1322 228.351 142.393 -16.056 1.00 89.90 C
ATOM 18 C6 A A1322 229.410 142.763 -16.904 1.00 90.17 C
ATOM 19 N6 A A1322 229.906 141.979 -17.861 1.00 91.79 N
ATOM 20 N1 A A1322 229.955 143.982 -16.730 1.00 89.61 N
ATOM 21 C2 A A1322 229.475 144.763 -15.768 1.00 88.88 C
ATOM 22 N3 A A1322 228.493 144.531 -14.910 1.00 89.29 N
ATOM 23 C4 A A1322 227.964 143.315 -15.110 1.00 88.55 C
ATOM 24 P G A1323 224.790 146.509 -10.585 1.00 86.40 P
ATOM 25 OP1 G A1323 223.436 146.925 -11.062 1.00 84.32 O
ATOM 26 OP2 G A1323 225.856 147.520 -10.491 1.00 86.46 O
ATOM 27 O5' G A1323 224.666 145.742 -9.166 1.00 88.45 O
TER
ATOM 1 O3' A B1351 233.675 142.312 -20.065 1.00 75.06 O
ATOM 2 P A B1352 232.547 142.492 -21.198 1.00 75.03 P
ATOM 3 OP1 A B1352 233.165 143.129 -22.405 1.00 74.50 O
ATOM 4 OP2 A B1352 231.379 143.139 -20.564 1.00 74.98 O
ATOM 5 O5' A B1352 232.185 141.004 -21.592 1.00 74.41 O
ATOM 6 C5' A B1352 233.196 140.112 -22.087 1.00 74.11 C
ATOM 7 C4' A B1352 232.624 138.731 -22.290 1.00 74.90 C
ATOM 8 O4' A B1352 232.318 138.124 -21.009 1.00 74.60 O
ATOM 9 C3' A B1352 231.318 138.687 -23.063 1.00 75.09 C
ATOM 10 O3' A B1352 231.516 138.711 -24.450 1.00 76.14 O
ATOM 11 C2' A B1352 230.696 137.386 -22.586 1.00 75.95 C
ATOM 12 O2' A B1352 231.231 136.263 -23.261 1.00 76.02 O
ATOM 13 C1' A B1352 231.121 137.368 -21.115 1.00 76.26 C
ATOM 14 N9 A B1352 230.116 137.973 -20.229 1.00 77.39 N
ATOM 15 C8 A B1352 230.172 139.219 -19.660 1.00 77.93 C
ATOM 16 N7 A B1352 229.141 139.502 -18.905 1.00 78.92 N
ATOM 17 C5 A B1352 228.348 138.371 -18.978 1.00 76.73 C
ATOM 18 C6 A B1352 227.125 138.052 -18.392 1.00 76.09 C
ATOM 19 N6 A B1352 226.455 138.877 -17.599 1.00 75.22 N
ATOM 20 N1 A B1352 226.599 136.842 -18.654 1.00 77.13 N
ATOM 21 C2 A B1352 227.267 136.019 -19.463 1.00 76.88 C
ATOM 22 N3 A B1352 228.424 136.208 -20.083 1.00 78.20 N
ATOM 23 C4 A B1352 228.927 137.421 -19.793 1.00 77.47 C
ATOM 24 P U B1353 230.536 139.591 -25.369 1.00 78.21 P
ATOM 25 OP1 U B1353 231.003 139.485 -26.787 1.00 78.75 O
ATOM 26 OP2 U B1353 230.387 140.925 -24.740 1.00 79.04 O
ATOM 27 O5' U B1353 229.164 138.820 -25.261 1.00 79.33 O
TER
ATOM 2 P A A1322 221.447 141.741 -13.384 1.00 76.46 P
ATOM 3 OP1 A A1322 220.821 141.080 -12.203 1.00 76.77 O
ATOM 4 OP2 A A1322 220.818 142.925 -13.999 1.00 74.97 O
ATOM 5 O5' A A1322 222.975 142.073 -13.045 1.00 78.09 O
ATOM 6 C5' A A1322 223.459 142.152 -11.685 1.00 79.94 C
ATOM 7 C4' A A1322 224.681 143.042 -11.627 1.00 81.96 C
ATOM 8 O4' A A1322 225.751 142.434 -12.399 1.00 81.99 O
ATOM 9 C3' A A1322 224.476 144.441 -12.224 1.00 83.61 C
ATOM 10 O3' A A1322 225.363 145.370 -11.563 1.00 85.80 O
ATOM 11 C2' A A1322 225.030 144.269 -13.634 1.00 83.20 C
ATOM 12 O2' A A1322 225.418 145.476 -14.256 1.00 82.83 O
ATOM 13 C1' A A1322 226.229 143.385 -13.318 1.00 84.21 C
ATOM 14 N9 A A1322 226.926 142.735 -14.421 1.00 86.96 N
ATOM 15 C8 A A1322 226.746 141.501 -14.982 1.00 88.02 C
ATOM 16 N7 A A1322 227.576 141.245 -15.965 1.00 90.15 N
ATOM 17 C5 A A1322 228.351 142.393 -16.056 1.00 89.90 C
ATOM 18 C6 A A1322 229.410 142.763 -16.904 1.00 90.17 C
ATOM 19 N6 A A1322 229.906 141.979 -17.861 1.00 91.79 N
ATOM 20 N1 A A1322 229.955 143.982 -16.730 1.00 89.61 N
ATOM 21 C2 A A1322 229.475 144.763 -15.768 1.00 88.88 C
ATOM 22 N3 A A1322 228.493 144.531 -14.910 1.00 89.29 N
ATOM 23 C4 A A1322 227.964 143.315 -15.110 1.00 88.55 C
ATOM 24 P G A1323 224.790 146.509 -10.585 1.00 86.40 P
ATOM 25 OP1 G A1323 223.436 146.925 -11.062 1.00 84.32 O
ATOM 26 OP2 G A1323 225.856 147.520 -10.491 1.00 86.46 O
ATOM 27 O5' G A1323 224.666 145.742 -9.166 1.00 88.45 O
TER
ATOM 1 O3' A B1351 233.675 142.312 -20.065 1.00 75.06 O
ATOM 2 P A B1352 232.547 142.492 -21.198 1.00 75.03 P
ATOM 3 OP1 A B1352 233.165 143.129 -22.405 1.00 74.50 O
ATOM 4 OP2 A B1352 231.379 143.139 -20.564 1.00 74.98 O
ATOM 5 O5' A B1352 232.185 141.004 -21.592 1.00 74.41 O
ATOM 6 C5' A B1352 233.196 140.112 -22.087 1.00 74.11 C
ATOM 7 C4' A B1352 232.624 138.731 -22.290 1.00 74.90 C
ATOM 8 O4' A B1352 232.318 138.124 -21.009 1.00 74.60 O
ATOM 9 C3' A B1352 231.318 138.687 -23.063 1.00 75.09 C
ATOM 10 O3' A B1352 231.516 138.711 -24.450 1.00 76.14 O
ATOM 11 C2' A B1352 230.696 137.386 -22.586 1.00 75.95 C
ATOM 12 O2' A B1352 231.231 136.263 -23.261 1.00 76.02 O
ATOM 13 C1' A B1352 231.121 137.368 -21.115 1.00 76.26 C
ATOM 14 N9 A B1352 230.116 137.973 -20.229 1.00 77.39 N
ATOM 15 C8 A B1352 230.172 139.219 -19.660 1.00 77.93 C
ATOM 16 N7 A B1352 229.141 139.502 -18.905 1.00 78.92 N
ATOM 17 C5 A B1352 228.348 138.371 -18.978 1.00 76.73 C
ATOM 18 C6 A B1352 227.125 138.052 -18.392 1.00 76.09 C
ATOM 19 N6 A B1352 226.455 138.877 -17.599 1.00 75.22 N
ATOM 20 N1 A B1352 226.599 136.842 -18.654 1.00 77.13 N
ATOM 21 C2 A B1352 227.267 136.019 -19.463 1.00 76.88 C
ATOM 22 N3 A B1352 228.424 136.208 -20.083 1.00 78.20 N
ATOM 23 C4 A B1352 228.927 137.421 -19.793 1.00 77.47 C
ATOM 24 P U B1353 230.536 139.591 -25.369 1.00 78.21 P
ATOM 25 OP1 U B1353 231.003 139.485 -26.787 1.00 78.75 O
ATOM 26 OP2 U B1353 230.387 140.925 -24.740 1.00 79.04 O
ATOM 27 O5' U B1353 229.164 138.820 -25.261 1.00 79.33 O
TER
Atoms:
OP1: (220.821,141.080,-12.203)
OP2: (220.818,142.925,-13.999)
C3': (224.476,144.441,-12.224)
C1': (226.229,143.385,-13.318)
C5': (223.459,142.152,-11.685)
O4': (225.751,142.434,-12.399)
C8: (226.746,141.501,-14.982)
O2': (225.418,145.476,-14.256)
C6: (229.410,142.763,-16.904)
C5: (228.351,142.393,-16.056)
C4: (227.964,143.315,-15.110)
P: (221.447,141.741,-13.384)
C4': (224.681,143.042,-11.627)
C2': (225.030,144.269,-13.634)
C2: (229.475,144.763,-15.768)
N1: (229.955,143.982,-16.730)
N3: (228.493,144.531,-14.910)
N6: (229.906,141.979,-17.861)
N7: (227.576,141.245,-15.965)
N9: (226.926,142.735,-14.421)
O5': (222.975,142.073,-13.045)
O3': (225.363,145.370,-11.563)
OP2: (220.818,142.925,-13.999)
C3': (224.476,144.441,-12.224)
C1': (226.229,143.385,-13.318)
C5': (223.459,142.152,-11.685)
O4': (225.751,142.434,-12.399)
C8: (226.746,141.501,-14.982)
O2': (225.418,145.476,-14.256)
C6: (229.410,142.763,-16.904)
C5: (228.351,142.393,-16.056)
C4: (227.964,143.315,-15.110)
P: (221.447,141.741,-13.384)
C4': (224.681,143.042,-11.627)
C2': (225.030,144.269,-13.634)
C2: (229.475,144.763,-15.768)
N1: (229.955,143.982,-16.730)
N3: (228.493,144.531,-14.910)
N6: (229.906,141.979,-17.861)
N7: (227.576,141.245,-15.965)
N9: (226.926,142.735,-14.421)
O5': (222.975,142.073,-13.045)
O3': (225.363,145.370,-11.563)
OP1: (233.165,143.129,-22.405)
OP2: (231.379,143.139,-20.564)
C3': (231.318,138.687,-23.063)
C1': (231.121,137.368,-21.115)
C5': (233.196,140.112,-22.087)
O4': (232.318,138.124,-21.009)
C8: (230.172,139.219,-19.660)
O2': (231.231,136.263,-23.261)
C6: (227.125,138.052,-18.392)
C5: (228.348,138.371,-18.978)
C4: (228.927,137.421,-19.793)
P: (232.547,142.492,-21.198)
C4': (232.624,138.731,-22.290)
C2': (230.696,137.386,-22.586)
C2: (227.267,136.019,-19.463)
N1: (226.599,136.842,-18.654)
N3: (228.424,136.208,-20.083)
N6: (226.455,138.877,-17.599)
N7: (229.141,139.502,-18.905)
N9: (230.116,137.973,-20.229)
O5': (232.185,141.004,-21.592)
O3': (231.516,138.711,-24.450)
OP2: (231.379,143.139,-20.564)
C3': (231.318,138.687,-23.063)
C1': (231.121,137.368,-21.115)
C5': (233.196,140.112,-22.087)
O4': (232.318,138.124,-21.009)
C8: (230.172,139.219,-19.660)
O2': (231.231,136.263,-23.261)
C6: (227.125,138.052,-18.392)
C5: (228.348,138.371,-18.978)
C4: (228.927,137.421,-19.793)
P: (232.547,142.492,-21.198)
C4': (232.624,138.731,-22.290)
C2': (230.696,137.386,-22.586)
C2: (227.267,136.019,-19.463)
N1: (226.599,136.842,-18.654)
N3: (228.424,136.208,-20.083)
N6: (226.455,138.877,-17.599)
N7: (229.141,139.502,-18.905)
N9: (230.116,137.973,-20.229)
O5': (232.185,141.004,-21.592)
O3': (231.516,138.711,-24.450)
Image (generated by PyMOL):