Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A51:A118
Extra
PDB:
ATOM 1 O3' G A 50 -30.214 -56.721 60.355 1.00 0.01 O
ATOM 2 P A A 51 -30.179 -58.190 59.638 1.00 5.84 P
ATOM 3 OP1 A A 51 -29.295 -59.062 60.442 1.00 5.84 O
ATOM 4 OP2 A A 51 -29.854 -57.993 58.223 1.00 5.84 O
ATOM 5 O5' A A 51 -31.666 -58.691 59.766 1.00 5.84 O
ATOM 6 C5' A A 51 -32.096 -59.370 60.931 1.00 5.84 C
ATOM 7 C4' A A 51 -33.589 -59.482 60.965 1.00 5.84 C
ATOM 8 O4' A A 51 -34.161 -58.173 61.162 1.00 5.84 O
ATOM 9 C3' A A 51 -34.213 -60.012 59.701 1.00 5.84 C
ATOM 10 O3' A A 51 -34.348 -61.418 59.753 1.00 5.84 O
ATOM 11 C2' A A 51 -35.546 -59.265 59.612 1.00 5.84 C
ATOM 12 O2' A A 51 -36.540 -59.918 60.381 1.00 5.84 O
ATOM 13 C1' A A 51 -35.237 -57.960 60.302 1.00 5.84 C
ATOM 14 N9 A A 51 -34.872 -56.876 59.386 1.00 6.11 N
ATOM 15 C8 A A 51 -33.604 -56.395 59.184 1.00 6.11 C
ATOM 16 N7 A A 51 -33.551 -55.369 58.389 1.00 6.11 N
ATOM 17 C5 A A 51 -34.873 -55.126 58.086 1.00 6.11 C
ATOM 18 C6 A A 51 -35.490 -54.169 57.274 1.00 6.11 C
ATOM 19 N6 A A 51 -34.816 -53.230 56.597 1.00 6.11 N
ATOM 20 N1 A A 51 -36.838 -54.219 57.178 1.00 6.11 N
ATOM 21 C2 A A 51 -37.516 -55.145 57.848 1.00 6.11 C
ATOM 22 N3 A A 51 -37.042 -56.094 58.639 1.00 6.11 N
ATOM 23 C4 A A 51 -35.704 -56.031 58.714 1.00 6.11 C
ATOM 24 P A A 52 -34.039 -62.318 58.471 1.00 0.01 P
ATOM 25 OP1 A A 52 -33.999 -63.719 58.933 1.00 0.01 O
ATOM 26 OP2 A A 52 -32.834 -61.753 57.809 1.00 0.01 O
ATOM 27 O5' A A 52 -35.325 -62.087 57.563 1.00 0.01 O
TER
ATOM 1 O3' A B 117 -35.942 -46.812 55.506 1.00 0.01 O
ATOM 2 P A B 118 -35.184 -45.431 55.716 1.00 0.01 P
ATOM 3 OP1 A B 118 -35.815 -44.756 56.863 1.00 0.01 O
ATOM 4 OP2 A B 118 -35.153 -44.743 54.405 1.00 0.01 O
ATOM 5 O5' A B 118 -33.726 -45.893 56.115 1.00 0.01 O
ATOM 6 C5' A B 118 -32.713 -46.036 55.129 1.00 0.01 C
ATOM 7 C4' A B 118 -31.411 -46.440 55.750 1.00 0.01 C
ATOM 8 O4' A B 118 -31.600 -47.654 56.513 1.00 0.01 O
ATOM 9 C3' A B 118 -30.281 -46.733 54.779 1.00 0.01 C
ATOM 10 O3' A B 118 -29.058 -46.255 55.323 1.00 0.01 O
ATOM 11 C2' A B 118 -30.243 -48.240 54.751 1.00 0.01 C
ATOM 12 O2' A B 118 -28.995 -48.763 54.392 1.00 0.01 O
ATOM 13 C1' A B 118 -30.571 -48.545 56.185 1.00 0.01 C
ATOM 14 N9 A B 118 -31.010 -49.909 56.445 1.00 0.01 N
ATOM 15 C8 A B 118 -32.142 -50.532 56.068 1.00 0.01 C
ATOM 16 N7 A B 118 -32.209 -51.755 56.522 1.00 0.01 N
ATOM 17 C5 A B 118 -31.053 -51.948 57.255 1.00 0.01 C
ATOM 18 C6 A B 118 -30.531 -53.024 57.989 1.00 0.01 C
ATOM 19 N6 A B 118 -31.122 -54.189 58.093 1.00 0.01 N
ATOM 20 N1 A B 118 -29.368 -52.910 58.612 1.00 0.01 N
ATOM 21 C2 A B 118 -28.759 -51.746 58.493 1.00 0.01 C
ATOM 22 N3 A B 118 -29.144 -50.659 57.836 1.00 0.01 N
ATOM 23 C4 A B 118 -30.315 -50.813 57.215 1.00 0.01 C
ATOM 24 P U B 119 -28.683 -44.704 55.191 1.00 0.01 P
ATOM 25 OP1 U B 119 -29.443 -44.186 54.047 1.00 0.01 O
ATOM 26 OP2 U B 119 -27.234 -44.608 55.172 1.00 0.01 O
ATOM 27 O5' U B 119 -29.249 -44.078 56.545 1.00 0.01 O
TER
ATOM 2 P A A 51 -30.179 -58.190 59.638 1.00 5.84 P
ATOM 3 OP1 A A 51 -29.295 -59.062 60.442 1.00 5.84 O
ATOM 4 OP2 A A 51 -29.854 -57.993 58.223 1.00 5.84 O
ATOM 5 O5' A A 51 -31.666 -58.691 59.766 1.00 5.84 O
ATOM 6 C5' A A 51 -32.096 -59.370 60.931 1.00 5.84 C
ATOM 7 C4' A A 51 -33.589 -59.482 60.965 1.00 5.84 C
ATOM 8 O4' A A 51 -34.161 -58.173 61.162 1.00 5.84 O
ATOM 9 C3' A A 51 -34.213 -60.012 59.701 1.00 5.84 C
ATOM 10 O3' A A 51 -34.348 -61.418 59.753 1.00 5.84 O
ATOM 11 C2' A A 51 -35.546 -59.265 59.612 1.00 5.84 C
ATOM 12 O2' A A 51 -36.540 -59.918 60.381 1.00 5.84 O
ATOM 13 C1' A A 51 -35.237 -57.960 60.302 1.00 5.84 C
ATOM 14 N9 A A 51 -34.872 -56.876 59.386 1.00 6.11 N
ATOM 15 C8 A A 51 -33.604 -56.395 59.184 1.00 6.11 C
ATOM 16 N7 A A 51 -33.551 -55.369 58.389 1.00 6.11 N
ATOM 17 C5 A A 51 -34.873 -55.126 58.086 1.00 6.11 C
ATOM 18 C6 A A 51 -35.490 -54.169 57.274 1.00 6.11 C
ATOM 19 N6 A A 51 -34.816 -53.230 56.597 1.00 6.11 N
ATOM 20 N1 A A 51 -36.838 -54.219 57.178 1.00 6.11 N
ATOM 21 C2 A A 51 -37.516 -55.145 57.848 1.00 6.11 C
ATOM 22 N3 A A 51 -37.042 -56.094 58.639 1.00 6.11 N
ATOM 23 C4 A A 51 -35.704 -56.031 58.714 1.00 6.11 C
ATOM 24 P A A 52 -34.039 -62.318 58.471 1.00 0.01 P
ATOM 25 OP1 A A 52 -33.999 -63.719 58.933 1.00 0.01 O
ATOM 26 OP2 A A 52 -32.834 -61.753 57.809 1.00 0.01 O
ATOM 27 O5' A A 52 -35.325 -62.087 57.563 1.00 0.01 O
TER
ATOM 1 O3' A B 117 -35.942 -46.812 55.506 1.00 0.01 O
ATOM 2 P A B 118 -35.184 -45.431 55.716 1.00 0.01 P
ATOM 3 OP1 A B 118 -35.815 -44.756 56.863 1.00 0.01 O
ATOM 4 OP2 A B 118 -35.153 -44.743 54.405 1.00 0.01 O
ATOM 5 O5' A B 118 -33.726 -45.893 56.115 1.00 0.01 O
ATOM 6 C5' A B 118 -32.713 -46.036 55.129 1.00 0.01 C
ATOM 7 C4' A B 118 -31.411 -46.440 55.750 1.00 0.01 C
ATOM 8 O4' A B 118 -31.600 -47.654 56.513 1.00 0.01 O
ATOM 9 C3' A B 118 -30.281 -46.733 54.779 1.00 0.01 C
ATOM 10 O3' A B 118 -29.058 -46.255 55.323 1.00 0.01 O
ATOM 11 C2' A B 118 -30.243 -48.240 54.751 1.00 0.01 C
ATOM 12 O2' A B 118 -28.995 -48.763 54.392 1.00 0.01 O
ATOM 13 C1' A B 118 -30.571 -48.545 56.185 1.00 0.01 C
ATOM 14 N9 A B 118 -31.010 -49.909 56.445 1.00 0.01 N
ATOM 15 C8 A B 118 -32.142 -50.532 56.068 1.00 0.01 C
ATOM 16 N7 A B 118 -32.209 -51.755 56.522 1.00 0.01 N
ATOM 17 C5 A B 118 -31.053 -51.948 57.255 1.00 0.01 C
ATOM 18 C6 A B 118 -30.531 -53.024 57.989 1.00 0.01 C
ATOM 19 N6 A B 118 -31.122 -54.189 58.093 1.00 0.01 N
ATOM 20 N1 A B 118 -29.368 -52.910 58.612 1.00 0.01 N
ATOM 21 C2 A B 118 -28.759 -51.746 58.493 1.00 0.01 C
ATOM 22 N3 A B 118 -29.144 -50.659 57.836 1.00 0.01 N
ATOM 23 C4 A B 118 -30.315 -50.813 57.215 1.00 0.01 C
ATOM 24 P U B 119 -28.683 -44.704 55.191 1.00 0.01 P
ATOM 25 OP1 U B 119 -29.443 -44.186 54.047 1.00 0.01 O
ATOM 26 OP2 U B 119 -27.234 -44.608 55.172 1.00 0.01 O
ATOM 27 O5' U B 119 -29.249 -44.078 56.545 1.00 0.01 O
TER
Atoms:
OP1: (-29.295,-59.062,60.442)
OP2: (-29.854,-57.993,58.223)
C3': (-34.213,-60.012,59.701)
C1': (-35.237,-57.960,60.302)
C5': (-32.096,-59.370,60.931)
O4': (-34.161,-58.173,61.162)
C8: (-33.604,-56.395,59.184)
O2': (-36.540,-59.918,60.381)
C6: (-35.490,-54.169,57.274)
C5: (-34.873,-55.126,58.086)
C4: (-35.704,-56.031,58.714)
P: (-30.179,-58.190,59.638)
C4': (-33.589,-59.482,60.965)
C2': (-35.546,-59.265,59.612)
C2: (-37.516,-55.145,57.848)
N1: (-36.838,-54.219,57.178)
N3: (-37.042,-56.094,58.639)
N6: (-34.816,-53.230,56.597)
N7: (-33.551,-55.369,58.389)
N9: (-34.872,-56.876,59.386)
O5': (-31.666,-58.691,59.766)
O3': (-34.348,-61.418,59.753)
OP2: (-29.854,-57.993,58.223)
C3': (-34.213,-60.012,59.701)
C1': (-35.237,-57.960,60.302)
C5': (-32.096,-59.370,60.931)
O4': (-34.161,-58.173,61.162)
C8: (-33.604,-56.395,59.184)
O2': (-36.540,-59.918,60.381)
C6: (-35.490,-54.169,57.274)
C5: (-34.873,-55.126,58.086)
C4: (-35.704,-56.031,58.714)
P: (-30.179,-58.190,59.638)
C4': (-33.589,-59.482,60.965)
C2': (-35.546,-59.265,59.612)
C2: (-37.516,-55.145,57.848)
N1: (-36.838,-54.219,57.178)
N3: (-37.042,-56.094,58.639)
N6: (-34.816,-53.230,56.597)
N7: (-33.551,-55.369,58.389)
N9: (-34.872,-56.876,59.386)
O5': (-31.666,-58.691,59.766)
O3': (-34.348,-61.418,59.753)
OP1: (-35.815,-44.756,56.863)
OP2: (-35.153,-44.743,54.405)
C3': (-30.281,-46.733,54.779)
C1': (-30.571,-48.545,56.185)
C5': (-32.713,-46.036,55.129)
O4': (-31.600,-47.654,56.513)
C8: (-32.142,-50.532,56.068)
O2': (-28.995,-48.763,54.392)
C6: (-30.531,-53.024,57.989)
C5: (-31.053,-51.948,57.255)
C4: (-30.315,-50.813,57.215)
P: (-35.184,-45.431,55.716)
C4': (-31.411,-46.440,55.750)
C2': (-30.243,-48.240,54.751)
C2: (-28.759,-51.746,58.493)
N1: (-29.368,-52.910,58.612)
N3: (-29.144,-50.659,57.836)
N6: (-31.122,-54.189,58.093)
N7: (-32.209,-51.755,56.522)
N9: (-31.010,-49.909,56.445)
O5': (-33.726,-45.893,56.115)
O3': (-29.058,-46.255,55.323)
OP2: (-35.153,-44.743,54.405)
C3': (-30.281,-46.733,54.779)
C1': (-30.571,-48.545,56.185)
C5': (-32.713,-46.036,55.129)
O4': (-31.600,-47.654,56.513)
C8: (-32.142,-50.532,56.068)
O2': (-28.995,-48.763,54.392)
C6: (-30.531,-53.024,57.989)
C5: (-31.053,-51.948,57.255)
C4: (-30.315,-50.813,57.215)
P: (-35.184,-45.431,55.716)
C4': (-31.411,-46.440,55.750)
C2': (-30.243,-48.240,54.751)
C2: (-28.759,-51.746,58.493)
N1: (-29.368,-52.910,58.612)
N3: (-29.144,-50.659,57.836)
N6: (-31.122,-54.189,58.093)
N7: (-32.209,-51.755,56.522)
N9: (-31.010,-49.909,56.445)
O5': (-33.726,-45.893,56.115)
O3': (-29.058,-46.255,55.323)
Image (generated by PyMOL):