Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01492:01616
Extra
PDB:
ATOM 1 O3' G A1491 105.952 168.202 55.913 1.00 63.01 O
ATOM 2 P A A1492 105.884 167.124 57.098 1.00 63.56 P
ATOM 3 OP1 A A1492 105.589 165.807 56.479 1.00 63.03 O
ATOM 4 OP2 A A1492 104.989 167.665 58.156 1.00 62.59 O
ATOM 5 O5' A A1492 107.368 167.083 57.670 1.00 62.75 O
ATOM 6 C5' A A1492 107.635 166.568 58.984 1.00 61.88 C
ATOM 7 C4' A A1492 108.876 165.721 58.954 1.00 61.68 C
ATOM 8 O4' A A1492 108.667 164.643 58.000 1.00 61.32 O
ATOM 9 C3' A A1492 110.149 166.433 58.502 1.00 62.47 C
ATOM 10 O3' A A1492 111.272 165.812 59.127 1.00 64.03 O
ATOM 11 C2' A A1492 110.189 166.105 57.013 1.00 61.61 C
ATOM 12 O2' A A1492 111.485 166.190 56.448 1.00 62.93 O
ATOM 13 C1' A A1492 109.698 164.661 57.040 1.00 59.96 C
ATOM 14 N9 A A1492 109.191 164.125 55.779 1.00 57.33 N
ATOM 15 C8 A A1492 108.050 164.449 55.090 1.00 55.93 C
ATOM 16 N7 A A1492 107.897 163.772 53.977 1.00 54.48 N
ATOM 17 C5 A A1492 109.010 162.945 53.932 1.00 54.68 C
ATOM 18 C6 A A1492 109.436 161.975 53.004 1.00 55.14 C
ATOM 19 N6 A A1492 108.755 161.651 51.903 1.00 55.03 N
ATOM 20 N1 A A1492 110.601 161.334 53.254 1.00 55.66 N
ATOM 21 C2 A A1492 111.276 161.643 54.373 1.00 55.76 C
ATOM 22 N3 A A1492 110.971 162.525 55.325 1.00 55.61 N
ATOM 23 C4 A A1492 109.815 163.151 55.038 1.00 55.87 C
ATOM 24 P C A1493 111.923 166.455 60.448 1.00 64.93 P
ATOM 25 OP1 C A1493 111.336 167.801 60.696 1.00 63.38 O
ATOM 26 OP2 C A1493 113.393 166.310 60.288 1.00 65.23 O
ATOM 27 O5' C A1493 111.461 165.474 61.616 1.00 64.50 O
TER
ATOM 1 O3' A B1615 108.070 157.071 50.439 1.00 56.68 O
ATOM 2 P A B1616 108.851 158.153 49.544 1.00 56.36 P
ATOM 3 OP1 A B1616 109.784 157.390 48.667 1.00 54.08 O
ATOM 4 OP2 A B1616 109.376 159.235 50.428 1.00 56.48 O
ATOM 5 O5' A B1616 107.721 158.785 48.627 1.00 54.50 O
ATOM 6 C5' A B1616 107.046 157.988 47.651 1.00 53.70 C
ATOM 7 C4' A B1616 105.655 158.508 47.451 1.00 53.49 C
ATOM 8 O4' A B1616 105.019 158.591 48.752 1.00 51.97 O
ATOM 9 C3' A B1616 105.564 159.930 46.925 1.00 53.87 C
ATOM 10 O3' A B1616 105.722 159.993 45.514 1.00 56.42 O
ATOM 11 C2' A B1616 104.183 160.347 47.401 1.00 53.42 C
ATOM 12 O2' A B1616 103.133 159.782 46.635 1.00 52.88 O
ATOM 13 C1' A B1616 104.177 159.729 48.797 1.00 52.43 C
ATOM 14 N9 A B1616 104.711 160.644 49.804 1.00 52.22 N
ATOM 15 C8 A B1616 105.953 160.648 50.398 1.00 51.37 C
ATOM 16 N7 A B1616 106.113 161.606 51.281 1.00 52.10 N
ATOM 17 C5 A B1616 104.898 162.282 51.263 1.00 53.25 C
ATOM 18 C6 A B1616 104.419 163.404 51.975 1.00 54.44 C
ATOM 19 N6 A B1616 105.141 164.076 52.880 1.00 54.38 N
ATOM 20 N1 A B1616 103.153 163.818 51.718 1.00 54.19 N
ATOM 21 C2 A B1616 102.430 163.149 50.811 1.00 53.36 C
ATOM 22 N3 A B1616 102.768 162.089 50.080 1.00 53.52 N
ATOM 23 C4 A B1616 104.027 161.701 50.356 1.00 52.96 C
ATOM 24 P A B1617 106.313 161.331 44.836 1.00 58.40 P
ATOM 25 OP1 A B1617 106.734 160.969 43.449 1.00 56.56 O
ATOM 26 OP2 A B1617 107.300 161.940 45.773 1.00 57.74 O
ATOM 27 O5' A B1617 105.054 162.302 44.739 1.00 55.70 O
TER
ATOM 2 P A A1492 105.884 167.124 57.098 1.00 63.56 P
ATOM 3 OP1 A A1492 105.589 165.807 56.479 1.00 63.03 O
ATOM 4 OP2 A A1492 104.989 167.665 58.156 1.00 62.59 O
ATOM 5 O5' A A1492 107.368 167.083 57.670 1.00 62.75 O
ATOM 6 C5' A A1492 107.635 166.568 58.984 1.00 61.88 C
ATOM 7 C4' A A1492 108.876 165.721 58.954 1.00 61.68 C
ATOM 8 O4' A A1492 108.667 164.643 58.000 1.00 61.32 O
ATOM 9 C3' A A1492 110.149 166.433 58.502 1.00 62.47 C
ATOM 10 O3' A A1492 111.272 165.812 59.127 1.00 64.03 O
ATOM 11 C2' A A1492 110.189 166.105 57.013 1.00 61.61 C
ATOM 12 O2' A A1492 111.485 166.190 56.448 1.00 62.93 O
ATOM 13 C1' A A1492 109.698 164.661 57.040 1.00 59.96 C
ATOM 14 N9 A A1492 109.191 164.125 55.779 1.00 57.33 N
ATOM 15 C8 A A1492 108.050 164.449 55.090 1.00 55.93 C
ATOM 16 N7 A A1492 107.897 163.772 53.977 1.00 54.48 N
ATOM 17 C5 A A1492 109.010 162.945 53.932 1.00 54.68 C
ATOM 18 C6 A A1492 109.436 161.975 53.004 1.00 55.14 C
ATOM 19 N6 A A1492 108.755 161.651 51.903 1.00 55.03 N
ATOM 20 N1 A A1492 110.601 161.334 53.254 1.00 55.66 N
ATOM 21 C2 A A1492 111.276 161.643 54.373 1.00 55.76 C
ATOM 22 N3 A A1492 110.971 162.525 55.325 1.00 55.61 N
ATOM 23 C4 A A1492 109.815 163.151 55.038 1.00 55.87 C
ATOM 24 P C A1493 111.923 166.455 60.448 1.00 64.93 P
ATOM 25 OP1 C A1493 111.336 167.801 60.696 1.00 63.38 O
ATOM 26 OP2 C A1493 113.393 166.310 60.288 1.00 65.23 O
ATOM 27 O5' C A1493 111.461 165.474 61.616 1.00 64.50 O
TER
ATOM 1 O3' A B1615 108.070 157.071 50.439 1.00 56.68 O
ATOM 2 P A B1616 108.851 158.153 49.544 1.00 56.36 P
ATOM 3 OP1 A B1616 109.784 157.390 48.667 1.00 54.08 O
ATOM 4 OP2 A B1616 109.376 159.235 50.428 1.00 56.48 O
ATOM 5 O5' A B1616 107.721 158.785 48.627 1.00 54.50 O
ATOM 6 C5' A B1616 107.046 157.988 47.651 1.00 53.70 C
ATOM 7 C4' A B1616 105.655 158.508 47.451 1.00 53.49 C
ATOM 8 O4' A B1616 105.019 158.591 48.752 1.00 51.97 O
ATOM 9 C3' A B1616 105.564 159.930 46.925 1.00 53.87 C
ATOM 10 O3' A B1616 105.722 159.993 45.514 1.00 56.42 O
ATOM 11 C2' A B1616 104.183 160.347 47.401 1.00 53.42 C
ATOM 12 O2' A B1616 103.133 159.782 46.635 1.00 52.88 O
ATOM 13 C1' A B1616 104.177 159.729 48.797 1.00 52.43 C
ATOM 14 N9 A B1616 104.711 160.644 49.804 1.00 52.22 N
ATOM 15 C8 A B1616 105.953 160.648 50.398 1.00 51.37 C
ATOM 16 N7 A B1616 106.113 161.606 51.281 1.00 52.10 N
ATOM 17 C5 A B1616 104.898 162.282 51.263 1.00 53.25 C
ATOM 18 C6 A B1616 104.419 163.404 51.975 1.00 54.44 C
ATOM 19 N6 A B1616 105.141 164.076 52.880 1.00 54.38 N
ATOM 20 N1 A B1616 103.153 163.818 51.718 1.00 54.19 N
ATOM 21 C2 A B1616 102.430 163.149 50.811 1.00 53.36 C
ATOM 22 N3 A B1616 102.768 162.089 50.080 1.00 53.52 N
ATOM 23 C4 A B1616 104.027 161.701 50.356 1.00 52.96 C
ATOM 24 P A B1617 106.313 161.331 44.836 1.00 58.40 P
ATOM 25 OP1 A B1617 106.734 160.969 43.449 1.00 56.56 O
ATOM 26 OP2 A B1617 107.300 161.940 45.773 1.00 57.74 O
ATOM 27 O5' A B1617 105.054 162.302 44.739 1.00 55.70 O
TER
Atoms:
OP1: (105.589,165.807,56.479)
OP2: (104.989,167.665,58.156)
C3': (110.149,166.433,58.502)
C1': (109.698,164.661,57.040)
C5': (107.635,166.568,58.984)
O4': (108.667,164.643,58.000)
C8: (108.050,164.449,55.090)
O2': (111.485,166.190,56.448)
C6: (109.436,161.975,53.004)
C5: (109.010,162.945,53.932)
C4: (109.815,163.151,55.038)
P: (105.884,167.124,57.098)
C4': (108.876,165.721,58.954)
C2': (110.189,166.105,57.013)
C2: (111.276,161.643,54.373)
N1: (110.601,161.334,53.254)
N3: (110.971,162.525,55.325)
N6: (108.755,161.651,51.903)
N7: (107.897,163.772,53.977)
N9: (109.191,164.125,55.779)
O5': (107.368,167.083,57.670)
O3': (111.272,165.812,59.127)
OP2: (104.989,167.665,58.156)
C3': (110.149,166.433,58.502)
C1': (109.698,164.661,57.040)
C5': (107.635,166.568,58.984)
O4': (108.667,164.643,58.000)
C8: (108.050,164.449,55.090)
O2': (111.485,166.190,56.448)
C6: (109.436,161.975,53.004)
C5: (109.010,162.945,53.932)
C4: (109.815,163.151,55.038)
P: (105.884,167.124,57.098)
C4': (108.876,165.721,58.954)
C2': (110.189,166.105,57.013)
C2: (111.276,161.643,54.373)
N1: (110.601,161.334,53.254)
N3: (110.971,162.525,55.325)
N6: (108.755,161.651,51.903)
N7: (107.897,163.772,53.977)
N9: (109.191,164.125,55.779)
O5': (107.368,167.083,57.670)
O3': (111.272,165.812,59.127)
OP1: (109.784,157.390,48.667)
OP2: (109.376,159.235,50.428)
C3': (105.564,159.930,46.925)
C1': (104.177,159.729,48.797)
C5': (107.046,157.988,47.651)
O4': (105.019,158.591,48.752)
C8: (105.953,160.648,50.398)
O2': (103.133,159.782,46.635)
C6: (104.419,163.404,51.975)
C5: (104.898,162.282,51.263)
C4: (104.027,161.701,50.356)
P: (108.851,158.153,49.544)
C4': (105.655,158.508,47.451)
C2': (104.183,160.347,47.401)
C2: (102.430,163.149,50.811)
N1: (103.153,163.818,51.718)
N3: (102.768,162.089,50.080)
N6: (105.141,164.076,52.880)
N7: (106.113,161.606,51.281)
N9: (104.711,160.644,49.804)
O5': (107.721,158.785,48.627)
O3': (105.722,159.993,45.514)
OP2: (109.376,159.235,50.428)
C3': (105.564,159.930,46.925)
C1': (104.177,159.729,48.797)
C5': (107.046,157.988,47.651)
O4': (105.019,158.591,48.752)
C8: (105.953,160.648,50.398)
O2': (103.133,159.782,46.635)
C6: (104.419,163.404,51.975)
C5: (104.898,162.282,51.263)
C4: (104.027,161.701,50.356)
P: (108.851,158.153,49.544)
C4': (105.655,158.508,47.451)
C2': (104.183,160.347,47.401)
C2: (102.430,163.149,50.811)
N1: (103.153,163.818,51.718)
N3: (102.768,162.089,50.080)
N6: (105.141,164.076,52.880)
N7: (106.113,161.606,51.281)
N9: (104.711,160.644,49.804)
O5': (107.721,158.785,48.627)
O3': (105.722,159.993,45.514)
Image (generated by PyMOL):