Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1EXD:B23:B41
Extra
PDB:
ATOM 1 O3' C A 22 24.879 9.937 23.443 1.00 53.00 O
ATOM 2 P A A 23 24.256 8.742 24.299 1.00 50.76 P
ATOM 3 OP1 A A 23 25.035 7.509 24.024 1.00 49.43 O
ATOM 4 OP2 A A 23 22.789 8.762 24.055 1.00 54.56 O
ATOM 5 O5' A A 23 24.497 9.199 25.805 1.00 47.24 O
ATOM 6 C5' A A 23 25.825 9.255 26.331 1.00 50.68 C
ATOM 7 C4' A A 23 25.802 9.589 27.800 1.00 54.11 C
ATOM 8 O4' A A 23 25.239 10.911 27.985 1.00 53.73 O
ATOM 9 C3' A A 23 24.915 8.740 28.684 1.00 59.16 C
ATOM 10 O3' A A 23 25.470 7.467 28.978 1.00 66.65 O
ATOM 11 C2' A A 23 24.803 9.629 29.912 1.00 57.38 C
ATOM 12 O2' A A 23 25.983 9.660 30.687 1.00 56.68 O
ATOM 13 C1' A A 23 24.595 10.987 29.249 1.00 52.02 C
ATOM 14 N9 A A 23 23.175 11.202 29.022 1.00 49.37 N
ATOM 15 C8 A A 23 22.450 10.884 27.906 1.00 52.16 C
ATOM 16 N7 A A 23 21.168 11.133 28.023 1.00 52.59 N
ATOM 17 C5 A A 23 21.048 11.656 29.298 1.00 48.11 C
ATOM 18 C6 A A 23 19.946 12.083 30.029 1.00 52.70 C
ATOM 19 N6 A A 23 18.693 12.026 29.571 1.00 55.36 N
ATOM 20 N1 A A 23 20.164 12.563 31.271 1.00 55.89 N
ATOM 21 C2 A A 23 21.416 12.581 31.737 1.00 54.65 C
ATOM 22 N3 A A 23 22.537 12.184 31.146 1.00 52.43 N
ATOM 23 C4 A A 23 22.279 11.726 29.914 1.00 49.35 C
ATOM 24 P C A 24 24.484 6.219 29.218 1.00 66.96 P
ATOM 25 OP1 C A 24 25.327 5.019 29.449 1.00 68.38 O
ATOM 26 OP2 C A 24 23.460 6.206 28.135 1.00 68.73 O
ATOM 27 O5' C A 24 23.711 6.601 30.556 1.00 60.38 O
TER
ATOM 1 O3' G B 40 8.882 11.771 34.256 1.00 89.35 O
ATOM 2 P A B 41 8.753 11.813 35.864 1.00 96.63 P
ATOM 3 OP1 A B 41 7.962 10.636 36.306 1.00 8.00 O
ATOM 4 OP2 A B 41 8.292 13.186 36.231 1.00 97.73 O
ATOM 5 O5' A B 41 10.236 11.650 36.417 1.00 91.37 O
ATOM 6 C5' A B 41 11.010 12.796 36.775 1.00 83.52 C
ATOM 7 C4' A B 41 12.396 12.380 37.182 1.00 74.02 C
ATOM 8 O4' A B 41 12.910 11.425 36.235 1.00 70.44 O
ATOM 9 C3' A B 41 13.371 13.537 37.173 1.00 73.47 C
ATOM 10 O3' A B 41 13.394 14.102 38.462 1.00 75.88 O
ATOM 11 C2' A B 41 14.688 12.862 36.860 1.00 71.37 C
ATOM 12 O2' A B 41 15.219 12.275 38.022 1.00 73.48 O
ATOM 13 C1' A B 41 14.237 11.762 35.901 1.00 72.01 C
ATOM 14 N9 A B 41 14.253 12.127 34.489 1.00 70.62 N
ATOM 15 C8 A B 41 13.165 12.321 33.680 1.00 71.62 C
ATOM 16 N7 A B 41 13.474 12.568 32.431 1.00 76.09 N
ATOM 17 C5 A B 41 14.862 12.554 32.422 1.00 71.03 C
ATOM 18 C6 A B 41 15.796 12.747 31.399 1.00 69.94 C
ATOM 19 N6 A B 41 15.460 13.004 30.134 1.00 71.86 N
ATOM 20 N1 A B 41 17.102 12.667 31.720 1.00 73.09 N
ATOM 21 C2 A B 41 17.437 12.418 32.993 1.00 73.42 C
ATOM 22 N3 A B 41 16.651 12.222 34.045 1.00 73.23 N
ATOM 23 C4 A B 41 15.357 12.302 33.688 1.00 71.18 C
ATOM 24 P G B 42 12.308 15.211 38.855 1.00 82.07 P
ATOM 25 OP1 G B 42 11.378 14.616 39.840 1.00 87.92 O
ATOM 26 OP2 G B 42 11.766 15.815 37.604 1.00 82.91 O
ATOM 27 O5' G B 42 13.168 16.312 39.602 1.00 84.42 O
TER
ATOM 2 P A A 23 24.256 8.742 24.299 1.00 50.76 P
ATOM 3 OP1 A A 23 25.035 7.509 24.024 1.00 49.43 O
ATOM 4 OP2 A A 23 22.789 8.762 24.055 1.00 54.56 O
ATOM 5 O5' A A 23 24.497 9.199 25.805 1.00 47.24 O
ATOM 6 C5' A A 23 25.825 9.255 26.331 1.00 50.68 C
ATOM 7 C4' A A 23 25.802 9.589 27.800 1.00 54.11 C
ATOM 8 O4' A A 23 25.239 10.911 27.985 1.00 53.73 O
ATOM 9 C3' A A 23 24.915 8.740 28.684 1.00 59.16 C
ATOM 10 O3' A A 23 25.470 7.467 28.978 1.00 66.65 O
ATOM 11 C2' A A 23 24.803 9.629 29.912 1.00 57.38 C
ATOM 12 O2' A A 23 25.983 9.660 30.687 1.00 56.68 O
ATOM 13 C1' A A 23 24.595 10.987 29.249 1.00 52.02 C
ATOM 14 N9 A A 23 23.175 11.202 29.022 1.00 49.37 N
ATOM 15 C8 A A 23 22.450 10.884 27.906 1.00 52.16 C
ATOM 16 N7 A A 23 21.168 11.133 28.023 1.00 52.59 N
ATOM 17 C5 A A 23 21.048 11.656 29.298 1.00 48.11 C
ATOM 18 C6 A A 23 19.946 12.083 30.029 1.00 52.70 C
ATOM 19 N6 A A 23 18.693 12.026 29.571 1.00 55.36 N
ATOM 20 N1 A A 23 20.164 12.563 31.271 1.00 55.89 N
ATOM 21 C2 A A 23 21.416 12.581 31.737 1.00 54.65 C
ATOM 22 N3 A A 23 22.537 12.184 31.146 1.00 52.43 N
ATOM 23 C4 A A 23 22.279 11.726 29.914 1.00 49.35 C
ATOM 24 P C A 24 24.484 6.219 29.218 1.00 66.96 P
ATOM 25 OP1 C A 24 25.327 5.019 29.449 1.00 68.38 O
ATOM 26 OP2 C A 24 23.460 6.206 28.135 1.00 68.73 O
ATOM 27 O5' C A 24 23.711 6.601 30.556 1.00 60.38 O
TER
ATOM 1 O3' G B 40 8.882 11.771 34.256 1.00 89.35 O
ATOM 2 P A B 41 8.753 11.813 35.864 1.00 96.63 P
ATOM 3 OP1 A B 41 7.962 10.636 36.306 1.00 8.00 O
ATOM 4 OP2 A B 41 8.292 13.186 36.231 1.00 97.73 O
ATOM 5 O5' A B 41 10.236 11.650 36.417 1.00 91.37 O
ATOM 6 C5' A B 41 11.010 12.796 36.775 1.00 83.52 C
ATOM 7 C4' A B 41 12.396 12.380 37.182 1.00 74.02 C
ATOM 8 O4' A B 41 12.910 11.425 36.235 1.00 70.44 O
ATOM 9 C3' A B 41 13.371 13.537 37.173 1.00 73.47 C
ATOM 10 O3' A B 41 13.394 14.102 38.462 1.00 75.88 O
ATOM 11 C2' A B 41 14.688 12.862 36.860 1.00 71.37 C
ATOM 12 O2' A B 41 15.219 12.275 38.022 1.00 73.48 O
ATOM 13 C1' A B 41 14.237 11.762 35.901 1.00 72.01 C
ATOM 14 N9 A B 41 14.253 12.127 34.489 1.00 70.62 N
ATOM 15 C8 A B 41 13.165 12.321 33.680 1.00 71.62 C
ATOM 16 N7 A B 41 13.474 12.568 32.431 1.00 76.09 N
ATOM 17 C5 A B 41 14.862 12.554 32.422 1.00 71.03 C
ATOM 18 C6 A B 41 15.796 12.747 31.399 1.00 69.94 C
ATOM 19 N6 A B 41 15.460 13.004 30.134 1.00 71.86 N
ATOM 20 N1 A B 41 17.102 12.667 31.720 1.00 73.09 N
ATOM 21 C2 A B 41 17.437 12.418 32.993 1.00 73.42 C
ATOM 22 N3 A B 41 16.651 12.222 34.045 1.00 73.23 N
ATOM 23 C4 A B 41 15.357 12.302 33.688 1.00 71.18 C
ATOM 24 P G B 42 12.308 15.211 38.855 1.00 82.07 P
ATOM 25 OP1 G B 42 11.378 14.616 39.840 1.00 87.92 O
ATOM 26 OP2 G B 42 11.766 15.815 37.604 1.00 82.91 O
ATOM 27 O5' G B 42 13.168 16.312 39.602 1.00 84.42 O
TER
Atoms:
OP1: (25.035,7.509,24.024)
OP2: (22.789,8.762,24.055)
C3': (24.915,8.740,28.684)
C1': (24.595,10.987,29.249)
C5': (25.825,9.255,26.331)
O4': (25.239,10.911,27.985)
C8: (22.450,10.884,27.906)
O2': (25.983,9.660,30.687)
C6: (19.946,12.083,30.029)
C5: (21.048,11.656,29.298)
C4: (22.279,11.726,29.914)
P: (24.256,8.742,24.299)
C4': (25.802,9.589,27.800)
C2': (24.803,9.629,29.912)
C2: (21.416,12.581,31.737)
N1: (20.164,12.563,31.271)
N3: (22.537,12.184,31.146)
N6: (18.693,12.026,29.571)
N7: (21.168,11.133,28.023)
N9: (23.175,11.202,29.022)
O5': (24.497,9.199,25.805)
O3': (25.470,7.467,28.978)
OP2: (22.789,8.762,24.055)
C3': (24.915,8.740,28.684)
C1': (24.595,10.987,29.249)
C5': (25.825,9.255,26.331)
O4': (25.239,10.911,27.985)
C8: (22.450,10.884,27.906)
O2': (25.983,9.660,30.687)
C6: (19.946,12.083,30.029)
C5: (21.048,11.656,29.298)
C4: (22.279,11.726,29.914)
P: (24.256,8.742,24.299)
C4': (25.802,9.589,27.800)
C2': (24.803,9.629,29.912)
C2: (21.416,12.581,31.737)
N1: (20.164,12.563,31.271)
N3: (22.537,12.184,31.146)
N6: (18.693,12.026,29.571)
N7: (21.168,11.133,28.023)
N9: (23.175,11.202,29.022)
O5': (24.497,9.199,25.805)
O3': (25.470,7.467,28.978)
OP1: (7.962,10.636,36.306)
OP2: (8.292,13.186,36.231)
C3': (13.371,13.537,37.173)
C1': (14.237,11.762,35.901)
C5': (11.010,12.796,36.775)
O4': (12.910,11.425,36.235)
C8: (13.165,12.321,33.680)
O2': (15.219,12.275,38.022)
C6: (15.796,12.747,31.399)
C5: (14.862,12.554,32.422)
C4: (15.357,12.302,33.688)
P: (8.753,11.813,35.864)
C4': (12.396,12.380,37.182)
C2': (14.688,12.862,36.860)
C2: (17.437,12.418,32.993)
N1: (17.102,12.667,31.720)
N3: (16.651,12.222,34.045)
N6: (15.460,13.004,30.134)
N7: (13.474,12.568,32.431)
N9: (14.253,12.127,34.489)
O5': (10.236,11.650,36.417)
O3': (13.394,14.102,38.462)
OP2: (8.292,13.186,36.231)
C3': (13.371,13.537,37.173)
C1': (14.237,11.762,35.901)
C5': (11.010,12.796,36.775)
O4': (12.910,11.425,36.235)
C8: (13.165,12.321,33.680)
O2': (15.219,12.275,38.022)
C6: (15.796,12.747,31.399)
C5: (14.862,12.554,32.422)
C4: (15.357,12.302,33.688)
P: (8.753,11.813,35.864)
C4': (12.396,12.380,37.182)
C2': (14.688,12.862,36.860)
C2: (17.437,12.418,32.993)
N1: (17.102,12.667,31.720)
N3: (16.651,12.222,34.045)
N6: (15.460,13.004,30.134)
N7: (13.474,12.568,32.431)
N9: (14.253,12.127,34.489)
O5': (10.236,11.650,36.417)
O3': (13.394,14.102,38.462)
Image (generated by PyMOL):