Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1870:A1885
Extra
PDB:
ATOM 1 O3' C A1869 104.652 93.377 41.020 1.00 77.26 O
ATOM 2 P A A1870 104.834 91.911 40.381 1.00 77.29 P
ATOM 3 OP1 A A1870 104.117 91.961 39.089 1.00 77.29 O
ATOM 4 OP2 A A1870 104.504 90.846 41.371 1.00 76.02 O
ATOM 5 O5' A A1870 106.378 91.873 40.025 1.00 77.22 O
ATOM 6 C5' A A1870 106.918 92.859 39.124 1.00 78.75 C
ATOM 7 C4' A A1870 108.419 92.790 39.124 1.00 79.60 C
ATOM 8 O4' A A1870 108.934 93.318 40.376 1.00 78.76 O
ATOM 9 C3' A A1870 108.959 91.372 39.056 1.00 79.70 C
ATOM 10 O3' A A1870 108.958 90.850 37.732 1.00 81.47 O
ATOM 11 C2' A A1870 110.324 91.517 39.710 1.00 78.77 C
ATOM 12 O2' A A1870 111.330 92.067 38.884 1.00 78.87 O
ATOM 13 C1' A A1870 109.988 92.491 40.836 1.00 78.38 C
ATOM 14 N9 A A1870 109.493 91.727 41.971 1.00 77.72 N
ATOM 15 C8 A A1870 108.218 91.262 42.222 1.00 78.25 C
ATOM 16 N7 A A1870 108.127 90.542 43.312 1.00 78.19 N
ATOM 17 C5 A A1870 109.423 90.546 43.818 1.00 76.77 C
ATOM 18 C6 A A1870 109.988 89.967 44.953 1.00 76.18 C
ATOM 19 N6 A A1870 109.293 89.256 45.839 1.00 75.79 N
ATOM 20 N1 A A1870 111.309 90.154 45.163 1.00 76.09 N
ATOM 21 C2 A A1870 111.999 90.902 44.298 1.00 76.06 C
ATOM 22 N3 A A1870 111.579 91.514 43.201 1.00 76.13 N
ATOM 23 C4 A A1870 110.266 91.286 43.011 1.00 77.06 C
ATOM 24 P C A1871 108.681 89.276 37.488 1.00 82.34 P
ATOM 25 OP1 C A1871 108.894 89.027 36.037 1.00 81.27 O
ATOM 26 OP2 C A1871 107.400 88.862 38.117 1.00 82.31 O
ATOM 27 O5' C A1871 109.851 88.559 38.297 1.00 81.90 O
TER
ATOM 1 O3' G B1884 111.904 79.375 51.579 1.00 91.15 O
ATOM 2 P A B1885 112.781 80.459 52.401 1.00 90.96 P
ATOM 3 OP1 A B1885 113.833 79.738 53.156 1.00 88.72 O
ATOM 4 OP2 A B1885 111.850 81.371 53.127 1.00 91.26 O
ATOM 5 O5' A B1885 113.511 81.344 51.291 1.00 89.74 O
ATOM 6 C5' A B1885 114.616 80.840 50.526 1.00 88.78 C
ATOM 7 C4' A B1885 115.046 81.873 49.507 1.00 88.82 C
ATOM 8 O4' A B1885 113.927 82.194 48.625 1.00 89.51 O
ATOM 9 C3' A B1885 115.459 83.214 50.080 1.00 89.15 C
ATOM 10 O3' A B1885 116.800 83.208 50.553 1.00 88.96 O
ATOM 11 C2' A B1885 115.242 84.156 48.902 1.00 89.54 C
ATOM 12 O2' A B1885 116.306 84.104 47.979 1.00 89.15 O
ATOM 13 C1' A B1885 113.966 83.576 48.274 1.00 89.76 C
ATOM 14 N9 A B1885 112.723 84.221 48.732 1.00 90.02 N
ATOM 15 C8 A B1885 111.862 83.779 49.719 1.00 89.57 C
ATOM 16 N7 A B1885 110.856 84.590 49.954 1.00 89.32 N
ATOM 17 C5 A B1885 111.051 85.634 49.052 1.00 90.41 C
ATOM 18 C6 A B1885 110.326 86.824 48.801 1.00 90.43 C
ATOM 19 N6 A B1885 109.223 87.179 49.470 1.00 90.32 N
ATOM 20 N1 A B1885 110.785 87.647 47.828 1.00 90.57 N
ATOM 21 C2 A B1885 111.895 87.301 47.164 1.00 91.16 C
ATOM 22 N3 A B1885 112.669 86.218 47.309 1.00 91.29 N
ATOM 23 C4 A B1885 112.189 85.413 48.281 1.00 90.54 C
ATOM 24 P C B1886 117.197 84.156 51.786 1.00 89.54 P
ATOM 25 OP1 C B1886 118.648 83.984 52.055 1.00 89.24 O
ATOM 26 OP2 C B1886 116.219 83.901 52.876 1.00 88.80 O
ATOM 27 O5' C B1886 116.950 85.640 51.230 1.00 89.65 O
TER
ATOM 2 P A A1870 104.834 91.911 40.381 1.00 77.29 P
ATOM 3 OP1 A A1870 104.117 91.961 39.089 1.00 77.29 O
ATOM 4 OP2 A A1870 104.504 90.846 41.371 1.00 76.02 O
ATOM 5 O5' A A1870 106.378 91.873 40.025 1.00 77.22 O
ATOM 6 C5' A A1870 106.918 92.859 39.124 1.00 78.75 C
ATOM 7 C4' A A1870 108.419 92.790 39.124 1.00 79.60 C
ATOM 8 O4' A A1870 108.934 93.318 40.376 1.00 78.76 O
ATOM 9 C3' A A1870 108.959 91.372 39.056 1.00 79.70 C
ATOM 10 O3' A A1870 108.958 90.850 37.732 1.00 81.47 O
ATOM 11 C2' A A1870 110.324 91.517 39.710 1.00 78.77 C
ATOM 12 O2' A A1870 111.330 92.067 38.884 1.00 78.87 O
ATOM 13 C1' A A1870 109.988 92.491 40.836 1.00 78.38 C
ATOM 14 N9 A A1870 109.493 91.727 41.971 1.00 77.72 N
ATOM 15 C8 A A1870 108.218 91.262 42.222 1.00 78.25 C
ATOM 16 N7 A A1870 108.127 90.542 43.312 1.00 78.19 N
ATOM 17 C5 A A1870 109.423 90.546 43.818 1.00 76.77 C
ATOM 18 C6 A A1870 109.988 89.967 44.953 1.00 76.18 C
ATOM 19 N6 A A1870 109.293 89.256 45.839 1.00 75.79 N
ATOM 20 N1 A A1870 111.309 90.154 45.163 1.00 76.09 N
ATOM 21 C2 A A1870 111.999 90.902 44.298 1.00 76.06 C
ATOM 22 N3 A A1870 111.579 91.514 43.201 1.00 76.13 N
ATOM 23 C4 A A1870 110.266 91.286 43.011 1.00 77.06 C
ATOM 24 P C A1871 108.681 89.276 37.488 1.00 82.34 P
ATOM 25 OP1 C A1871 108.894 89.027 36.037 1.00 81.27 O
ATOM 26 OP2 C A1871 107.400 88.862 38.117 1.00 82.31 O
ATOM 27 O5' C A1871 109.851 88.559 38.297 1.00 81.90 O
TER
ATOM 1 O3' G B1884 111.904 79.375 51.579 1.00 91.15 O
ATOM 2 P A B1885 112.781 80.459 52.401 1.00 90.96 P
ATOM 3 OP1 A B1885 113.833 79.738 53.156 1.00 88.72 O
ATOM 4 OP2 A B1885 111.850 81.371 53.127 1.00 91.26 O
ATOM 5 O5' A B1885 113.511 81.344 51.291 1.00 89.74 O
ATOM 6 C5' A B1885 114.616 80.840 50.526 1.00 88.78 C
ATOM 7 C4' A B1885 115.046 81.873 49.507 1.00 88.82 C
ATOM 8 O4' A B1885 113.927 82.194 48.625 1.00 89.51 O
ATOM 9 C3' A B1885 115.459 83.214 50.080 1.00 89.15 C
ATOM 10 O3' A B1885 116.800 83.208 50.553 1.00 88.96 O
ATOM 11 C2' A B1885 115.242 84.156 48.902 1.00 89.54 C
ATOM 12 O2' A B1885 116.306 84.104 47.979 1.00 89.15 O
ATOM 13 C1' A B1885 113.966 83.576 48.274 1.00 89.76 C
ATOM 14 N9 A B1885 112.723 84.221 48.732 1.00 90.02 N
ATOM 15 C8 A B1885 111.862 83.779 49.719 1.00 89.57 C
ATOM 16 N7 A B1885 110.856 84.590 49.954 1.00 89.32 N
ATOM 17 C5 A B1885 111.051 85.634 49.052 1.00 90.41 C
ATOM 18 C6 A B1885 110.326 86.824 48.801 1.00 90.43 C
ATOM 19 N6 A B1885 109.223 87.179 49.470 1.00 90.32 N
ATOM 20 N1 A B1885 110.785 87.647 47.828 1.00 90.57 N
ATOM 21 C2 A B1885 111.895 87.301 47.164 1.00 91.16 C
ATOM 22 N3 A B1885 112.669 86.218 47.309 1.00 91.29 N
ATOM 23 C4 A B1885 112.189 85.413 48.281 1.00 90.54 C
ATOM 24 P C B1886 117.197 84.156 51.786 1.00 89.54 P
ATOM 25 OP1 C B1886 118.648 83.984 52.055 1.00 89.24 O
ATOM 26 OP2 C B1886 116.219 83.901 52.876 1.00 88.80 O
ATOM 27 O5' C B1886 116.950 85.640 51.230 1.00 89.65 O
TER
Atoms:
OP1: (104.117,91.961,39.089)
OP2: (104.504,90.846,41.371)
C3': (108.959,91.372,39.056)
C1': (109.988,92.491,40.836)
C5': (106.918,92.859,39.124)
O4': (108.934,93.318,40.376)
C8: (108.218,91.262,42.222)
O2': (111.330,92.067,38.884)
C6: (109.988,89.967,44.953)
C5: (109.423,90.546,43.818)
C4: (110.266,91.286,43.011)
P: (104.834,91.911,40.381)
C4': (108.419,92.790,39.124)
C2': (110.324,91.517,39.710)
C2: (111.999,90.902,44.298)
N1: (111.309,90.154,45.163)
N3: (111.579,91.514,43.201)
N6: (109.293,89.256,45.839)
N7: (108.127,90.542,43.312)
N9: (109.493,91.727,41.971)
O5': (106.378,91.873,40.025)
O3': (108.958,90.850,37.732)
OP2: (104.504,90.846,41.371)
C3': (108.959,91.372,39.056)
C1': (109.988,92.491,40.836)
C5': (106.918,92.859,39.124)
O4': (108.934,93.318,40.376)
C8: (108.218,91.262,42.222)
O2': (111.330,92.067,38.884)
C6: (109.988,89.967,44.953)
C5: (109.423,90.546,43.818)
C4: (110.266,91.286,43.011)
P: (104.834,91.911,40.381)
C4': (108.419,92.790,39.124)
C2': (110.324,91.517,39.710)
C2: (111.999,90.902,44.298)
N1: (111.309,90.154,45.163)
N3: (111.579,91.514,43.201)
N6: (109.293,89.256,45.839)
N7: (108.127,90.542,43.312)
N9: (109.493,91.727,41.971)
O5': (106.378,91.873,40.025)
O3': (108.958,90.850,37.732)
OP1: (113.833,79.738,53.156)
OP2: (111.850,81.371,53.127)
C3': (115.459,83.214,50.080)
C1': (113.966,83.576,48.274)
C5': (114.616,80.840,50.526)
O4': (113.927,82.194,48.625)
C8: (111.862,83.779,49.719)
O2': (116.306,84.104,47.979)
C6: (110.326,86.824,48.801)
C5: (111.051,85.634,49.052)
C4: (112.189,85.413,48.281)
P: (112.781,80.459,52.401)
C4': (115.046,81.873,49.507)
C2': (115.242,84.156,48.902)
C2: (111.895,87.301,47.164)
N1: (110.785,87.647,47.828)
N3: (112.669,86.218,47.309)
N6: (109.223,87.179,49.470)
N7: (110.856,84.590,49.954)
N9: (112.723,84.221,48.732)
O5': (113.511,81.344,51.291)
O3': (116.800,83.208,50.553)
OP2: (111.850,81.371,53.127)
C3': (115.459,83.214,50.080)
C1': (113.966,83.576,48.274)
C5': (114.616,80.840,50.526)
O4': (113.927,82.194,48.625)
C8: (111.862,83.779,49.719)
O2': (116.306,84.104,47.979)
C6: (110.326,86.824,48.801)
C5: (111.051,85.634,49.052)
C4: (112.189,85.413,48.281)
P: (112.781,80.459,52.401)
C4': (115.046,81.873,49.507)
C2': (115.242,84.156,48.902)
C2: (111.895,87.301,47.164)
N1: (110.785,87.647,47.828)
N3: (112.669,86.218,47.309)
N6: (109.223,87.179,49.470)
N7: (110.856,84.590,49.954)
N9: (112.723,84.221,48.732)
O5': (113.511,81.344,51.291)
O3': (116.800,83.208,50.553)
Image (generated by PyMOL):