Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A608:A623
Extra
PDB:
ATOM 1 O3' U A 607 34.384 117.723 97.750 1.00 35.66 O
ATOM 2 P A A 608 34.154 116.686 96.555 1.00 35.47 P
ATOM 3 OP1 A A 608 32.953 117.120 95.815 1.00 34.38 O
ATOM 4 OP2 A A 608 34.207 115.329 97.129 1.00 36.48 O
ATOM 5 O5' A A 608 35.419 116.845 95.600 1.00 36.68 O
ATOM 6 C5' A A 608 35.818 118.126 95.111 1.00 33.85 C
ATOM 7 C4' A A 608 35.062 118.509 93.855 1.00 32.42 C
ATOM 8 O4' A A 608 35.322 119.911 93.654 1.00 32.79 O
ATOM 9 C3' A A 608 35.437 117.833 92.542 1.00 30.89 C
ATOM 10 O3' A A 608 34.595 116.701 92.291 1.00 30.47 O
ATOM 11 C2' A A 608 35.126 118.917 91.524 1.00 31.48 C
ATOM 12 O2' A A 608 33.749 119.007 91.245 1.00 30.51 O
ATOM 13 C1' A A 608 35.500 120.178 92.289 1.00 32.88 C
ATOM 14 N9 A A 608 36.881 120.598 92.103 1.00 35.44 N
ATOM 15 C8 A A 608 37.915 120.471 92.996 1.00 37.37 C
ATOM 16 N7 A A 608 39.046 120.951 92.563 1.00 38.72 N
ATOM 17 C5 A A 608 38.741 121.421 91.299 1.00 37.44 C
ATOM 18 C6 A A 608 39.525 122.039 90.337 1.00 38.73 C
ATOM 19 N6 A A 608 40.825 122.254 90.503 1.00 40.08 N
ATOM 20 N1 A A 608 38.935 122.420 89.187 1.00 38.53 N
ATOM 21 C2 A A 608 37.633 122.148 89.029 1.00 38.79 C
ATOM 22 N3 A A 608 36.787 121.539 89.865 1.00 37.59 N
ATOM 23 C4 A A 608 37.414 121.209 91.000 1.00 36.63 C
ATOM 24 P C A 609 35.070 115.525 91.287 1.00 31.48 P
ATOM 25 OP1 C A 609 33.880 114.695 91.010 1.00 29.25 O
ATOM 26 OP2 C A 609 36.292 114.891 91.814 1.00 29.64 O
ATOM 27 O5' C A 609 35.483 116.248 89.933 1.00 29.69 O
TER
ATOM 1 O3' G B 622 49.165 124.902 84.506 1.00 36.89 O
ATOM 2 P A B 623 48.889 126.345 85.121 1.00 37.97 P
ATOM 3 OP1 A B 623 49.842 127.297 84.513 1.00 38.32 O
ATOM 4 OP2 A B 623 48.857 126.201 86.583 1.00 39.13 O
ATOM 5 O5' A B 623 47.397 126.670 84.670 1.00 37.44 O
ATOM 6 C5' A B 623 47.023 126.840 83.288 1.00 36.29 C
ATOM 7 C4' A B 623 45.532 127.049 83.204 1.00 36.32 C
ATOM 8 O4' A B 623 44.897 125.883 83.799 1.00 37.58 O
ATOM 9 C3' A B 623 44.998 128.212 84.031 1.00 35.19 C
ATOM 10 O3' A B 623 45.033 129.438 83.315 1.00 32.93 O
ATOM 11 C2' A B 623 43.574 127.770 84.311 1.00 36.05 C
ATOM 12 O2' A B 623 42.816 127.921 83.135 1.00 36.49 O
ATOM 13 C1' A B 623 43.777 126.276 84.571 1.00 36.62 C
ATOM 14 N9 A B 623 44.076 125.925 85.958 1.00 36.63 N
ATOM 15 C8 A B 623 45.112 126.367 86.748 1.00 37.15 C
ATOM 16 N7 A B 623 45.149 125.811 87.936 1.00 36.95 N
ATOM 17 C5 A B 623 44.054 124.961 87.936 1.00 37.17 C
ATOM 18 C6 A B 623 43.542 124.088 88.898 1.00 35.95 C
ATOM 19 N6 A B 623 44.101 123.887 90.087 1.00 35.89 N
ATOM 20 N1 A B 623 42.422 123.403 88.585 1.00 36.70 N
ATOM 21 C2 A B 623 41.881 123.568 87.376 1.00 36.71 C
ATOM 22 N3 A B 623 42.279 124.342 86.380 1.00 36.68 N
ATOM 23 C4 A B 623 43.380 125.029 86.727 1.00 36.66 C
ATOM 24 P G B 624 45.719 130.733 83.977 1.00 33.86 P
ATOM 25 OP1 G B 624 46.106 131.672 82.902 1.00 32.92 O
ATOM 26 OP2 G B 624 46.758 130.259 84.937 1.00 33.94 O
ATOM 27 O5' G B 624 44.544 131.438 84.788 1.00 32.13 O
TER
ATOM 2 P A A 608 34.154 116.686 96.555 1.00 35.47 P
ATOM 3 OP1 A A 608 32.953 117.120 95.815 1.00 34.38 O
ATOM 4 OP2 A A 608 34.207 115.329 97.129 1.00 36.48 O
ATOM 5 O5' A A 608 35.419 116.845 95.600 1.00 36.68 O
ATOM 6 C5' A A 608 35.818 118.126 95.111 1.00 33.85 C
ATOM 7 C4' A A 608 35.062 118.509 93.855 1.00 32.42 C
ATOM 8 O4' A A 608 35.322 119.911 93.654 1.00 32.79 O
ATOM 9 C3' A A 608 35.437 117.833 92.542 1.00 30.89 C
ATOM 10 O3' A A 608 34.595 116.701 92.291 1.00 30.47 O
ATOM 11 C2' A A 608 35.126 118.917 91.524 1.00 31.48 C
ATOM 12 O2' A A 608 33.749 119.007 91.245 1.00 30.51 O
ATOM 13 C1' A A 608 35.500 120.178 92.289 1.00 32.88 C
ATOM 14 N9 A A 608 36.881 120.598 92.103 1.00 35.44 N
ATOM 15 C8 A A 608 37.915 120.471 92.996 1.00 37.37 C
ATOM 16 N7 A A 608 39.046 120.951 92.563 1.00 38.72 N
ATOM 17 C5 A A 608 38.741 121.421 91.299 1.00 37.44 C
ATOM 18 C6 A A 608 39.525 122.039 90.337 1.00 38.73 C
ATOM 19 N6 A A 608 40.825 122.254 90.503 1.00 40.08 N
ATOM 20 N1 A A 608 38.935 122.420 89.187 1.00 38.53 N
ATOM 21 C2 A A 608 37.633 122.148 89.029 1.00 38.79 C
ATOM 22 N3 A A 608 36.787 121.539 89.865 1.00 37.59 N
ATOM 23 C4 A A 608 37.414 121.209 91.000 1.00 36.63 C
ATOM 24 P C A 609 35.070 115.525 91.287 1.00 31.48 P
ATOM 25 OP1 C A 609 33.880 114.695 91.010 1.00 29.25 O
ATOM 26 OP2 C A 609 36.292 114.891 91.814 1.00 29.64 O
ATOM 27 O5' C A 609 35.483 116.248 89.933 1.00 29.69 O
TER
ATOM 1 O3' G B 622 49.165 124.902 84.506 1.00 36.89 O
ATOM 2 P A B 623 48.889 126.345 85.121 1.00 37.97 P
ATOM 3 OP1 A B 623 49.842 127.297 84.513 1.00 38.32 O
ATOM 4 OP2 A B 623 48.857 126.201 86.583 1.00 39.13 O
ATOM 5 O5' A B 623 47.397 126.670 84.670 1.00 37.44 O
ATOM 6 C5' A B 623 47.023 126.840 83.288 1.00 36.29 C
ATOM 7 C4' A B 623 45.532 127.049 83.204 1.00 36.32 C
ATOM 8 O4' A B 623 44.897 125.883 83.799 1.00 37.58 O
ATOM 9 C3' A B 623 44.998 128.212 84.031 1.00 35.19 C
ATOM 10 O3' A B 623 45.033 129.438 83.315 1.00 32.93 O
ATOM 11 C2' A B 623 43.574 127.770 84.311 1.00 36.05 C
ATOM 12 O2' A B 623 42.816 127.921 83.135 1.00 36.49 O
ATOM 13 C1' A B 623 43.777 126.276 84.571 1.00 36.62 C
ATOM 14 N9 A B 623 44.076 125.925 85.958 1.00 36.63 N
ATOM 15 C8 A B 623 45.112 126.367 86.748 1.00 37.15 C
ATOM 16 N7 A B 623 45.149 125.811 87.936 1.00 36.95 N
ATOM 17 C5 A B 623 44.054 124.961 87.936 1.00 37.17 C
ATOM 18 C6 A B 623 43.542 124.088 88.898 1.00 35.95 C
ATOM 19 N6 A B 623 44.101 123.887 90.087 1.00 35.89 N
ATOM 20 N1 A B 623 42.422 123.403 88.585 1.00 36.70 N
ATOM 21 C2 A B 623 41.881 123.568 87.376 1.00 36.71 C
ATOM 22 N3 A B 623 42.279 124.342 86.380 1.00 36.68 N
ATOM 23 C4 A B 623 43.380 125.029 86.727 1.00 36.66 C
ATOM 24 P G B 624 45.719 130.733 83.977 1.00 33.86 P
ATOM 25 OP1 G B 624 46.106 131.672 82.902 1.00 32.92 O
ATOM 26 OP2 G B 624 46.758 130.259 84.937 1.00 33.94 O
ATOM 27 O5' G B 624 44.544 131.438 84.788 1.00 32.13 O
TER
Atoms:
OP1: (32.953,117.120,95.815)
OP2: (34.207,115.329,97.129)
C3': (35.437,117.833,92.542)
C1': (35.500,120.178,92.289)
C5': (35.818,118.126,95.111)
O4': (35.322,119.911,93.654)
C8: (37.915,120.471,92.996)
O2': (33.749,119.007,91.245)
C6: (39.525,122.039,90.337)
C5: (38.741,121.421,91.299)
C4: (37.414,121.209,91.000)
P: (34.154,116.686,96.555)
C4': (35.062,118.509,93.855)
C2': (35.126,118.917,91.524)
C2: (37.633,122.148,89.029)
N1: (38.935,122.420,89.187)
N3: (36.787,121.539,89.865)
N6: (40.825,122.254,90.503)
N7: (39.046,120.951,92.563)
N9: (36.881,120.598,92.103)
O5': (35.419,116.845,95.600)
O3': (34.595,116.701,92.291)
OP2: (34.207,115.329,97.129)
C3': (35.437,117.833,92.542)
C1': (35.500,120.178,92.289)
C5': (35.818,118.126,95.111)
O4': (35.322,119.911,93.654)
C8: (37.915,120.471,92.996)
O2': (33.749,119.007,91.245)
C6: (39.525,122.039,90.337)
C5: (38.741,121.421,91.299)
C4: (37.414,121.209,91.000)
P: (34.154,116.686,96.555)
C4': (35.062,118.509,93.855)
C2': (35.126,118.917,91.524)
C2: (37.633,122.148,89.029)
N1: (38.935,122.420,89.187)
N3: (36.787,121.539,89.865)
N6: (40.825,122.254,90.503)
N7: (39.046,120.951,92.563)
N9: (36.881,120.598,92.103)
O5': (35.419,116.845,95.600)
O3': (34.595,116.701,92.291)
OP1: (49.842,127.297,84.513)
OP2: (48.857,126.201,86.583)
C3': (44.998,128.212,84.031)
C1': (43.777,126.276,84.571)
C5': (47.023,126.840,83.288)
O4': (44.897,125.883,83.799)
C8: (45.112,126.367,86.748)
O2': (42.816,127.921,83.135)
C6: (43.542,124.088,88.898)
C5: (44.054,124.961,87.936)
C4: (43.380,125.029,86.727)
P: (48.889,126.345,85.121)
C4': (45.532,127.049,83.204)
C2': (43.574,127.770,84.311)
C2: (41.881,123.568,87.376)
N1: (42.422,123.403,88.585)
N3: (42.279,124.342,86.380)
N6: (44.101,123.887,90.087)
N7: (45.149,125.811,87.936)
N9: (44.076,125.925,85.958)
O5': (47.397,126.670,84.670)
O3': (45.033,129.438,83.315)
OP2: (48.857,126.201,86.583)
C3': (44.998,128.212,84.031)
C1': (43.777,126.276,84.571)
C5': (47.023,126.840,83.288)
O4': (44.897,125.883,83.799)
C8: (45.112,126.367,86.748)
O2': (42.816,127.921,83.135)
C6: (43.542,124.088,88.898)
C5: (44.054,124.961,87.936)
C4: (43.380,125.029,86.727)
P: (48.889,126.345,85.121)
C4': (45.532,127.049,83.204)
C2': (43.574,127.770,84.311)
C2: (41.881,123.568,87.376)
N1: (42.422,123.403,88.585)
N3: (42.279,124.342,86.380)
N6: (44.101,123.887,90.087)
N7: (45.149,125.811,87.936)
N9: (44.076,125.925,85.958)
O5': (47.397,126.670,84.670)
O3': (45.033,129.438,83.315)
Image (generated by PyMOL):