ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQM:0608:0623

Extra

PDB:
ATOM 1 O3' U A 607 34.142 116.620 97.498 1.00 44.20 O
ATOM 2 P A A 608 33.688 115.600 96.344 1.00 44.86 P
ATOM 3 OP1 A A 608 32.449 116.196 95.775 1.00 44.17 O
ATOM 4 OP2 A A 608 33.672 114.204 96.853 1.00 46.67 O
ATOM 5 O5' A A 608 34.836 115.657 95.240 1.00 45.21 O
ATOM 6 C5' A A 608 35.393 116.896 94.812 1.00 39.68 C
ATOM 7 C4' A A 608 34.695 117.389 93.572 1.00 37.62 C
ATOM 8 O4' A A 608 35.062 118.777 93.411 1.00 38.56 O
ATOM 9 C3' A A 608 35.023 116.723 92.233 1.00 37.49 C
ATOM 10 O3' A A 608 34.165 115.611 91.954 1.00 35.26 O
ATOM 11 C2' A A 608 34.752 117.857 91.252 1.00 37.40 C
ATOM 12 O2' A A 608 33.370 118.056 91.038 1.00 35.03 O
ATOM 13 C1' A A 608 35.249 119.070 92.043 1.00 37.30 C
ATOM 14 N9 A A 608 36.658 119.417 91.856 1.00 37.54 N
ATOM 15 C8 A A 608 37.690 119.172 92.729 1.00 36.67 C
ATOM 16 N7 A A 608 38.843 119.637 92.330 1.00 36.83 N
ATOM 17 C5 A A 608 38.560 120.215 91.102 1.00 38.52 C
ATOM 18 C6 A A 608 39.367 120.888 90.169 1.00 39.12 C
ATOM 19 N6 A A 608 40.667 121.095 90.345 1.00 36.16 N
ATOM 20 N1 A A 608 38.778 121.345 89.037 1.00 39.32 N
ATOM 21 C2 A A 608 37.466 121.133 88.869 1.00 38.68 C
ATOM 22 N3 A A 608 36.602 120.515 89.676 1.00 38.99 N
ATOM 23 C4 A A 608 37.220 120.076 90.790 1.00 38.20 C
ATOM 24 P C A 609 34.659 114.413 90.995 1.00 35.54 P
ATOM 25 OP1 C A 609 33.459 113.610 90.664 1.00 38.63 O
ATOM 26 OP2 C A 609 35.824 113.743 91.621 1.00 35.65 O
ATOM 27 O5' C A 609 35.142 115.123 89.649 1.00 37.03 O
TER

ATOM 1 O3' G B 622 48.732 123.923 84.265 1.00 38.78 O
ATOM 2 P A B 623 48.540 125.376 84.913 1.00 39.53 P
ATOM 3 OP1 A B 623 49.544 126.251 84.266 1.00 42.17 O
ATOM 4 OP2 A B 623 48.494 125.276 86.393 1.00 42.93 O
ATOM 5 O5' A B 623 47.094 125.832 84.457 1.00 42.26 O
ATOM 6 C5' A B 623 46.739 125.964 83.074 1.00 41.53 C
ATOM 7 C4' A B 623 45.246 126.089 82.973 1.00 42.07 C
ATOM 8 O4' A B 623 44.673 124.911 83.600 1.00 42.02 O
ATOM 9 C3' A B 623 44.681 127.255 83.773 1.00 41.50 C
ATOM 10 O3' A B 623 44.648 128.440 82.989 1.00 42.78 O
ATOM 11 C2' A B 623 43.287 126.770 84.129 1.00 41.97 C
ATOM 12 O2' A B 623 42.394 126.917 83.044 1.00 44.17 O
ATOM 13 C1' A B 623 43.542 125.280 84.367 1.00 41.61 C
ATOM 14 N9 A B 623 43.827 124.916 85.751 1.00 42.79 N
ATOM 15 C8 A B 623 44.853 125.361 86.544 1.00 43.36 C
ATOM 16 N7 A B 623 44.899 124.787 87.718 1.00 43.60 N
ATOM 17 C5 A B 623 43.817 123.918 87.706 1.00 42.60 C
ATOM 18 C6 A B 623 43.331 123.001 88.653 1.00 43.14 C
ATOM 19 N6 A B 623 43.893 122.802 89.849 1.00 40.82 N
ATOM 20 N1 A B 623 42.235 122.285 88.326 1.00 41.96 N
ATOM 21 C2 A B 623 41.671 122.488 87.135 1.00 43.15 C
ATOM 22 N3 A B 623 42.036 123.316 86.159 1.00 43.98 N
ATOM 23 C4 A B 623 43.134 124.006 86.510 1.00 43.01 C
ATOM 24 P G B 624 45.318 129.792 83.544 1.00 42.53 P
ATOM 25 OP1 G B 624 45.566 130.664 82.386 1.00 45.19 O
ATOM 26 OP2 G B 624 46.443 129.436 84.451 1.00 46.00 O
ATOM 27 O5' G B 624 44.168 130.484 84.397 1.00 42.94 O
TER

Atoms:
OP1: (32.449,116.196,95.775)
OP2: (33.672,114.204,96.853)
C3': (35.023,116.723,92.233)
C1': (35.249,119.070,92.043)
C5': (35.393,116.896,94.812)
O4': (35.062,118.777,93.411)
C8: (37.690,119.172,92.729)
O2': (33.370,118.056,91.038)
C6: (39.367,120.888,90.169)
C5: (38.560,120.215,91.102)
C4: (37.220,120.076,90.790)
P: (33.688,115.600,96.344)
C4': (34.695,117.389,93.572)
C2': (34.752,117.857,91.252)
C2: (37.466,121.133,88.869)
N1: (38.778,121.345,89.037)
N3: (36.602,120.515,89.676)
N6: (40.667,121.095,90.345)
N7: (38.843,119.637,92.330)
N9: (36.658,119.417,91.856)
O5': (34.836,115.657,95.240)
O3': (34.165,115.611,91.954)
OP1: (49.544,126.251,84.266)
OP2: (48.494,125.276,86.393)
C3': (44.681,127.255,83.773)
C1': (43.542,125.280,84.367)
C5': (46.739,125.964,83.074)
O4': (44.673,124.911,83.600)
C8: (44.853,125.361,86.544)
O2': (42.394,126.917,83.044)
C6: (43.331,123.001,88.653)
C5: (43.817,123.918,87.706)
C4: (43.134,124.006,86.510)
P: (48.540,125.376,84.913)
C4': (45.246,126.089,82.973)
C2': (43.287,126.770,84.129)
C2: (41.671,122.488,87.135)
N1: (42.235,122.285,88.326)
N3: (42.036,123.316,86.159)
N6: (43.893,122.802,89.849)
N7: (44.899,124.787,87.718)
N9: (43.827,124.916,85.751)
O5': (47.094,125.832,84.457)
O3': (44.648,128.440,82.989)
Image (generated by PyMOL):
PyMOL image
show in jmol