ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQN:0608:0623

Extra

PDB:
ATOM 1 O3' U A 607 34.197 116.812 97.576 1.00 41.68 O
ATOM 2 P A A 608 33.786 115.788 96.410 1.00 42.08 P
ATOM 3 OP1 A A 608 32.557 116.343 95.790 1.00 41.91 O
ATOM 4 OP2 A A 608 33.792 114.399 96.914 1.00 42.45 O
ATOM 5 O5' A A 608 34.960 115.884 95.335 1.00 42.42 O
ATOM 6 C5' A A 608 35.488 117.141 94.921 1.00 35.96 C
ATOM 7 C4' A A 608 34.784 117.630 93.680 1.00 35.63 C
ATOM 8 O4' A A 608 35.147 119.018 93.503 1.00 35.90 O
ATOM 9 C3' A A 608 35.099 116.958 92.342 1.00 34.18 C
ATOM 10 O3' A A 608 34.232 115.855 92.073 1.00 35.21 O
ATOM 11 C2' A A 608 34.803 118.079 91.360 1.00 35.86 C
ATOM 12 O2' A A 608 33.408 118.259 91.176 1.00 32.72 O
ATOM 13 C1' A A 608 35.319 119.296 92.129 1.00 35.93 C
ATOM 14 N9 A A 608 36.727 119.640 91.920 1.00 36.50 N
ATOM 15 C8 A A 608 37.764 119.444 92.793 1.00 35.44 C
ATOM 16 N7 A A 608 38.908 119.909 92.368 1.00 37.09 N
ATOM 17 C5 A A 608 38.613 120.434 91.124 1.00 37.53 C
ATOM 18 C6 A A 608 39.402 121.085 90.166 1.00 39.54 C
ATOM 19 N6 A A 608 40.699 121.333 90.330 1.00 38.83 N
ATOM 20 N1 A A 608 38.803 121.486 89.021 1.00 39.06 N
ATOM 21 C2 A A 608 37.499 121.246 88.869 1.00 38.83 C
ATOM 22 N3 A A 608 36.650 120.646 89.701 1.00 38.86 N
ATOM 23 C4 A A 608 37.276 120.262 90.825 1.00 37.99 C
ATOM 24 P C A 609 34.726 114.638 91.140 1.00 34.37 P
ATOM 25 OP1 C A 609 33.534 113.817 90.818 1.00 36.78 O
ATOM 26 OP2 C A 609 35.897 113.991 91.777 1.00 35.80 O
ATOM 27 O5' C A 609 35.203 115.328 89.785 1.00 35.06 O
TER

ATOM 1 O3' G B 622 48.835 124.060 84.357 1.00 37.78 O
ATOM 2 P A B 623 48.576 125.525 84.966 1.00 39.06 P
ATOM 3 OP1 A B 623 49.550 126.439 84.320 1.00 43.48 O
ATOM 4 OP2 A B 623 48.498 125.460 86.450 1.00 43.03 O
ATOM 5 O5' A B 623 47.118 125.917 84.484 1.00 40.40 O
ATOM 6 C5' A B 623 46.795 126.131 83.100 1.00 40.07 C
ATOM 7 C4' A B 623 45.303 126.290 82.976 1.00 39.16 C
ATOM 8 O4' A B 623 44.705 125.109 83.569 1.00 38.94 O
ATOM 9 C3' A B 623 44.745 127.451 83.792 1.00 38.62 C
ATOM 10 O3' A B 623 44.712 128.645 83.023 1.00 38.42 O
ATOM 11 C2' A B 623 43.348 126.971 84.147 1.00 37.58 C
ATOM 12 O2' A B 623 42.454 127.130 83.066 1.00 41.11 O
ATOM 13 C1' A B 623 43.596 125.479 84.367 1.00 38.31 C
ATOM 14 N9 A B 623 43.906 125.107 85.745 1.00 38.83 N
ATOM 15 C8 A B 623 44.941 125.552 86.529 1.00 38.20 C
ATOM 16 N7 A B 623 44.983 124.997 87.714 1.00 37.19 N
ATOM 17 C5 A B 623 43.898 124.135 87.716 1.00 37.55 C
ATOM 18 C6 A B 623 43.399 123.247 88.681 1.00 38.84 C
ATOM 19 N6 A B 623 43.956 123.063 89.882 1.00 38.38 N
ATOM 20 N1 A B 623 42.296 122.539 88.368 1.00 38.22 N
ATOM 21 C2 A B 623 41.742 122.716 87.169 1.00 37.99 C
ATOM 22 N3 A B 623 42.121 123.513 86.174 1.00 38.71 N
ATOM 23 C4 A B 623 43.219 124.202 86.514 1.00 38.11 C
ATOM 24 P G B 624 45.371 129.990 83.596 1.00 39.67 P
ATOM 25 OP1 G B 624 45.585 130.912 82.462 1.00 41.22 O
ATOM 26 OP2 G B 624 46.513 129.614 84.464 1.00 43.76 O
ATOM 27 O5' G B 624 44.227 130.665 84.472 1.00 39.22 O
TER

Atoms:
OP1: (32.557,116.343,95.790)
OP2: (33.792,114.399,96.914)
C3': (35.099,116.958,92.342)
C1': (35.319,119.296,92.129)
C5': (35.488,117.141,94.921)
O4': (35.147,119.018,93.503)
C8: (37.764,119.444,92.793)
O2': (33.408,118.259,91.176)
C6: (39.402,121.085,90.166)
C5: (38.613,120.434,91.124)
C4: (37.276,120.262,90.825)
P: (33.786,115.788,96.410)
C4': (34.784,117.630,93.680)
C2': (34.803,118.079,91.360)
C2: (37.499,121.246,88.869)
N1: (38.803,121.486,89.021)
N3: (36.650,120.646,89.701)
N6: (40.699,121.333,90.330)
N7: (38.908,119.909,92.368)
N9: (36.727,119.640,91.920)
O5': (34.960,115.884,95.335)
O3': (34.232,115.855,92.073)
OP1: (49.550,126.439,84.320)
OP2: (48.498,125.460,86.450)
C3': (44.745,127.451,83.792)
C1': (43.596,125.479,84.367)
C5': (46.795,126.131,83.100)
O4': (44.705,125.109,83.569)
C8: (44.941,125.552,86.529)
O2': (42.454,127.130,83.066)
C6: (43.399,123.247,88.681)
C5: (43.898,124.135,87.716)
C4: (43.219,124.202,86.514)
P: (48.576,125.525,84.966)
C4': (45.303,126.290,82.976)
C2': (43.348,126.971,84.147)
C2: (41.742,122.716,87.169)
N1: (42.296,122.539,88.368)
N3: (42.121,123.513,86.174)
N6: (43.956,123.063,89.882)
N7: (44.983,124.997,87.714)
N9: (43.906,125.107,85.745)
O5': (47.118,125.917,84.484)
O3': (44.712,128.645,83.023)
Image (generated by PyMOL):
PyMOL image
show in jmol