Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01870:01885
Extra
PDB:
ATOM 1 O3' C A1869 104.229 93.660 40.468 1.00 64.34 O
ATOM 2 P A A1870 104.409 92.197 39.824 1.00 66.58 P
ATOM 3 OP1 A A1870 103.713 92.210 38.512 1.00 66.97 O
ATOM 4 OP2 A A1870 104.060 91.159 40.832 1.00 66.32 O
ATOM 5 O5' A A1870 105.970 92.099 39.547 1.00 65.63 O
ATOM 6 C5' A A1870 106.591 92.958 38.588 1.00 65.12 C
ATOM 7 C4' A A1870 108.084 92.850 38.701 1.00 66.23 C
ATOM 8 O4' A A1870 108.488 93.295 40.023 1.00 65.11 O
ATOM 9 C3' A A1870 108.629 91.436 38.622 1.00 67.81 C
ATOM 10 O3' A A1870 108.725 90.951 37.286 1.00 70.77 O
ATOM 11 C2' A A1870 109.973 91.584 39.319 1.00 66.96 C
ATOM 12 O2' A A1870 110.954 92.182 38.494 1.00 67.28 O
ATOM 13 C1' A A1870 109.602 92.533 40.462 1.00 65.24 C
ATOM 14 N9 A A1870 109.207 91.796 41.661 1.00 64.24 N
ATOM 15 C8 A A1870 107.952 91.348 42.005 1.00 64.47 C
ATOM 16 N7 A A1870 107.924 90.665 43.125 1.00 63.72 N
ATOM 17 C5 A A1870 109.244 90.673 43.552 1.00 63.60 C
ATOM 18 C6 A A1870 109.874 90.116 44.674 1.00 64.72 C
ATOM 19 N6 A A1870 109.235 89.392 45.595 1.00 65.32 N
ATOM 20 N1 A A1870 111.203 90.325 44.817 1.00 65.11 N
ATOM 21 C2 A A1870 111.844 91.036 43.882 1.00 63.45 C
ATOM 22 N3 A A1870 111.364 91.600 42.777 1.00 63.23 N
ATOM 23 C4 A A1870 110.042 91.380 42.669 1.00 63.50 C
ATOM 24 P C A1871 108.399 89.403 36.980 1.00 72.71 P
ATOM 25 OP1 C A1871 108.639 89.167 35.529 1.00 71.83 O
ATOM 26 OP2 C A1871 107.070 89.085 37.561 1.00 72.84 O
ATOM 27 O5' C A1871 109.506 88.615 37.814 1.00 71.07 O
TER
ATOM 1 O3' G B1884 111.621 79.665 51.245 1.00 79.57 O
ATOM 2 P A B1885 112.427 80.747 52.124 1.00 79.67 P
ATOM 3 OP1 A B1885 113.429 80.001 52.934 1.00 78.86 O
ATOM 4 OP2 A B1885 111.447 81.634 52.809 1.00 78.40 O
ATOM 5 O5' A B1885 113.215 81.610 51.040 1.00 77.73 O
ATOM 6 C5' A B1885 114.316 81.045 50.303 1.00 77.30 C
ATOM 7 C4' A B1885 114.786 82.011 49.243 1.00 77.42 C
ATOM 8 O4' A B1885 113.712 82.253 48.297 1.00 78.09 O
ATOM 9 C3' A B1885 115.159 83.395 49.742 1.00 77.27 C
ATOM 10 O3' A B1885 116.485 83.423 50.242 1.00 78.54 O
ATOM 11 C2' A B1885 114.989 84.246 48.493 1.00 77.44 C
ATOM 12 O2' A B1885 116.078 84.130 47.601 1.00 77.19 O
ATOM 13 C1' A B1885 113.748 83.606 47.866 1.00 77.82 C
ATOM 14 N9 A B1885 112.503 84.252 48.288 1.00 77.60 N
ATOM 15 C8 A B1885 111.584 83.798 49.204 1.00 77.27 C
ATOM 16 N7 A B1885 110.574 84.610 49.388 1.00 76.88 N
ATOM 17 C5 A B1885 110.841 85.671 48.535 1.00 76.71 C
ATOM 18 C6 A B1885 110.148 86.861 48.266 1.00 76.22 C
ATOM 19 N6 A B1885 109.005 87.198 48.860 1.00 76.26 N
ATOM 20 N1 A B1885 110.678 87.705 47.356 1.00 76.82 N
ATOM 21 C2 A B1885 111.831 87.369 46.766 1.00 78.11 C
ATOM 22 N3 A B1885 112.580 86.280 46.938 1.00 78.44 N
ATOM 23 C4 A B1885 112.022 85.461 47.847 1.00 77.25 C
ATOM 24 P C B1886 116.868 84.445 51.421 1.00 80.43 P
ATOM 25 OP1 C B1886 118.317 84.278 51.717 1.00 80.69 O
ATOM 26 OP2 C B1886 115.871 84.286 52.515 1.00 79.00 O
ATOM 27 O5' C B1886 116.679 85.880 50.760 1.00 79.01 O
TER
ATOM 2 P A A1870 104.409 92.197 39.824 1.00 66.58 P
ATOM 3 OP1 A A1870 103.713 92.210 38.512 1.00 66.97 O
ATOM 4 OP2 A A1870 104.060 91.159 40.832 1.00 66.32 O
ATOM 5 O5' A A1870 105.970 92.099 39.547 1.00 65.63 O
ATOM 6 C5' A A1870 106.591 92.958 38.588 1.00 65.12 C
ATOM 7 C4' A A1870 108.084 92.850 38.701 1.00 66.23 C
ATOM 8 O4' A A1870 108.488 93.295 40.023 1.00 65.11 O
ATOM 9 C3' A A1870 108.629 91.436 38.622 1.00 67.81 C
ATOM 10 O3' A A1870 108.725 90.951 37.286 1.00 70.77 O
ATOM 11 C2' A A1870 109.973 91.584 39.319 1.00 66.96 C
ATOM 12 O2' A A1870 110.954 92.182 38.494 1.00 67.28 O
ATOM 13 C1' A A1870 109.602 92.533 40.462 1.00 65.24 C
ATOM 14 N9 A A1870 109.207 91.796 41.661 1.00 64.24 N
ATOM 15 C8 A A1870 107.952 91.348 42.005 1.00 64.47 C
ATOM 16 N7 A A1870 107.924 90.665 43.125 1.00 63.72 N
ATOM 17 C5 A A1870 109.244 90.673 43.552 1.00 63.60 C
ATOM 18 C6 A A1870 109.874 90.116 44.674 1.00 64.72 C
ATOM 19 N6 A A1870 109.235 89.392 45.595 1.00 65.32 N
ATOM 20 N1 A A1870 111.203 90.325 44.817 1.00 65.11 N
ATOM 21 C2 A A1870 111.844 91.036 43.882 1.00 63.45 C
ATOM 22 N3 A A1870 111.364 91.600 42.777 1.00 63.23 N
ATOM 23 C4 A A1870 110.042 91.380 42.669 1.00 63.50 C
ATOM 24 P C A1871 108.399 89.403 36.980 1.00 72.71 P
ATOM 25 OP1 C A1871 108.639 89.167 35.529 1.00 71.83 O
ATOM 26 OP2 C A1871 107.070 89.085 37.561 1.00 72.84 O
ATOM 27 O5' C A1871 109.506 88.615 37.814 1.00 71.07 O
TER
ATOM 1 O3' G B1884 111.621 79.665 51.245 1.00 79.57 O
ATOM 2 P A B1885 112.427 80.747 52.124 1.00 79.67 P
ATOM 3 OP1 A B1885 113.429 80.001 52.934 1.00 78.86 O
ATOM 4 OP2 A B1885 111.447 81.634 52.809 1.00 78.40 O
ATOM 5 O5' A B1885 113.215 81.610 51.040 1.00 77.73 O
ATOM 6 C5' A B1885 114.316 81.045 50.303 1.00 77.30 C
ATOM 7 C4' A B1885 114.786 82.011 49.243 1.00 77.42 C
ATOM 8 O4' A B1885 113.712 82.253 48.297 1.00 78.09 O
ATOM 9 C3' A B1885 115.159 83.395 49.742 1.00 77.27 C
ATOM 10 O3' A B1885 116.485 83.423 50.242 1.00 78.54 O
ATOM 11 C2' A B1885 114.989 84.246 48.493 1.00 77.44 C
ATOM 12 O2' A B1885 116.078 84.130 47.601 1.00 77.19 O
ATOM 13 C1' A B1885 113.748 83.606 47.866 1.00 77.82 C
ATOM 14 N9 A B1885 112.503 84.252 48.288 1.00 77.60 N
ATOM 15 C8 A B1885 111.584 83.798 49.204 1.00 77.27 C
ATOM 16 N7 A B1885 110.574 84.610 49.388 1.00 76.88 N
ATOM 17 C5 A B1885 110.841 85.671 48.535 1.00 76.71 C
ATOM 18 C6 A B1885 110.148 86.861 48.266 1.00 76.22 C
ATOM 19 N6 A B1885 109.005 87.198 48.860 1.00 76.26 N
ATOM 20 N1 A B1885 110.678 87.705 47.356 1.00 76.82 N
ATOM 21 C2 A B1885 111.831 87.369 46.766 1.00 78.11 C
ATOM 22 N3 A B1885 112.580 86.280 46.938 1.00 78.44 N
ATOM 23 C4 A B1885 112.022 85.461 47.847 1.00 77.25 C
ATOM 24 P C B1886 116.868 84.445 51.421 1.00 80.43 P
ATOM 25 OP1 C B1886 118.317 84.278 51.717 1.00 80.69 O
ATOM 26 OP2 C B1886 115.871 84.286 52.515 1.00 79.00 O
ATOM 27 O5' C B1886 116.679 85.880 50.760 1.00 79.01 O
TER
Atoms:
OP1: (103.713,92.210,38.512)
OP2: (104.060,91.159,40.832)
C3': (108.629,91.436,38.622)
C1': (109.602,92.533,40.462)
C5': (106.591,92.958,38.588)
O4': (108.488,93.295,40.023)
C8: (107.952,91.348,42.005)
O2': (110.954,92.182,38.494)
C6: (109.874,90.116,44.674)
C5: (109.244,90.673,43.552)
C4: (110.042,91.380,42.669)
P: (104.409,92.197,39.824)
C4': (108.084,92.850,38.701)
C2': (109.973,91.584,39.319)
C2: (111.844,91.036,43.882)
N1: (111.203,90.325,44.817)
N3: (111.364,91.600,42.777)
N6: (109.235,89.392,45.595)
N7: (107.924,90.665,43.125)
N9: (109.207,91.796,41.661)
O5': (105.970,92.099,39.547)
O3': (108.725,90.951,37.286)
OP2: (104.060,91.159,40.832)
C3': (108.629,91.436,38.622)
C1': (109.602,92.533,40.462)
C5': (106.591,92.958,38.588)
O4': (108.488,93.295,40.023)
C8: (107.952,91.348,42.005)
O2': (110.954,92.182,38.494)
C6: (109.874,90.116,44.674)
C5: (109.244,90.673,43.552)
C4: (110.042,91.380,42.669)
P: (104.409,92.197,39.824)
C4': (108.084,92.850,38.701)
C2': (109.973,91.584,39.319)
C2: (111.844,91.036,43.882)
N1: (111.203,90.325,44.817)
N3: (111.364,91.600,42.777)
N6: (109.235,89.392,45.595)
N7: (107.924,90.665,43.125)
N9: (109.207,91.796,41.661)
O5': (105.970,92.099,39.547)
O3': (108.725,90.951,37.286)
OP1: (113.429,80.001,52.934)
OP2: (111.447,81.634,52.809)
C3': (115.159,83.395,49.742)
C1': (113.748,83.606,47.866)
C5': (114.316,81.045,50.303)
O4': (113.712,82.253,48.297)
C8: (111.584,83.798,49.204)
O2': (116.078,84.130,47.601)
C6: (110.148,86.861,48.266)
C5: (110.841,85.671,48.535)
C4: (112.022,85.461,47.847)
P: (112.427,80.747,52.124)
C4': (114.786,82.011,49.243)
C2': (114.989,84.246,48.493)
C2: (111.831,87.369,46.766)
N1: (110.678,87.705,47.356)
N3: (112.580,86.280,46.938)
N6: (109.005,87.198,48.860)
N7: (110.574,84.610,49.388)
N9: (112.503,84.252,48.288)
O5': (113.215,81.610,51.040)
O3': (116.485,83.423,50.242)
OP2: (111.447,81.634,52.809)
C3': (115.159,83.395,49.742)
C1': (113.748,83.606,47.866)
C5': (114.316,81.045,50.303)
O4': (113.712,82.253,48.297)
C8: (111.584,83.798,49.204)
O2': (116.078,84.130,47.601)
C6: (110.148,86.861,48.266)
C5: (110.841,85.671,48.535)
C4: (112.022,85.461,47.847)
P: (112.427,80.747,52.124)
C4': (114.786,82.011,49.243)
C2': (114.989,84.246,48.493)
C2: (111.831,87.369,46.766)
N1: (110.678,87.705,47.356)
N3: (112.580,86.280,46.938)
N6: (109.005,87.198,48.860)
N7: (110.574,84.610,49.388)
N9: (112.503,84.252,48.288)
O5': (113.215,81.610,51.040)
O3': (116.485,83.423,50.242)
Image (generated by PyMOL):