Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0608:0623
Extra
PDB:
ATOM 1 O3' U A 607 34.249 117.816 97.441 1.00 32.92 O
ATOM 2 P A A 608 33.845 116.784 96.286 1.00 32.45 P
ATOM 3 OP1 A A 608 32.619 117.305 95.643 1.00 33.96 O
ATOM 4 OP2 A A 608 33.858 115.402 96.817 1.00 34.74 O
ATOM 5 O5' A A 608 35.036 116.875 95.237 1.00 33.95 O
ATOM 6 C5' A A 608 35.554 118.131 94.828 1.00 28.21 C
ATOM 7 C4' A A 608 34.870 118.593 93.568 1.00 27.87 C
ATOM 8 O4' A A 608 35.254 119.967 93.366 1.00 28.52 O
ATOM 9 C3' A A 608 35.216 117.891 92.259 1.00 26.13 C
ATOM 10 O3' A A 608 34.378 116.770 91.996 1.00 24.22 O
ATOM 11 C2' A A 608 34.937 118.983 91.243 1.00 28.00 C
ATOM 12 O2' A A 608 33.552 119.143 91.020 1.00 25.59 O
ATOM 13 C1' A A 608 35.427 120.217 91.992 1.00 28.21 C
ATOM 14 N9 A A 608 36.828 120.571 91.783 1.00 29.37 N
ATOM 15 C8 A A 608 37.873 120.414 92.657 1.00 29.78 C
ATOM 16 N7 A A 608 39.008 120.885 92.211 1.00 31.51 N
ATOM 17 C5 A A 608 38.692 121.373 90.953 1.00 32.13 C
ATOM 18 C6 A A 608 39.458 122.008 89.973 1.00 33.01 C
ATOM 19 N6 A A 608 40.749 122.293 90.123 1.00 35.39 N
ATOM 20 N1 A A 608 38.846 122.357 88.823 1.00 33.27 N
ATOM 21 C2 A A 608 37.546 122.093 88.688 1.00 31.69 C
ATOM 22 N3 A A 608 36.714 121.514 89.541 1.00 31.55 N
ATOM 23 C4 A A 608 37.358 121.172 90.670 1.00 31.38 C
ATOM 24 P C A 609 34.886 115.590 91.020 1.00 26.74 P
ATOM 25 OP1 C A 609 33.717 114.728 90.690 1.00 27.12 O
ATOM 26 OP2 C A 609 36.076 114.973 91.639 1.00 26.85 O
ATOM 27 O5' C A 609 35.336 116.328 89.680 1.00 25.19 O
TER
ATOM 1 O3' G B 622 48.985 124.898 84.147 1.00 33.09 O
ATOM 2 P A B 623 48.830 126.376 84.744 1.00 32.35 P
ATOM 3 OP1 A B 623 49.782 127.234 84.008 1.00 34.32 O
ATOM 4 OP2 A B 623 48.864 126.331 86.228 1.00 33.48 O
ATOM 5 O5' A B 623 47.362 126.820 84.337 1.00 35.30 O
ATOM 6 C5' A B 623 46.972 126.979 82.962 1.00 31.69 C
ATOM 7 C4' A B 623 45.476 127.083 82.887 1.00 29.48 C
ATOM 8 O4' A B 623 44.930 125.887 83.488 1.00 29.07 O
ATOM 9 C3' A B 623 44.882 128.219 83.705 1.00 30.04 C
ATOM 10 O3' A B 623 44.824 129.422 82.950 1.00 30.00 O
ATOM 11 C2' A B 623 43.497 127.697 84.028 1.00 31.08 C
ATOM 12 O2' A B 623 42.637 127.842 82.919 1.00 35.11 O
ATOM 13 C1' A B 623 43.786 126.211 84.251 1.00 32.13 C
ATOM 14 N9 A B 623 44.070 125.847 85.639 1.00 36.18 N
ATOM 15 C8 A B 623 45.129 126.251 86.419 1.00 37.20 C
ATOM 16 N7 A B 623 45.127 125.735 87.623 1.00 37.42 N
ATOM 17 C5 A B 623 43.992 124.938 87.638 1.00 37.80 C
ATOM 18 C6 A B 623 43.433 124.119 88.625 1.00 38.56 C
ATOM 19 N6 A B 623 43.968 123.950 89.832 1.00 37.71 N
ATOM 20 N1 A B 623 42.290 123.466 88.325 1.00 40.46 N
ATOM 21 C2 A B 623 41.759 123.629 87.112 1.00 39.04 C
ATOM 22 N3 A B 623 42.194 124.368 86.096 1.00 39.22 N
ATOM 23 C4 A B 623 43.327 125.005 86.427 1.00 36.73 C
ATOM 24 P G B 624 45.485 130.765 83.530 1.00 32.12 P
ATOM 25 OP1 G B 624 45.747 131.639 82.367 1.00 29.96 O
ATOM 26 OP2 G B 624 46.607 130.405 84.450 1.00 31.89 O
ATOM 27 O5' G B 624 44.328 131.436 84.395 1.00 29.97 O
TER
ATOM 2 P A A 608 33.845 116.784 96.286 1.00 32.45 P
ATOM 3 OP1 A A 608 32.619 117.305 95.643 1.00 33.96 O
ATOM 4 OP2 A A 608 33.858 115.402 96.817 1.00 34.74 O
ATOM 5 O5' A A 608 35.036 116.875 95.237 1.00 33.95 O
ATOM 6 C5' A A 608 35.554 118.131 94.828 1.00 28.21 C
ATOM 7 C4' A A 608 34.870 118.593 93.568 1.00 27.87 C
ATOM 8 O4' A A 608 35.254 119.967 93.366 1.00 28.52 O
ATOM 9 C3' A A 608 35.216 117.891 92.259 1.00 26.13 C
ATOM 10 O3' A A 608 34.378 116.770 91.996 1.00 24.22 O
ATOM 11 C2' A A 608 34.937 118.983 91.243 1.00 28.00 C
ATOM 12 O2' A A 608 33.552 119.143 91.020 1.00 25.59 O
ATOM 13 C1' A A 608 35.427 120.217 91.992 1.00 28.21 C
ATOM 14 N9 A A 608 36.828 120.571 91.783 1.00 29.37 N
ATOM 15 C8 A A 608 37.873 120.414 92.657 1.00 29.78 C
ATOM 16 N7 A A 608 39.008 120.885 92.211 1.00 31.51 N
ATOM 17 C5 A A 608 38.692 121.373 90.953 1.00 32.13 C
ATOM 18 C6 A A 608 39.458 122.008 89.973 1.00 33.01 C
ATOM 19 N6 A A 608 40.749 122.293 90.123 1.00 35.39 N
ATOM 20 N1 A A 608 38.846 122.357 88.823 1.00 33.27 N
ATOM 21 C2 A A 608 37.546 122.093 88.688 1.00 31.69 C
ATOM 22 N3 A A 608 36.714 121.514 89.541 1.00 31.55 N
ATOM 23 C4 A A 608 37.358 121.172 90.670 1.00 31.38 C
ATOM 24 P C A 609 34.886 115.590 91.020 1.00 26.74 P
ATOM 25 OP1 C A 609 33.717 114.728 90.690 1.00 27.12 O
ATOM 26 OP2 C A 609 36.076 114.973 91.639 1.00 26.85 O
ATOM 27 O5' C A 609 35.336 116.328 89.680 1.00 25.19 O
TER
ATOM 1 O3' G B 622 48.985 124.898 84.147 1.00 33.09 O
ATOM 2 P A B 623 48.830 126.376 84.744 1.00 32.35 P
ATOM 3 OP1 A B 623 49.782 127.234 84.008 1.00 34.32 O
ATOM 4 OP2 A B 623 48.864 126.331 86.228 1.00 33.48 O
ATOM 5 O5' A B 623 47.362 126.820 84.337 1.00 35.30 O
ATOM 6 C5' A B 623 46.972 126.979 82.962 1.00 31.69 C
ATOM 7 C4' A B 623 45.476 127.083 82.887 1.00 29.48 C
ATOM 8 O4' A B 623 44.930 125.887 83.488 1.00 29.07 O
ATOM 9 C3' A B 623 44.882 128.219 83.705 1.00 30.04 C
ATOM 10 O3' A B 623 44.824 129.422 82.950 1.00 30.00 O
ATOM 11 C2' A B 623 43.497 127.697 84.028 1.00 31.08 C
ATOM 12 O2' A B 623 42.637 127.842 82.919 1.00 35.11 O
ATOM 13 C1' A B 623 43.786 126.211 84.251 1.00 32.13 C
ATOM 14 N9 A B 623 44.070 125.847 85.639 1.00 36.18 N
ATOM 15 C8 A B 623 45.129 126.251 86.419 1.00 37.20 C
ATOM 16 N7 A B 623 45.127 125.735 87.623 1.00 37.42 N
ATOM 17 C5 A B 623 43.992 124.938 87.638 1.00 37.80 C
ATOM 18 C6 A B 623 43.433 124.119 88.625 1.00 38.56 C
ATOM 19 N6 A B 623 43.968 123.950 89.832 1.00 37.71 N
ATOM 20 N1 A B 623 42.290 123.466 88.325 1.00 40.46 N
ATOM 21 C2 A B 623 41.759 123.629 87.112 1.00 39.04 C
ATOM 22 N3 A B 623 42.194 124.368 86.096 1.00 39.22 N
ATOM 23 C4 A B 623 43.327 125.005 86.427 1.00 36.73 C
ATOM 24 P G B 624 45.485 130.765 83.530 1.00 32.12 P
ATOM 25 OP1 G B 624 45.747 131.639 82.367 1.00 29.96 O
ATOM 26 OP2 G B 624 46.607 130.405 84.450 1.00 31.89 O
ATOM 27 O5' G B 624 44.328 131.436 84.395 1.00 29.97 O
TER
Atoms:
OP1: (32.619,117.305,95.643)
OP2: (33.858,115.402,96.817)
C3': (35.216,117.891,92.259)
C1': (35.427,120.217,91.992)
C5': (35.554,118.131,94.828)
O4': (35.254,119.967,93.366)
C8: (37.873,120.414,92.657)
O2': (33.552,119.143,91.020)
C6: (39.458,122.008,89.973)
C5: (38.692,121.373,90.953)
C4: (37.358,121.172,90.670)
P: (33.845,116.784,96.286)
C4': (34.870,118.593,93.568)
C2': (34.937,118.983,91.243)
C2: (37.546,122.093,88.688)
N1: (38.846,122.357,88.823)
N3: (36.714,121.514,89.541)
N6: (40.749,122.293,90.123)
N7: (39.008,120.885,92.211)
N9: (36.828,120.571,91.783)
O5': (35.036,116.875,95.237)
O3': (34.378,116.770,91.996)
OP2: (33.858,115.402,96.817)
C3': (35.216,117.891,92.259)
C1': (35.427,120.217,91.992)
C5': (35.554,118.131,94.828)
O4': (35.254,119.967,93.366)
C8: (37.873,120.414,92.657)
O2': (33.552,119.143,91.020)
C6: (39.458,122.008,89.973)
C5: (38.692,121.373,90.953)
C4: (37.358,121.172,90.670)
P: (33.845,116.784,96.286)
C4': (34.870,118.593,93.568)
C2': (34.937,118.983,91.243)
C2: (37.546,122.093,88.688)
N1: (38.846,122.357,88.823)
N3: (36.714,121.514,89.541)
N6: (40.749,122.293,90.123)
N7: (39.008,120.885,92.211)
N9: (36.828,120.571,91.783)
O5': (35.036,116.875,95.237)
O3': (34.378,116.770,91.996)
OP1: (49.782,127.234,84.008)
OP2: (48.864,126.331,86.228)
C3': (44.882,128.219,83.705)
C1': (43.786,126.211,84.251)
C5': (46.972,126.979,82.962)
O4': (44.930,125.887,83.488)
C8: (45.129,126.251,86.419)
O2': (42.637,127.842,82.919)
C6: (43.433,124.119,88.625)
C5: (43.992,124.938,87.638)
C4: (43.327,125.005,86.427)
P: (48.830,126.376,84.744)
C4': (45.476,127.083,82.887)
C2': (43.497,127.697,84.028)
C2: (41.759,123.629,87.112)
N1: (42.290,123.466,88.325)
N3: (42.194,124.368,86.096)
N6: (43.968,123.950,89.832)
N7: (45.127,125.735,87.623)
N9: (44.070,125.847,85.639)
O5': (47.362,126.820,84.337)
O3': (44.824,129.422,82.950)
OP2: (48.864,126.331,86.228)
C3': (44.882,128.219,83.705)
C1': (43.786,126.211,84.251)
C5': (46.972,126.979,82.962)
O4': (44.930,125.887,83.488)
C8: (45.129,126.251,86.419)
O2': (42.637,127.842,82.919)
C6: (43.433,124.119,88.625)
C5: (43.992,124.938,87.638)
C4: (43.327,125.005,86.427)
P: (48.830,126.376,84.744)
C4': (45.476,127.083,82.887)
C2': (43.497,127.697,84.028)
C2: (41.759,123.629,87.112)
N1: (42.290,123.466,88.325)
N3: (42.194,124.368,86.096)
N6: (43.968,123.950,89.832)
N7: (45.127,125.735,87.623)
N9: (44.070,125.847,85.639)
O5': (47.362,126.820,84.337)
O3': (44.824,129.422,82.950)
Image (generated by PyMOL):