Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0608:0623
Extra
PDB:
ATOM 1 O3' U A 607 34.445 117.648 97.357 1.00 32.04 O
ATOM 2 P A A 608 34.002 116.646 96.188 1.00 32.63 P
ATOM 3 OP1 A A 608 32.828 117.253 95.521 1.00 32.61 O
ATOM 4 OP2 A A 608 33.904 115.268 96.723 1.00 34.33 O
ATOM 5 O5' A A 608 35.217 116.681 95.163 1.00 32.00 O
ATOM 6 C5' A A 608 35.744 117.919 94.704 1.00 26.40 C
ATOM 7 C4' A A 608 35.015 118.373 93.468 1.00 25.40 C
ATOM 8 O4' A A 608 35.352 119.759 93.257 1.00 26.76 O
ATOM 9 C3' A A 608 35.341 117.676 92.154 1.00 25.71 C
ATOM 10 O3' A A 608 34.508 116.546 91.910 1.00 25.65 O
ATOM 11 C2' A A 608 35.043 118.765 91.140 1.00 26.49 C
ATOM 12 O2' A A 608 33.657 118.912 90.929 1.00 25.46 O
ATOM 13 C1' A A 608 35.533 120.003 91.883 1.00 28.04 C
ATOM 14 N9 A A 608 36.943 120.327 91.678 1.00 31.10 N
ATOM 15 C8 A A 608 37.991 120.083 92.533 1.00 31.45 C
ATOM 16 N7 A A 608 39.138 120.544 92.109 1.00 33.35 N
ATOM 17 C5 A A 608 38.829 121.120 90.884 1.00 33.99 C
ATOM 18 C6 A A 608 39.611 121.785 89.941 1.00 33.85 C
ATOM 19 N6 A A 608 40.910 122.009 90.105 1.00 37.85 N
ATOM 20 N1 A A 608 39.009 122.224 88.817 1.00 33.11 N
ATOM 21 C2 A A 608 37.698 122.010 88.670 1.00 33.77 C
ATOM 22 N3 A A 608 36.849 121.406 89.491 1.00 33.34 N
ATOM 23 C4 A A 608 37.486 120.977 90.597 1.00 33.49 C
ATOM 24 P C A 609 35.016 115.363 90.942 1.00 26.85 P
ATOM 25 OP1 C A 609 33.846 114.494 90.661 1.00 28.34 O
ATOM 26 OP2 C A 609 36.234 114.766 91.526 1.00 29.90 O
ATOM 27 O5' C A 609 35.450 116.083 89.589 1.00 27.06 O
TER
ATOM 1 O3' G B 622 49.138 124.714 84.180 1.00 32.70 O
ATOM 2 P A B 623 48.933 126.195 84.759 1.00 35.42 P
ATOM 3 OP1 A B 623 49.838 127.083 84.005 1.00 35.01 O
ATOM 4 OP2 A B 623 48.983 126.180 86.245 1.00 35.51 O
ATOM 5 O5' A B 623 47.449 126.568 84.341 1.00 35.17 O
ATOM 6 C5' A B 623 47.075 126.685 82.963 1.00 33.30 C
ATOM 7 C4' A B 623 45.590 126.876 82.868 1.00 31.19 C
ATOM 8 O4' A B 623 44.955 125.719 83.456 1.00 29.60 O
ATOM 9 C3' A B 623 45.073 128.052 83.676 1.00 31.05 C
ATOM 10 O3' A B 623 45.114 129.245 82.906 1.00 32.28 O
ATOM 11 C2' A B 623 43.657 127.625 83.997 1.00 31.14 C
ATOM 12 O2' A B 623 42.824 127.826 82.878 1.00 31.79 O
ATOM 13 C1' A B 623 43.849 126.123 84.233 1.00 33.08 C
ATOM 14 N9 A B 623 44.137 125.738 85.615 1.00 36.28 N
ATOM 15 C8 A B 623 45.184 126.149 86.404 1.00 37.33 C
ATOM 16 N7 A B 623 45.198 125.600 87.593 1.00 38.11 N
ATOM 17 C5 A B 623 44.083 124.776 87.591 1.00 38.04 C
ATOM 18 C6 A B 623 43.544 123.916 88.562 1.00 38.57 C
ATOM 19 N6 A B 623 44.068 123.743 89.775 1.00 37.18 N
ATOM 20 N1 A B 623 42.428 123.231 88.239 1.00 39.60 N
ATOM 21 C2 A B 623 41.894 123.411 87.027 1.00 40.46 C
ATOM 22 N3 A B 623 42.303 124.196 86.033 1.00 39.78 N
ATOM 23 C4 A B 623 43.417 124.857 86.382 1.00 37.33 C
ATOM 24 P G B 624 45.631 130.610 83.571 1.00 31.77 P
ATOM 25 OP1 G B 624 45.948 131.530 82.463 1.00 31.86 O
ATOM 26 OP2 G B 624 46.673 130.285 84.582 1.00 32.34 O
ATOM 27 O5' G B 624 44.356 131.186 84.330 1.00 31.59 O
TER
ATOM 2 P A A 608 34.002 116.646 96.188 1.00 32.63 P
ATOM 3 OP1 A A 608 32.828 117.253 95.521 1.00 32.61 O
ATOM 4 OP2 A A 608 33.904 115.268 96.723 1.00 34.33 O
ATOM 5 O5' A A 608 35.217 116.681 95.163 1.00 32.00 O
ATOM 6 C5' A A 608 35.744 117.919 94.704 1.00 26.40 C
ATOM 7 C4' A A 608 35.015 118.373 93.468 1.00 25.40 C
ATOM 8 O4' A A 608 35.352 119.759 93.257 1.00 26.76 O
ATOM 9 C3' A A 608 35.341 117.676 92.154 1.00 25.71 C
ATOM 10 O3' A A 608 34.508 116.546 91.910 1.00 25.65 O
ATOM 11 C2' A A 608 35.043 118.765 91.140 1.00 26.49 C
ATOM 12 O2' A A 608 33.657 118.912 90.929 1.00 25.46 O
ATOM 13 C1' A A 608 35.533 120.003 91.883 1.00 28.04 C
ATOM 14 N9 A A 608 36.943 120.327 91.678 1.00 31.10 N
ATOM 15 C8 A A 608 37.991 120.083 92.533 1.00 31.45 C
ATOM 16 N7 A A 608 39.138 120.544 92.109 1.00 33.35 N
ATOM 17 C5 A A 608 38.829 121.120 90.884 1.00 33.99 C
ATOM 18 C6 A A 608 39.611 121.785 89.941 1.00 33.85 C
ATOM 19 N6 A A 608 40.910 122.009 90.105 1.00 37.85 N
ATOM 20 N1 A A 608 39.009 122.224 88.817 1.00 33.11 N
ATOM 21 C2 A A 608 37.698 122.010 88.670 1.00 33.77 C
ATOM 22 N3 A A 608 36.849 121.406 89.491 1.00 33.34 N
ATOM 23 C4 A A 608 37.486 120.977 90.597 1.00 33.49 C
ATOM 24 P C A 609 35.016 115.363 90.942 1.00 26.85 P
ATOM 25 OP1 C A 609 33.846 114.494 90.661 1.00 28.34 O
ATOM 26 OP2 C A 609 36.234 114.766 91.526 1.00 29.90 O
ATOM 27 O5' C A 609 35.450 116.083 89.589 1.00 27.06 O
TER
ATOM 1 O3' G B 622 49.138 124.714 84.180 1.00 32.70 O
ATOM 2 P A B 623 48.933 126.195 84.759 1.00 35.42 P
ATOM 3 OP1 A B 623 49.838 127.083 84.005 1.00 35.01 O
ATOM 4 OP2 A B 623 48.983 126.180 86.245 1.00 35.51 O
ATOM 5 O5' A B 623 47.449 126.568 84.341 1.00 35.17 O
ATOM 6 C5' A B 623 47.075 126.685 82.963 1.00 33.30 C
ATOM 7 C4' A B 623 45.590 126.876 82.868 1.00 31.19 C
ATOM 8 O4' A B 623 44.955 125.719 83.456 1.00 29.60 O
ATOM 9 C3' A B 623 45.073 128.052 83.676 1.00 31.05 C
ATOM 10 O3' A B 623 45.114 129.245 82.906 1.00 32.28 O
ATOM 11 C2' A B 623 43.657 127.625 83.997 1.00 31.14 C
ATOM 12 O2' A B 623 42.824 127.826 82.878 1.00 31.79 O
ATOM 13 C1' A B 623 43.849 126.123 84.233 1.00 33.08 C
ATOM 14 N9 A B 623 44.137 125.738 85.615 1.00 36.28 N
ATOM 15 C8 A B 623 45.184 126.149 86.404 1.00 37.33 C
ATOM 16 N7 A B 623 45.198 125.600 87.593 1.00 38.11 N
ATOM 17 C5 A B 623 44.083 124.776 87.591 1.00 38.04 C
ATOM 18 C6 A B 623 43.544 123.916 88.562 1.00 38.57 C
ATOM 19 N6 A B 623 44.068 123.743 89.775 1.00 37.18 N
ATOM 20 N1 A B 623 42.428 123.231 88.239 1.00 39.60 N
ATOM 21 C2 A B 623 41.894 123.411 87.027 1.00 40.46 C
ATOM 22 N3 A B 623 42.303 124.196 86.033 1.00 39.78 N
ATOM 23 C4 A B 623 43.417 124.857 86.382 1.00 37.33 C
ATOM 24 P G B 624 45.631 130.610 83.571 1.00 31.77 P
ATOM 25 OP1 G B 624 45.948 131.530 82.463 1.00 31.86 O
ATOM 26 OP2 G B 624 46.673 130.285 84.582 1.00 32.34 O
ATOM 27 O5' G B 624 44.356 131.186 84.330 1.00 31.59 O
TER
Atoms:
OP1: (32.828,117.253,95.521)
OP2: (33.904,115.268,96.723)
C3': (35.341,117.676,92.154)
C1': (35.533,120.003,91.883)
C5': (35.744,117.919,94.704)
O4': (35.352,119.759,93.257)
C8: (37.991,120.083,92.533)
O2': (33.657,118.912,90.929)
C6: (39.611,121.785,89.941)
C5: (38.829,121.120,90.884)
C4: (37.486,120.977,90.597)
P: (34.002,116.646,96.188)
C4': (35.015,118.373,93.468)
C2': (35.043,118.765,91.140)
C2: (37.698,122.010,88.670)
N1: (39.009,122.224,88.817)
N3: (36.849,121.406,89.491)
N6: (40.910,122.009,90.105)
N7: (39.138,120.544,92.109)
N9: (36.943,120.327,91.678)
O5': (35.217,116.681,95.163)
O3': (34.508,116.546,91.910)
OP2: (33.904,115.268,96.723)
C3': (35.341,117.676,92.154)
C1': (35.533,120.003,91.883)
C5': (35.744,117.919,94.704)
O4': (35.352,119.759,93.257)
C8: (37.991,120.083,92.533)
O2': (33.657,118.912,90.929)
C6: (39.611,121.785,89.941)
C5: (38.829,121.120,90.884)
C4: (37.486,120.977,90.597)
P: (34.002,116.646,96.188)
C4': (35.015,118.373,93.468)
C2': (35.043,118.765,91.140)
C2: (37.698,122.010,88.670)
N1: (39.009,122.224,88.817)
N3: (36.849,121.406,89.491)
N6: (40.910,122.009,90.105)
N7: (39.138,120.544,92.109)
N9: (36.943,120.327,91.678)
O5': (35.217,116.681,95.163)
O3': (34.508,116.546,91.910)
OP1: (49.838,127.083,84.005)
OP2: (48.983,126.180,86.245)
C3': (45.073,128.052,83.676)
C1': (43.849,126.123,84.233)
C5': (47.075,126.685,82.963)
O4': (44.955,125.719,83.456)
C8: (45.184,126.149,86.404)
O2': (42.824,127.826,82.878)
C6: (43.544,123.916,88.562)
C5: (44.083,124.776,87.591)
C4: (43.417,124.857,86.382)
P: (48.933,126.195,84.759)
C4': (45.590,126.876,82.868)
C2': (43.657,127.625,83.997)
C2: (41.894,123.411,87.027)
N1: (42.428,123.231,88.239)
N3: (42.303,124.196,86.033)
N6: (44.068,123.743,89.775)
N7: (45.198,125.600,87.593)
N9: (44.137,125.738,85.615)
O5': (47.449,126.568,84.341)
O3': (45.114,129.245,82.906)
OP2: (48.983,126.180,86.245)
C3': (45.073,128.052,83.676)
C1': (43.849,126.123,84.233)
C5': (47.075,126.685,82.963)
O4': (44.955,125.719,83.456)
C8: (45.184,126.149,86.404)
O2': (42.824,127.826,82.878)
C6: (43.544,123.916,88.562)
C5: (44.083,124.776,87.591)
C4: (43.417,124.857,86.382)
P: (48.933,126.195,84.759)
C4': (45.590,126.876,82.868)
C2': (43.657,127.625,83.997)
C2: (41.894,123.411,87.027)
N1: (42.428,123.231,88.239)
N3: (42.303,124.196,86.033)
N6: (44.068,123.743,89.775)
N7: (45.198,125.600,87.593)
N9: (44.137,125.738,85.615)
O5': (47.449,126.568,84.341)
O3': (45.114,129.245,82.906)
Image (generated by PyMOL):