ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJ9:0608:0623

Extra

PDB:
ATOM 1 O3' U A 607 34.499 117.945 97.666 1.00 43.01 O
ATOM 2 P A A 608 34.091 116.908 96.524 1.00 42.37 P
ATOM 3 OP1 A A 608 32.903 117.461 95.833 1.00 43.12 O
ATOM 4 OP2 A A 608 34.045 115.538 97.102 1.00 42.27 O
ATOM 5 O5' A A 608 35.294 116.967 95.489 1.00 43.88 O
ATOM 6 C5' A A 608 35.843 118.215 95.071 1.00 39.66 C
ATOM 7 C4' A A 608 35.142 118.719 93.836 1.00 37.02 C
ATOM 8 O4' A A 608 35.585 120.079 93.650 1.00 38.82 O
ATOM 9 C3' A A 608 35.430 118.039 92.504 1.00 35.90 C
ATOM 10 O3' A A 608 34.581 116.915 92.245 1.00 34.55 O
ATOM 11 C2' A A 608 35.154 119.164 91.518 1.00 36.86 C
ATOM 12 O2' A A 608 33.779 119.398 91.328 1.00 36.50 O
ATOM 13 C1' A A 608 35.694 120.369 92.277 1.00 38.06 C
ATOM 14 N9 A A 608 37.085 120.725 92.012 1.00 41.11 N
ATOM 15 C8 A A 608 38.157 120.535 92.849 1.00 41.63 C
ATOM 16 N7 A A 608 39.276 121.026 92.390 1.00 43.29 N
ATOM 17 C5 A A 608 38.925 121.561 91.159 1.00 43.24 C
ATOM 18 C6 A A 608 39.667 122.233 90.184 1.00 43.37 C
ATOM 19 N6 A A 608 40.963 122.501 90.313 1.00 45.84 N
ATOM 20 N1 A A 608 39.027 122.629 89.064 1.00 42.55 N
ATOM 21 C2 A A 608 37.723 122.362 88.949 1.00 41.87 C
ATOM 22 N3 A A 608 36.914 121.741 89.799 1.00 41.76 N
ATOM 23 C4 A A 608 37.585 121.362 90.902 1.00 42.20 C
ATOM 24 P C A 609 35.069 115.741 91.243 1.00 36.07 P
ATOM 25 OP1 C A 609 33.890 114.899 90.914 1.00 36.58 O
ATOM 26 OP2 C A 609 36.281 115.096 91.807 1.00 36.28 O
ATOM 27 O5' C A 609 35.515 116.492 89.910 1.00 34.94 O
TER

ATOM 1 O3' G B 622 49.419 125.159 84.661 1.00 39.42 O
ATOM 2 P A B 623 49.049 126.611 85.217 1.00 41.07 P
ATOM 3 OP1 A B 623 49.922 127.583 84.527 1.00 41.76 O
ATOM 4 OP2 A B 623 48.993 126.604 86.697 1.00 43.22 O
ATOM 5 O5' A B 623 47.565 126.823 84.708 1.00 41.25 O
ATOM 6 C5' A B 623 47.282 127.094 83.334 1.00 38.54 C
ATOM 7 C4' A B 623 45.814 127.328 83.185 1.00 37.18 C
ATOM 8 O4' A B 623 45.158 126.181 83.773 1.00 35.41 O
ATOM 9 C3' A B 623 45.299 128.509 83.990 1.00 36.92 C
ATOM 10 O3' A B 623 45.368 129.716 83.250 1.00 38.78 O
ATOM 11 C2' A B 623 43.868 128.108 84.274 1.00 37.22 C
ATOM 12 O2' A B 623 43.064 128.327 83.142 1.00 38.15 O
ATOM 13 C1' A B 623 44.032 126.603 84.513 1.00 38.62 C
ATOM 14 N9 A B 623 44.267 126.232 85.906 1.00 40.13 N
ATOM 15 C8 A B 623 45.262 126.671 86.743 1.00 41.87 C
ATOM 16 N7 A B 623 45.223 126.133 87.935 1.00 43.84 N
ATOM 17 C5 A B 623 44.127 125.286 87.879 1.00 43.08 C
ATOM 18 C6 A B 623 43.562 124.415 88.817 1.00 43.97 C
ATOM 19 N6 A B 623 44.032 124.252 90.053 1.00 44.30 N
ATOM 20 N1 A B 623 42.481 123.704 88.438 1.00 44.70 N
ATOM 21 C2 A B 623 42.009 123.869 87.206 1.00 43.22 C
ATOM 22 N3 A B 623 42.450 124.658 86.237 1.00 42.41 N
ATOM 23 C4 A B 623 43.526 125.345 86.640 1.00 41.15 C
ATOM 24 P G B 624 45.881 131.064 83.960 1.00 42.99 P
ATOM 25 OP1 G B 624 46.253 131.993 82.865 1.00 42.64 O
ATOM 26 OP2 G B 624 46.892 130.714 85.000 1.00 43.23 O
ATOM 27 O5' G B 624 44.590 131.641 84.693 1.00 41.02 O
TER

Atoms:
OP1: (32.903,117.461,95.833)
OP2: (34.045,115.538,97.102)
C3': (35.430,118.039,92.504)
C1': (35.694,120.369,92.277)
C5': (35.843,118.215,95.071)
O4': (35.585,120.079,93.650)
C8: (38.157,120.535,92.849)
O2': (33.779,119.398,91.328)
C6: (39.667,122.233,90.184)
C5: (38.925,121.561,91.159)
C4: (37.585,121.362,90.902)
P: (34.091,116.908,96.524)
C4': (35.142,118.719,93.836)
C2': (35.154,119.164,91.518)
C2: (37.723,122.362,88.949)
N1: (39.027,122.629,89.064)
N3: (36.914,121.741,89.799)
N6: (40.963,122.501,90.313)
N7: (39.276,121.026,92.390)
N9: (37.085,120.725,92.012)
O5': (35.294,116.967,95.489)
O3': (34.581,116.915,92.245)
OP1: (49.922,127.583,84.527)
OP2: (48.993,126.604,86.697)
C3': (45.299,128.509,83.990)
C1': (44.032,126.603,84.513)
C5': (47.282,127.094,83.334)
O4': (45.158,126.181,83.773)
C8: (45.262,126.671,86.743)
O2': (43.064,128.327,83.142)
C6: (43.562,124.415,88.817)
C5: (44.127,125.286,87.879)
C4: (43.526,125.345,86.640)
P: (49.049,126.611,85.217)
C4': (45.814,127.328,83.185)
C2': (43.868,128.108,84.274)
C2: (42.009,123.869,87.206)
N1: (42.481,123.704,88.438)
N3: (42.450,124.658,86.237)
N6: (44.032,124.252,90.053)
N7: (45.223,126.133,87.935)
N9: (44.267,126.232,85.906)
O5': (47.565,126.823,84.708)
O3': (45.368,129.716,83.250)
Image (generated by PyMOL):
PyMOL image
show in jmol