Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01870:01885
Extra
PDB:
ATOM 1 O3' C A1869 104.499 93.458 40.500 1.00 74.18 O
ATOM 2 P A A1870 104.603 91.964 39.902 1.00 75.18 P
ATOM 3 OP1 A A1870 103.800 91.951 38.655 1.00 74.70 O
ATOM 4 OP2 A A1870 104.324 90.964 40.969 1.00 74.40 O
ATOM 5 O5' A A1870 106.132 91.828 39.498 1.00 74.44 O
ATOM 6 C5' A A1870 106.722 92.746 38.573 1.00 75.23 C
ATOM 7 C4' A A1870 108.219 92.682 38.682 1.00 77.04 C
ATOM 8 O4' A A1870 108.624 93.148 39.997 1.00 76.30 O
ATOM 9 C3' A A1870 108.786 91.277 38.609 1.00 78.58 C
ATOM 10 O3' A A1870 108.892 90.792 37.277 1.00 81.70 O
ATOM 11 C2' A A1870 110.123 91.445 39.307 1.00 77.41 C
ATOM 12 O2' A A1870 111.088 92.051 38.473 1.00 78.34 O
ATOM 13 C1' A A1870 109.734 92.388 40.450 1.00 75.90 C
ATOM 14 N9 A A1870 109.319 91.636 41.634 1.00 74.25 N
ATOM 15 C8 A A1870 108.060 91.176 41.945 1.00 74.42 C
ATOM 16 N7 A A1870 108.012 90.474 43.053 1.00 74.30 N
ATOM 17 C5 A A1870 109.324 90.483 43.509 1.00 73.29 C
ATOM 18 C6 A A1870 109.939 89.908 44.638 1.00 73.04 C
ATOM 19 N6 A A1870 109.291 89.168 45.540 1.00 73.43 N
ATOM 20 N1 A A1870 111.262 90.120 44.806 1.00 72.99 N
ATOM 21 C2 A A1870 111.915 90.851 43.894 1.00 72.57 C
ATOM 22 N3 A A1870 111.452 91.434 42.792 1.00 72.08 N
ATOM 23 C4 A A1870 110.136 91.209 42.654 1.00 73.12 C
ATOM 24 P C A1871 108.544 89.252 36.966 1.00 83.49 P
ATOM 25 OP1 C A1871 108.724 89.053 35.501 1.00 82.91 O
ATOM 26 OP2 C A1871 107.230 88.939 37.588 1.00 84.55 O
ATOM 27 O5' C A1871 109.665 88.441 37.763 1.00 81.14 O
TER
ATOM 1 O3' G B1884 111.835 79.392 51.196 1.00 90.54 O
ATOM 2 P A B1885 112.656 80.488 52.043 1.00 89.73 P
ATOM 3 OP1 A B1885 113.684 79.750 52.823 1.00 89.50 O
ATOM 4 OP2 A B1885 111.691 81.373 52.749 1.00 88.96 O
ATOM 5 O5' A B1885 113.395 81.362 50.936 1.00 88.31 O
ATOM 6 C5' A B1885 114.478 80.817 50.167 1.00 87.87 C
ATOM 7 C4' A B1885 114.925 81.816 49.132 1.00 87.73 C
ATOM 8 O4' A B1885 113.839 82.057 48.197 1.00 88.02 O
ATOM 9 C3' A B1885 115.252 83.194 49.680 1.00 87.14 C
ATOM 10 O3' A B1885 116.571 83.253 50.209 1.00 87.57 O
ATOM 11 C2' A B1885 115.054 84.083 48.462 1.00 86.86 C
ATOM 12 O2' A B1885 116.150 84.044 47.574 1.00 85.94 O
ATOM 13 C1' A B1885 113.834 83.423 47.811 1.00 87.70 C
ATOM 14 N9 A B1885 112.571 84.018 48.252 1.00 88.28 N
ATOM 15 C8 A B1885 111.652 83.504 49.138 1.00 87.94 C
ATOM 16 N7 A B1885 110.628 84.293 49.355 1.00 87.83 N
ATOM 17 C5 A B1885 110.886 85.400 48.556 1.00 88.42 C
ATOM 18 C6 A B1885 110.180 86.597 48.341 1.00 88.24 C
ATOM 19 N6 A B1885 109.034 86.896 48.949 1.00 89.14 N
ATOM 20 N1 A B1885 110.702 87.491 47.472 1.00 88.13 N
ATOM 21 C2 A B1885 111.860 87.195 46.871 1.00 89.26 C
ATOM 22 N3 A B1885 112.623 86.108 46.995 1.00 89.69 N
ATOM 23 C4 A B1885 112.073 85.239 47.863 1.00 88.85 C
ATOM 24 P C B1886 116.893 84.249 51.430 1.00 88.28 P
ATOM 25 OP1 C B1886 118.312 84.061 51.827 1.00 88.59 O
ATOM 26 OP2 C B1886 115.820 84.094 52.449 1.00 87.69 O
ATOM 27 O5' C B1886 116.767 85.697 50.783 1.00 86.21 O
TER
ATOM 2 P A A1870 104.603 91.964 39.902 1.00 75.18 P
ATOM 3 OP1 A A1870 103.800 91.951 38.655 1.00 74.70 O
ATOM 4 OP2 A A1870 104.324 90.964 40.969 1.00 74.40 O
ATOM 5 O5' A A1870 106.132 91.828 39.498 1.00 74.44 O
ATOM 6 C5' A A1870 106.722 92.746 38.573 1.00 75.23 C
ATOM 7 C4' A A1870 108.219 92.682 38.682 1.00 77.04 C
ATOM 8 O4' A A1870 108.624 93.148 39.997 1.00 76.30 O
ATOM 9 C3' A A1870 108.786 91.277 38.609 1.00 78.58 C
ATOM 10 O3' A A1870 108.892 90.792 37.277 1.00 81.70 O
ATOM 11 C2' A A1870 110.123 91.445 39.307 1.00 77.41 C
ATOM 12 O2' A A1870 111.088 92.051 38.473 1.00 78.34 O
ATOM 13 C1' A A1870 109.734 92.388 40.450 1.00 75.90 C
ATOM 14 N9 A A1870 109.319 91.636 41.634 1.00 74.25 N
ATOM 15 C8 A A1870 108.060 91.176 41.945 1.00 74.42 C
ATOM 16 N7 A A1870 108.012 90.474 43.053 1.00 74.30 N
ATOM 17 C5 A A1870 109.324 90.483 43.509 1.00 73.29 C
ATOM 18 C6 A A1870 109.939 89.908 44.638 1.00 73.04 C
ATOM 19 N6 A A1870 109.291 89.168 45.540 1.00 73.43 N
ATOM 20 N1 A A1870 111.262 90.120 44.806 1.00 72.99 N
ATOM 21 C2 A A1870 111.915 90.851 43.894 1.00 72.57 C
ATOM 22 N3 A A1870 111.452 91.434 42.792 1.00 72.08 N
ATOM 23 C4 A A1870 110.136 91.209 42.654 1.00 73.12 C
ATOM 24 P C A1871 108.544 89.252 36.966 1.00 83.49 P
ATOM 25 OP1 C A1871 108.724 89.053 35.501 1.00 82.91 O
ATOM 26 OP2 C A1871 107.230 88.939 37.588 1.00 84.55 O
ATOM 27 O5' C A1871 109.665 88.441 37.763 1.00 81.14 O
TER
ATOM 1 O3' G B1884 111.835 79.392 51.196 1.00 90.54 O
ATOM 2 P A B1885 112.656 80.488 52.043 1.00 89.73 P
ATOM 3 OP1 A B1885 113.684 79.750 52.823 1.00 89.50 O
ATOM 4 OP2 A B1885 111.691 81.373 52.749 1.00 88.96 O
ATOM 5 O5' A B1885 113.395 81.362 50.936 1.00 88.31 O
ATOM 6 C5' A B1885 114.478 80.817 50.167 1.00 87.87 C
ATOM 7 C4' A B1885 114.925 81.816 49.132 1.00 87.73 C
ATOM 8 O4' A B1885 113.839 82.057 48.197 1.00 88.02 O
ATOM 9 C3' A B1885 115.252 83.194 49.680 1.00 87.14 C
ATOM 10 O3' A B1885 116.571 83.253 50.209 1.00 87.57 O
ATOM 11 C2' A B1885 115.054 84.083 48.462 1.00 86.86 C
ATOM 12 O2' A B1885 116.150 84.044 47.574 1.00 85.94 O
ATOM 13 C1' A B1885 113.834 83.423 47.811 1.00 87.70 C
ATOM 14 N9 A B1885 112.571 84.018 48.252 1.00 88.28 N
ATOM 15 C8 A B1885 111.652 83.504 49.138 1.00 87.94 C
ATOM 16 N7 A B1885 110.628 84.293 49.355 1.00 87.83 N
ATOM 17 C5 A B1885 110.886 85.400 48.556 1.00 88.42 C
ATOM 18 C6 A B1885 110.180 86.597 48.341 1.00 88.24 C
ATOM 19 N6 A B1885 109.034 86.896 48.949 1.00 89.14 N
ATOM 20 N1 A B1885 110.702 87.491 47.472 1.00 88.13 N
ATOM 21 C2 A B1885 111.860 87.195 46.871 1.00 89.26 C
ATOM 22 N3 A B1885 112.623 86.108 46.995 1.00 89.69 N
ATOM 23 C4 A B1885 112.073 85.239 47.863 1.00 88.85 C
ATOM 24 P C B1886 116.893 84.249 51.430 1.00 88.28 P
ATOM 25 OP1 C B1886 118.312 84.061 51.827 1.00 88.59 O
ATOM 26 OP2 C B1886 115.820 84.094 52.449 1.00 87.69 O
ATOM 27 O5' C B1886 116.767 85.697 50.783 1.00 86.21 O
TER
Atoms:
OP1: (103.800,91.951,38.655)
OP2: (104.324,90.964,40.969)
C3': (108.786,91.277,38.609)
C1': (109.734,92.388,40.450)
C5': (106.722,92.746,38.573)
O4': (108.624,93.148,39.997)
C8: (108.060,91.176,41.945)
O2': (111.088,92.051,38.473)
C6: (109.939,89.908,44.638)
C5: (109.324,90.483,43.509)
C4: (110.136,91.209,42.654)
P: (104.603,91.964,39.902)
C4': (108.219,92.682,38.682)
C2': (110.123,91.445,39.307)
C2: (111.915,90.851,43.894)
N1: (111.262,90.120,44.806)
N3: (111.452,91.434,42.792)
N6: (109.291,89.168,45.540)
N7: (108.012,90.474,43.053)
N9: (109.319,91.636,41.634)
O5': (106.132,91.828,39.498)
O3': (108.892,90.792,37.277)
OP2: (104.324,90.964,40.969)
C3': (108.786,91.277,38.609)
C1': (109.734,92.388,40.450)
C5': (106.722,92.746,38.573)
O4': (108.624,93.148,39.997)
C8: (108.060,91.176,41.945)
O2': (111.088,92.051,38.473)
C6: (109.939,89.908,44.638)
C5: (109.324,90.483,43.509)
C4: (110.136,91.209,42.654)
P: (104.603,91.964,39.902)
C4': (108.219,92.682,38.682)
C2': (110.123,91.445,39.307)
C2: (111.915,90.851,43.894)
N1: (111.262,90.120,44.806)
N3: (111.452,91.434,42.792)
N6: (109.291,89.168,45.540)
N7: (108.012,90.474,43.053)
N9: (109.319,91.636,41.634)
O5': (106.132,91.828,39.498)
O3': (108.892,90.792,37.277)
OP1: (113.684,79.750,52.823)
OP2: (111.691,81.373,52.749)
C3': (115.252,83.194,49.680)
C1': (113.834,83.423,47.811)
C5': (114.478,80.817,50.167)
O4': (113.839,82.057,48.197)
C8: (111.652,83.504,49.138)
O2': (116.150,84.044,47.574)
C6: (110.180,86.597,48.341)
C5: (110.886,85.400,48.556)
C4: (112.073,85.239,47.863)
P: (112.656,80.488,52.043)
C4': (114.925,81.816,49.132)
C2': (115.054,84.083,48.462)
C2: (111.860,87.195,46.871)
N1: (110.702,87.491,47.472)
N3: (112.623,86.108,46.995)
N6: (109.034,86.896,48.949)
N7: (110.628,84.293,49.355)
N9: (112.571,84.018,48.252)
O5': (113.395,81.362,50.936)
O3': (116.571,83.253,50.209)
OP2: (111.691,81.373,52.749)
C3': (115.252,83.194,49.680)
C1': (113.834,83.423,47.811)
C5': (114.478,80.817,50.167)
O4': (113.839,82.057,48.197)
C8: (111.652,83.504,49.138)
O2': (116.150,84.044,47.574)
C6: (110.180,86.597,48.341)
C5: (110.886,85.400,48.556)
C4: (112.073,85.239,47.863)
P: (112.656,80.488,52.043)
C4': (114.925,81.816,49.132)
C2': (115.054,84.083,48.462)
C2: (111.860,87.195,46.871)
N1: (110.702,87.491,47.472)
N3: (112.623,86.108,46.995)
N6: (109.034,86.896,48.949)
N7: (110.628,84.293,49.355)
N9: (112.571,84.018,48.252)
O5': (113.395,81.362,50.936)
O3': (116.571,83.253,50.209)
Image (generated by PyMOL):