Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0608:0623
Extra
PDB:
ATOM 1 O3' U A 607 34.320 117.733 97.375 1.00 37.96 O
ATOM 2 P A A 608 33.961 116.668 96.238 1.00 37.57 P
ATOM 3 OP1 A A 608 32.723 117.112 95.558 1.00 36.67 O
ATOM 4 OP2 A A 608 34.026 115.308 96.823 1.00 38.26 O
ATOM 5 O5' A A 608 35.154 116.806 95.200 1.00 36.27 O
ATOM 6 C5' A A 608 35.590 118.086 94.767 1.00 30.98 C
ATOM 7 C4' A A 608 34.886 118.488 93.493 1.00 28.73 C
ATOM 8 O4' A A 608 35.234 119.870 93.269 1.00 29.38 O
ATOM 9 C3' A A 608 35.272 117.776 92.201 1.00 27.42 C
ATOM 10 O3' A A 608 34.459 116.637 91.930 1.00 28.24 O
ATOM 11 C2' A A 608 34.989 118.841 91.163 1.00 27.91 C
ATOM 12 O2' A A 608 33.607 118.936 90.925 1.00 28.03 O
ATOM 13 C1' A A 608 35.426 120.105 91.897 1.00 28.87 C
ATOM 14 N9 A A 608 36.822 120.494 91.709 1.00 30.73 N
ATOM 15 C8 A A 608 37.862 120.333 92.591 1.00 30.22 C
ATOM 16 N7 A A 608 39.001 120.811 92.158 1.00 31.21 N
ATOM 17 C5 A A 608 38.694 121.316 90.905 1.00 32.24 C
ATOM 18 C6 A A 608 39.471 121.949 89.933 1.00 32.61 C
ATOM 19 N6 A A 608 40.765 122.201 90.086 1.00 35.01 N
ATOM 20 N1 A A 608 38.868 122.319 88.784 1.00 33.33 N
ATOM 21 C2 A A 608 37.565 122.062 88.636 1.00 33.49 C
ATOM 22 N3 A A 608 36.723 121.475 89.478 1.00 32.82 N
ATOM 23 C4 A A 608 37.358 121.120 90.610 1.00 32.43 C
ATOM 24 P C A 609 34.988 115.482 90.932 1.00 31.82 P
ATOM 25 OP1 C A 609 33.849 114.588 90.608 1.00 30.79 O
ATOM 26 OP2 C A 609 36.223 114.897 91.507 1.00 32.60 O
ATOM 27 O5' C A 609 35.399 116.251 89.599 1.00 31.17 O
TER
ATOM 1 O3' G B 622 49.097 124.934 84.196 1.00 37.60 O
ATOM 2 P A B 623 48.808 126.385 84.810 1.00 39.13 P
ATOM 3 OP1 A B 623 49.685 127.373 84.130 1.00 37.89 O
ATOM 4 OP2 A B 623 48.814 126.293 86.293 1.00 37.46 O
ATOM 5 O5' A B 623 47.318 126.681 84.357 1.00 38.23 O
ATOM 6 C5' A B 623 46.994 126.921 82.983 1.00 35.06 C
ATOM 7 C4' A B 623 45.514 127.115 82.857 1.00 32.86 C
ATOM 8 O4' A B 623 44.877 125.938 83.407 1.00 32.20 O
ATOM 9 C3' A B 623 44.960 128.266 83.676 1.00 31.66 C
ATOM 10 O3' A B 623 45.013 129.472 82.932 1.00 33.04 O
ATOM 11 C2' A B 623 43.535 127.813 83.929 1.00 32.41 C
ATOM 12 O2' A B 623 42.747 127.983 82.772 1.00 31.38 O
ATOM 13 C1' A B 623 43.742 126.314 84.158 1.00 34.11 C
ATOM 14 N9 A B 623 43.995 125.919 85.544 1.00 36.33 N
ATOM 15 C8 A B 623 45.023 126.327 86.353 1.00 37.43 C
ATOM 16 N7 A B 623 45.016 125.774 87.540 1.00 38.70 N
ATOM 17 C5 A B 623 43.902 124.949 87.517 1.00 38.69 C
ATOM 18 C6 A B 623 43.346 124.081 88.476 1.00 38.21 C
ATOM 19 N6 A B 623 43.859 123.882 89.687 1.00 36.68 N
ATOM 20 N1 A B 623 42.230 123.410 88.137 1.00 39.24 N
ATOM 21 C2 A B 623 41.718 123.595 86.914 1.00 40.91 C
ATOM 22 N3 A B 623 42.151 124.376 85.925 1.00 39.96 N
ATOM 23 C4 A B 623 43.259 125.035 86.295 1.00 38.05 C
ATOM 24 P G B 624 45.582 130.814 83.612 1.00 36.46 P
ATOM 25 OP1 G B 624 45.902 131.756 82.515 1.00 35.63 O
ATOM 26 OP2 G B 624 46.634 130.451 84.595 1.00 34.67 O
ATOM 27 O5' G B 624 44.338 131.417 84.400 1.00 34.49 O
TER
ATOM 2 P A A 608 33.961 116.668 96.238 1.00 37.57 P
ATOM 3 OP1 A A 608 32.723 117.112 95.558 1.00 36.67 O
ATOM 4 OP2 A A 608 34.026 115.308 96.823 1.00 38.26 O
ATOM 5 O5' A A 608 35.154 116.806 95.200 1.00 36.27 O
ATOM 6 C5' A A 608 35.590 118.086 94.767 1.00 30.98 C
ATOM 7 C4' A A 608 34.886 118.488 93.493 1.00 28.73 C
ATOM 8 O4' A A 608 35.234 119.870 93.269 1.00 29.38 O
ATOM 9 C3' A A 608 35.272 117.776 92.201 1.00 27.42 C
ATOM 10 O3' A A 608 34.459 116.637 91.930 1.00 28.24 O
ATOM 11 C2' A A 608 34.989 118.841 91.163 1.00 27.91 C
ATOM 12 O2' A A 608 33.607 118.936 90.925 1.00 28.03 O
ATOM 13 C1' A A 608 35.426 120.105 91.897 1.00 28.87 C
ATOM 14 N9 A A 608 36.822 120.494 91.709 1.00 30.73 N
ATOM 15 C8 A A 608 37.862 120.333 92.591 1.00 30.22 C
ATOM 16 N7 A A 608 39.001 120.811 92.158 1.00 31.21 N
ATOM 17 C5 A A 608 38.694 121.316 90.905 1.00 32.24 C
ATOM 18 C6 A A 608 39.471 121.949 89.933 1.00 32.61 C
ATOM 19 N6 A A 608 40.765 122.201 90.086 1.00 35.01 N
ATOM 20 N1 A A 608 38.868 122.319 88.784 1.00 33.33 N
ATOM 21 C2 A A 608 37.565 122.062 88.636 1.00 33.49 C
ATOM 22 N3 A A 608 36.723 121.475 89.478 1.00 32.82 N
ATOM 23 C4 A A 608 37.358 121.120 90.610 1.00 32.43 C
ATOM 24 P C A 609 34.988 115.482 90.932 1.00 31.82 P
ATOM 25 OP1 C A 609 33.849 114.588 90.608 1.00 30.79 O
ATOM 26 OP2 C A 609 36.223 114.897 91.507 1.00 32.60 O
ATOM 27 O5' C A 609 35.399 116.251 89.599 1.00 31.17 O
TER
ATOM 1 O3' G B 622 49.097 124.934 84.196 1.00 37.60 O
ATOM 2 P A B 623 48.808 126.385 84.810 1.00 39.13 P
ATOM 3 OP1 A B 623 49.685 127.373 84.130 1.00 37.89 O
ATOM 4 OP2 A B 623 48.814 126.293 86.293 1.00 37.46 O
ATOM 5 O5' A B 623 47.318 126.681 84.357 1.00 38.23 O
ATOM 6 C5' A B 623 46.994 126.921 82.983 1.00 35.06 C
ATOM 7 C4' A B 623 45.514 127.115 82.857 1.00 32.86 C
ATOM 8 O4' A B 623 44.877 125.938 83.407 1.00 32.20 O
ATOM 9 C3' A B 623 44.960 128.266 83.676 1.00 31.66 C
ATOM 10 O3' A B 623 45.013 129.472 82.932 1.00 33.04 O
ATOM 11 C2' A B 623 43.535 127.813 83.929 1.00 32.41 C
ATOM 12 O2' A B 623 42.747 127.983 82.772 1.00 31.38 O
ATOM 13 C1' A B 623 43.742 126.314 84.158 1.00 34.11 C
ATOM 14 N9 A B 623 43.995 125.919 85.544 1.00 36.33 N
ATOM 15 C8 A B 623 45.023 126.327 86.353 1.00 37.43 C
ATOM 16 N7 A B 623 45.016 125.774 87.540 1.00 38.70 N
ATOM 17 C5 A B 623 43.902 124.949 87.517 1.00 38.69 C
ATOM 18 C6 A B 623 43.346 124.081 88.476 1.00 38.21 C
ATOM 19 N6 A B 623 43.859 123.882 89.687 1.00 36.68 N
ATOM 20 N1 A B 623 42.230 123.410 88.137 1.00 39.24 N
ATOM 21 C2 A B 623 41.718 123.595 86.914 1.00 40.91 C
ATOM 22 N3 A B 623 42.151 124.376 85.925 1.00 39.96 N
ATOM 23 C4 A B 623 43.259 125.035 86.295 1.00 38.05 C
ATOM 24 P G B 624 45.582 130.814 83.612 1.00 36.46 P
ATOM 25 OP1 G B 624 45.902 131.756 82.515 1.00 35.63 O
ATOM 26 OP2 G B 624 46.634 130.451 84.595 1.00 34.67 O
ATOM 27 O5' G B 624 44.338 131.417 84.400 1.00 34.49 O
TER
Atoms:
OP1: (32.723,117.112,95.558)
OP2: (34.026,115.308,96.823)
C3': (35.272,117.776,92.201)
C1': (35.426,120.105,91.897)
C5': (35.590,118.086,94.767)
O4': (35.234,119.870,93.269)
C8: (37.862,120.333,92.591)
O2': (33.607,118.936,90.925)
C6: (39.471,121.949,89.933)
C5: (38.694,121.316,90.905)
C4: (37.358,121.120,90.610)
P: (33.961,116.668,96.238)
C4': (34.886,118.488,93.493)
C2': (34.989,118.841,91.163)
C2: (37.565,122.062,88.636)
N1: (38.868,122.319,88.784)
N3: (36.723,121.475,89.478)
N6: (40.765,122.201,90.086)
N7: (39.001,120.811,92.158)
N9: (36.822,120.494,91.709)
O5': (35.154,116.806,95.200)
O3': (34.459,116.637,91.930)
OP2: (34.026,115.308,96.823)
C3': (35.272,117.776,92.201)
C1': (35.426,120.105,91.897)
C5': (35.590,118.086,94.767)
O4': (35.234,119.870,93.269)
C8: (37.862,120.333,92.591)
O2': (33.607,118.936,90.925)
C6: (39.471,121.949,89.933)
C5: (38.694,121.316,90.905)
C4: (37.358,121.120,90.610)
P: (33.961,116.668,96.238)
C4': (34.886,118.488,93.493)
C2': (34.989,118.841,91.163)
C2: (37.565,122.062,88.636)
N1: (38.868,122.319,88.784)
N3: (36.723,121.475,89.478)
N6: (40.765,122.201,90.086)
N7: (39.001,120.811,92.158)
N9: (36.822,120.494,91.709)
O5': (35.154,116.806,95.200)
O3': (34.459,116.637,91.930)
OP1: (49.685,127.373,84.130)
OP2: (48.814,126.293,86.293)
C3': (44.960,128.266,83.676)
C1': (43.742,126.314,84.158)
C5': (46.994,126.921,82.983)
O4': (44.877,125.938,83.407)
C8: (45.023,126.327,86.353)
O2': (42.747,127.983,82.772)
C6: (43.346,124.081,88.476)
C5: (43.902,124.949,87.517)
C4: (43.259,125.035,86.295)
P: (48.808,126.385,84.810)
C4': (45.514,127.115,82.857)
C2': (43.535,127.813,83.929)
C2: (41.718,123.595,86.914)
N1: (42.230,123.410,88.137)
N3: (42.151,124.376,85.925)
N6: (43.859,123.882,89.687)
N7: (45.016,125.774,87.540)
N9: (43.995,125.919,85.544)
O5': (47.318,126.681,84.357)
O3': (45.013,129.472,82.932)
OP2: (48.814,126.293,86.293)
C3': (44.960,128.266,83.676)
C1': (43.742,126.314,84.158)
C5': (46.994,126.921,82.983)
O4': (44.877,125.938,83.407)
C8: (45.023,126.327,86.353)
O2': (42.747,127.983,82.772)
C6: (43.346,124.081,88.476)
C5: (43.902,124.949,87.517)
C4: (43.259,125.035,86.295)
P: (48.808,126.385,84.810)
C4': (45.514,127.115,82.857)
C2': (43.535,127.813,83.929)
C2: (41.718,123.595,86.914)
N1: (42.230,123.410,88.137)
N3: (42.151,124.376,85.925)
N6: (43.859,123.882,89.687)
N7: (45.016,125.774,87.540)
N9: (43.995,125.919,85.544)
O5': (47.318,126.681,84.357)
O3': (45.013,129.472,82.932)
Image (generated by PyMOL):