ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J00:A653:A693

Extra

PDB:
ATOM 1 O3' G A 652 -13.197 149.106 77.775 1.00 1.82 O
ATOM 2 P A A 653 -14.423 149.506 78.729 1.00 37.13 P
ATOM 3 OP1 A A 653 -15.088 150.705 78.172 1.00 38.18 O
ATOM 4 OP2 A A 653 -13.894 149.534 80.111 1.00 36.34 O
ATOM 5 O5' A A 653 -15.456 148.308 78.586 1.00 5.04 O
ATOM 6 C5' A A 653 -16.107 148.053 77.336 1.00 2.92 C
ATOM 7 C4' A A 653 -17.067 146.884 77.461 1.00 2.51 C
ATOM 8 O4' A A 653 -16.350 145.620 77.517 1.00 2.77 O
ATOM 9 C3' A A 653 -17.962 146.877 78.690 1.00 1.95 C
ATOM 10 O3' A A 653 -19.108 147.702 78.536 1.00 0.79 O
ATOM 11 C2' A A 653 -18.338 145.404 78.821 1.00 0.96 C
ATOM 12 O2' A A 653 -19.414 145.038 77.989 1.00 0.79 O
ATOM 13 C1' A A 653 -17.055 144.710 78.353 1.00 0.79 C
ATOM 14 N9 A A 653 -16.189 144.339 79.481 1.00 9.55 N
ATOM 15 C8 A A 653 -15.001 144.922 79.854 1.00 9.14 C
ATOM 16 N7 A A 653 -14.464 144.395 80.926 1.00 8.61 N
ATOM 17 C5 A A 653 -15.352 143.394 81.286 1.00 9.22 C
ATOM 18 C6 A A 653 -15.353 142.477 82.349 1.00 9.05 C
ATOM 19 N6 A A 653 -14.385 142.415 83.278 1.00 7.65 N
ATOM 20 N1 A A 653 -16.390 141.616 82.430 1.00 9.43 N
ATOM 21 C2 A A 653 -17.346 141.675 81.491 1.00 10.23 C
ATOM 22 N3 A A 653 -17.451 142.489 80.441 1.00 11.15 N
ATOM 23 C4 A A 653 -16.413 143.338 80.399 1.00 10.33 C
ATOM 24 P A A 654 -19.848 148.271 79.840 1.00 26.98 P
ATOM 25 OP1 A A 654 -21.032 149.069 79.408 1.00 12.11 O
ATOM 26 OP2 A A 654 -18.800 148.895 80.669 1.00 14.74 O
ATOM 27 O5' A A 654 -20.356 146.973 80.602 1.00 22.90 O
TER

ATOM 1 O3' G B 692 -11.434 137.322 93.040 1.00 4.25 O
ATOM 2 P A B 693 -10.527 136.442 92.050 1.00 39.86 P
ATOM 3 OP1 A B 693 -10.066 135.257 92.811 1.00 24.61 O
ATOM 4 OP2 A B 693 -9.519 137.328 91.386 1.00 24.42 O
ATOM 5 O5' A B 693 -11.576 135.945 90.963 1.00 8.41 O
ATOM 6 C5' A B 693 -12.613 135.064 91.338 1.00 6.84 C
ATOM 7 C4' A B 693 -13.699 135.061 90.304 1.00 7.52 C
ATOM 8 O4' A B 693 -14.312 136.372 90.208 1.00 6.73 O
ATOM 9 C3' A B 693 -13.267 134.741 88.895 1.00 8.71 C
ATOM 10 O3' A B 693 -13.162 133.348 88.708 1.00 10.18 O
ATOM 11 C2' A B 693 -14.398 135.349 88.082 1.00 7.89 C
ATOM 12 O2' A B 693 -15.544 134.520 88.137 1.00 9.59 O
ATOM 13 C1' A B 693 -14.680 136.632 88.869 1.00 7.38 C
ATOM 14 N9 A B 693 -13.873 137.766 88.411 1.00 25.39 N
ATOM 15 C8 A B 693 -12.576 138.049 88.764 1.00 26.43 C
ATOM 16 N7 A B 693 -12.092 139.123 88.191 1.00 25.84 N
ATOM 17 C5 A B 693 -13.140 139.584 87.413 1.00 24.75 C
ATOM 18 C6 A B 693 -13.260 140.689 86.567 1.00 24.94 C
ATOM 19 N6 A B 693 -12.283 141.572 86.368 1.00 24.47 N
ATOM 20 N1 A B 693 -14.434 140.863 85.925 1.00 25.80 N
ATOM 21 C2 A B 693 -15.416 139.979 86.139 1.00 26.06 C
ATOM 22 N3 A B 693 -15.426 138.901 86.920 1.00 25.95 N
ATOM 23 C4 A B 693 -14.244 138.758 87.537 1.00 24.59 C
ATOM 24 P A B 694 -12.247 132.788 87.519 1.00 9.74 P
ATOM 25 OP1 A B 694 -12.205 131.321 87.668 1.00 14.68 O
ATOM 26 OP2 A B 694 -10.981 133.552 87.469 1.00 13.79 O
ATOM 27 O5' A B 694 -13.134 133.108 86.239 1.00 28.72 O
TER

Atoms:
OP1: (-15.088,150.705,78.172)
OP2: (-13.894,149.534,80.111)
C3': (-17.962,146.877,78.690)
C1': (-17.055,144.710,78.353)
C5': (-16.107,148.053,77.336)
O4': (-16.350,145.620,77.517)
C8: (-15.001,144.922,79.854)
O2': (-19.414,145.038,77.989)
C6: (-15.353,142.477,82.349)
C5: (-15.352,143.394,81.286)
C4: (-16.413,143.338,80.399)
P: (-14.423,149.506,78.729)
C4': (-17.067,146.884,77.461)
C2': (-18.338,145.404,78.821)
C2: (-17.346,141.675,81.491)
N1: (-16.390,141.616,82.430)
N3: (-17.451,142.489,80.441)
N6: (-14.385,142.415,83.278)
N7: (-14.464,144.395,80.926)
N9: (-16.189,144.339,79.481)
O5': (-15.456,148.308,78.586)
O3': (-19.108,147.702,78.536)
OP1: (-10.066,135.257,92.811)
OP2: (-9.519,137.328,91.386)
C3': (-13.267,134.741,88.895)
C1': (-14.680,136.632,88.869)
C5': (-12.613,135.064,91.338)
O4': (-14.312,136.372,90.208)
C8: (-12.576,138.049,88.764)
O2': (-15.544,134.520,88.137)
C6: (-13.260,140.689,86.567)
C5: (-13.140,139.584,87.413)
C4: (-14.244,138.758,87.537)
P: (-10.527,136.442,92.050)
C4': (-13.699,135.061,90.304)
C2': (-14.398,135.349,88.082)
C2: (-15.416,139.979,86.139)
N1: (-14.434,140.863,85.925)
N3: (-15.426,138.901,86.920)
N6: (-12.283,141.572,86.368)
N7: (-12.092,139.123,88.191)
N9: (-13.873,137.766,88.411)
O5': (-11.576,135.945,90.963)
O3': (-13.162,133.348,88.708)
Image (generated by PyMOL):
PyMOL image
show in jmol