Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2QEK:A7:B15
Extra
PDB:
ATOM 1 O3' G A 6 -11.567 4.712 -1.093 1.00 28.38 O
ATOM 2 P A A 7 -10.119 4.016 -1.029 1.00 33.42 P
ATOM 3 OP1 A A 7 -9.772 3.513 -2.395 1.00 33.71 O
ATOM 4 OP2 A A 7 -10.124 3.065 0.123 1.00 32.24 O
ATOM 5 O5' A A 7 -9.119 5.196 -0.664 1.00 31.81 O
ATOM 6 C5' A A 7 -8.949 6.321 -1.542 1.00 31.57 C
ATOM 7 C4' A A 7 -8.195 7.415 -0.829 1.00 31.61 C
ATOM 8 O4' A A 7 -8.961 7.831 0.322 1.00 28.39 O
ATOM 9 C3' A A 7 -6.842 7.016 -0.259 1.00 33.53 C
ATOM 10 O3' A A 7 -5.876 7.087 -1.297 1.00 33.98 O
ATOM 11 C2' A A 7 -6.651 8.051 0.845 1.00 32.13 C
ATOM 12 O2' A A 7 -6.313 9.323 0.330 1.00 33.35 O
ATOM 13 C1' A A 7 -8.077 8.161 1.385 1.00 32.07 C
ATOM 14 N9 A A 7 -8.362 7.267 2.505 1.00 31.03 N
ATOM 15 C8 A A 7 -8.906 6.005 2.479 1.00 30.11 C
ATOM 16 N7 A A 7 -9.074 5.477 3.668 1.00 29.99 N
ATOM 17 C5 A A 7 -8.601 6.457 4.535 1.00 31.41 C
ATOM 18 C6 A A 7 -8.496 6.514 5.941 1.00 31.97 C
ATOM 19 N6 A A 7 -8.907 5.541 6.759 1.00 31.11 N
ATOM 20 N1 A A 7 -7.950 7.624 6.482 1.00 32.63 N
ATOM 21 C2 A A 7 -7.547 8.604 5.664 1.00 31.82 C
ATOM 22 N3 A A 7 -7.598 8.669 4.336 1.00 32.24 N
ATOM 23 C4 A A 7 -8.143 7.554 3.830 1.00 31.01 C
ATOM 24 P A A 8 -4.361 6.605 -1.041 1.00 36.02 P
ATOM 25 OP1 A A 8 -3.953 5.709 -2.164 1.00 38.33 O
ATOM 26 OP2 A A 8 -4.273 6.112 0.363 1.00 37.71 O
ATOM 27 O5' A A 8 -3.554 7.968 -1.159 1.00 37.61 O
TER
ATOM 1 O3' C B 14 -6.151 13.596 17.049 1.00 44.60 O
ATOM 2 P A B 15 -7.448 14.025 16.208 1.00 45.97 P
ATOM 3 OP1 A B 15 -7.958 15.292 16.795 1.00 48.44 O
ATOM 4 OP2 A B 15 -8.341 12.846 16.109 1.00 45.98 O
ATOM 5 O5' A B 15 -6.867 14.328 14.758 1.00 42.80 O
ATOM 6 C5' A B 15 -5.839 15.310 14.569 1.00 42.64 C
ATOM 7 C4' A B 15 -5.349 15.298 13.139 1.00 42.19 C
ATOM 8 O4' A B 15 -4.719 14.022 12.838 1.00 41.55 O
ATOM 9 C3' A B 15 -6.403 15.421 12.052 1.00 40.76 C
ATOM 10 O3' A B 15 -6.866 16.761 11.899 1.00 42.81 O
ATOM 11 C2' A B 15 -5.637 14.911 10.835 1.00 40.71 C
ATOM 12 O2' A B 15 -4.698 15.834 10.318 1.00 40.08 O
ATOM 13 C1' A B 15 -4.855 13.747 11.449 1.00 39.26 C
ATOM 14 N9 A B 15 -5.563 12.480 11.283 1.00 35.80 N
ATOM 15 C8 A B 15 -6.305 11.781 12.199 1.00 35.65 C
ATOM 16 N7 A B 15 -6.835 10.681 11.720 1.00 34.94 N
ATOM 17 C5 A B 15 -6.408 10.654 10.401 1.00 34.03 C
ATOM 18 C6 A B 15 -6.641 9.751 9.357 1.00 33.48 C
ATOM 19 N6 A B 15 -7.374 8.647 9.496 1.00 33.26 N
ATOM 20 N1 A B 15 -6.086 10.022 8.152 1.00 34.02 N
ATOM 21 C2 A B 15 -5.339 11.126 8.025 1.00 33.32 C
ATOM 22 N3 A B 15 -5.043 12.053 8.940 1.00 36.36 N
ATOM 23 C4 A B 15 -5.619 11.753 10.120 1.00 36.41 C
ATOM 24 P C B 16 -8.383 17.030 11.434 1.00 43.38 P
ATOM 25 OP1 C B 16 -8.584 18.502 11.466 1.00 43.51 O
ATOM 26 OP2 C B 16 -9.323 16.148 12.162 1.00 39.19 O
ATOM 27 O5' C B 16 -8.382 16.577 9.909 1.00 41.22 O
TER
ATOM 2 P A A 7 -10.119 4.016 -1.029 1.00 33.42 P
ATOM 3 OP1 A A 7 -9.772 3.513 -2.395 1.00 33.71 O
ATOM 4 OP2 A A 7 -10.124 3.065 0.123 1.00 32.24 O
ATOM 5 O5' A A 7 -9.119 5.196 -0.664 1.00 31.81 O
ATOM 6 C5' A A 7 -8.949 6.321 -1.542 1.00 31.57 C
ATOM 7 C4' A A 7 -8.195 7.415 -0.829 1.00 31.61 C
ATOM 8 O4' A A 7 -8.961 7.831 0.322 1.00 28.39 O
ATOM 9 C3' A A 7 -6.842 7.016 -0.259 1.00 33.53 C
ATOM 10 O3' A A 7 -5.876 7.087 -1.297 1.00 33.98 O
ATOM 11 C2' A A 7 -6.651 8.051 0.845 1.00 32.13 C
ATOM 12 O2' A A 7 -6.313 9.323 0.330 1.00 33.35 O
ATOM 13 C1' A A 7 -8.077 8.161 1.385 1.00 32.07 C
ATOM 14 N9 A A 7 -8.362 7.267 2.505 1.00 31.03 N
ATOM 15 C8 A A 7 -8.906 6.005 2.479 1.00 30.11 C
ATOM 16 N7 A A 7 -9.074 5.477 3.668 1.00 29.99 N
ATOM 17 C5 A A 7 -8.601 6.457 4.535 1.00 31.41 C
ATOM 18 C6 A A 7 -8.496 6.514 5.941 1.00 31.97 C
ATOM 19 N6 A A 7 -8.907 5.541 6.759 1.00 31.11 N
ATOM 20 N1 A A 7 -7.950 7.624 6.482 1.00 32.63 N
ATOM 21 C2 A A 7 -7.547 8.604 5.664 1.00 31.82 C
ATOM 22 N3 A A 7 -7.598 8.669 4.336 1.00 32.24 N
ATOM 23 C4 A A 7 -8.143 7.554 3.830 1.00 31.01 C
ATOM 24 P A A 8 -4.361 6.605 -1.041 1.00 36.02 P
ATOM 25 OP1 A A 8 -3.953 5.709 -2.164 1.00 38.33 O
ATOM 26 OP2 A A 8 -4.273 6.112 0.363 1.00 37.71 O
ATOM 27 O5' A A 8 -3.554 7.968 -1.159 1.00 37.61 O
TER
ATOM 1 O3' C B 14 -6.151 13.596 17.049 1.00 44.60 O
ATOM 2 P A B 15 -7.448 14.025 16.208 1.00 45.97 P
ATOM 3 OP1 A B 15 -7.958 15.292 16.795 1.00 48.44 O
ATOM 4 OP2 A B 15 -8.341 12.846 16.109 1.00 45.98 O
ATOM 5 O5' A B 15 -6.867 14.328 14.758 1.00 42.80 O
ATOM 6 C5' A B 15 -5.839 15.310 14.569 1.00 42.64 C
ATOM 7 C4' A B 15 -5.349 15.298 13.139 1.00 42.19 C
ATOM 8 O4' A B 15 -4.719 14.022 12.838 1.00 41.55 O
ATOM 9 C3' A B 15 -6.403 15.421 12.052 1.00 40.76 C
ATOM 10 O3' A B 15 -6.866 16.761 11.899 1.00 42.81 O
ATOM 11 C2' A B 15 -5.637 14.911 10.835 1.00 40.71 C
ATOM 12 O2' A B 15 -4.698 15.834 10.318 1.00 40.08 O
ATOM 13 C1' A B 15 -4.855 13.747 11.449 1.00 39.26 C
ATOM 14 N9 A B 15 -5.563 12.480 11.283 1.00 35.80 N
ATOM 15 C8 A B 15 -6.305 11.781 12.199 1.00 35.65 C
ATOM 16 N7 A B 15 -6.835 10.681 11.720 1.00 34.94 N
ATOM 17 C5 A B 15 -6.408 10.654 10.401 1.00 34.03 C
ATOM 18 C6 A B 15 -6.641 9.751 9.357 1.00 33.48 C
ATOM 19 N6 A B 15 -7.374 8.647 9.496 1.00 33.26 N
ATOM 20 N1 A B 15 -6.086 10.022 8.152 1.00 34.02 N
ATOM 21 C2 A B 15 -5.339 11.126 8.025 1.00 33.32 C
ATOM 22 N3 A B 15 -5.043 12.053 8.940 1.00 36.36 N
ATOM 23 C4 A B 15 -5.619 11.753 10.120 1.00 36.41 C
ATOM 24 P C B 16 -8.383 17.030 11.434 1.00 43.38 P
ATOM 25 OP1 C B 16 -8.584 18.502 11.466 1.00 43.51 O
ATOM 26 OP2 C B 16 -9.323 16.148 12.162 1.00 39.19 O
ATOM 27 O5' C B 16 -8.382 16.577 9.909 1.00 41.22 O
TER
Atoms:
OP1: (-9.772,3.513,-2.395)
OP2: (-10.124,3.065,0.123)
C3': (-6.842,7.016,-0.259)
C1': (-8.077,8.161,1.385)
C5': (-8.949,6.321,-1.542)
O4': (-8.961,7.831,0.322)
C8: (-8.906,6.005,2.479)
O2': (-6.313,9.323,0.330)
C6: (-8.496,6.514,5.941)
C5: (-8.601,6.457,4.535)
C4: (-8.143,7.554,3.830)
P: (-10.119,4.016,-1.029)
C4': (-8.195,7.415,-0.829)
C2': (-6.651,8.051,0.845)
C2: (-7.547,8.604,5.664)
N1: (-7.950,7.624,6.482)
N3: (-7.598,8.669,4.336)
N6: (-8.907,5.541,6.759)
N7: (-9.074,5.477,3.668)
N9: (-8.362,7.267,2.505)
O5': (-9.119,5.196,-0.664)
O3': (-5.876,7.087,-1.297)
OP2: (-10.124,3.065,0.123)
C3': (-6.842,7.016,-0.259)
C1': (-8.077,8.161,1.385)
C5': (-8.949,6.321,-1.542)
O4': (-8.961,7.831,0.322)
C8: (-8.906,6.005,2.479)
O2': (-6.313,9.323,0.330)
C6: (-8.496,6.514,5.941)
C5: (-8.601,6.457,4.535)
C4: (-8.143,7.554,3.830)
P: (-10.119,4.016,-1.029)
C4': (-8.195,7.415,-0.829)
C2': (-6.651,8.051,0.845)
C2: (-7.547,8.604,5.664)
N1: (-7.950,7.624,6.482)
N3: (-7.598,8.669,4.336)
N6: (-8.907,5.541,6.759)
N7: (-9.074,5.477,3.668)
N9: (-8.362,7.267,2.505)
O5': (-9.119,5.196,-0.664)
O3': (-5.876,7.087,-1.297)
OP1: (-7.958,15.292,16.795)
OP2: (-8.341,12.846,16.109)
C3': (-6.403,15.421,12.052)
C1': (-4.855,13.747,11.449)
C5': (-5.839,15.310,14.569)
O4': (-4.719,14.022,12.838)
C8: (-6.305,11.781,12.199)
O2': (-4.698,15.834,10.318)
C6: (-6.641,9.751,9.357)
C5: (-6.408,10.654,10.401)
C4: (-5.619,11.753,10.120)
P: (-7.448,14.025,16.208)
C4': (-5.349,15.298,13.139)
C2': (-5.637,14.911,10.835)
C2: (-5.339,11.126,8.025)
N1: (-6.086,10.022,8.152)
N3: (-5.043,12.053,8.940)
N6: (-7.374,8.647,9.496)
N7: (-6.835,10.681,11.720)
N9: (-5.563,12.480,11.283)
O5': (-6.867,14.328,14.758)
O3': (-6.866,16.761,11.899)
OP2: (-8.341,12.846,16.109)
C3': (-6.403,15.421,12.052)
C1': (-4.855,13.747,11.449)
C5': (-5.839,15.310,14.569)
O4': (-4.719,14.022,12.838)
C8: (-6.305,11.781,12.199)
O2': (-4.698,15.834,10.318)
C6: (-6.641,9.751,9.357)
C5: (-6.408,10.654,10.401)
C4: (-5.619,11.753,10.120)
P: (-7.448,14.025,16.208)
C4': (-5.349,15.298,13.139)
C2': (-5.637,14.911,10.835)
C2: (-5.339,11.126,8.025)
N1: (-6.086,10.022,8.152)
N3: (-5.043,12.053,8.940)
N6: (-7.374,8.647,9.496)
N7: (-6.835,10.681,11.720)
N9: (-5.563,12.480,11.283)
O5': (-6.867,14.328,14.758)
O3': (-6.866,16.761,11.899)
Image (generated by PyMOL):