Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3BNL:A16:B6
Extra
PDB:
ATOM 1 O3' A A 15 45.017 -1.227 3.020 1.00 53.80 O
ATOM 2 P A A 16 45.549 -1.608 4.505 1.00 42.22 P
ATOM 3 OP1 A A 16 44.480 -2.352 5.182 1.00 27.84 O
ATOM 4 OP2 A A 16 46.135 -0.410 5.171 1.00 26.72 O
ATOM 5 O5' A A 16 46.725 -2.656 4.245 1.00 36.79 O
ATOM 6 C5' A A 16 46.452 -3.916 3.634 1.00 33.43 C
ATOM 7 C4' A A 16 47.736 -4.594 3.208 1.00 29.86 C
ATOM 8 O4' A A 16 48.360 -3.837 2.131 1.00 44.67 O
ATOM 9 C3' A A 16 48.818 -4.702 4.274 1.00 44.49 C
ATOM 10 O3' A A 16 48.613 -5.819 5.143 1.00 32.04 O
ATOM 11 C2' A A 16 50.076 -4.831 3.418 1.00 35.35 C
ATOM 12 O2' A A 16 50.261 -6.120 2.868 1.00 27.04 O
ATOM 13 C1' A A 16 49.770 -3.831 2.303 1.00 27.10 C
ATOM 14 N9 A A 16 50.163 -2.485 2.712 1.00 35.15 N
ATOM 15 C8 A A 16 49.349 -1.442 3.088 1.00 34.74 C
ATOM 16 N7 A A 16 50.004 -0.364 3.445 1.00 34.91 N
ATOM 17 C5 A A 16 51.338 -0.718 3.285 1.00 36.51 C
ATOM 18 C6 A A 16 52.535 -0.013 3.495 1.00 33.22 C
ATOM 19 N6 A A 16 52.582 1.251 3.923 1.00 34.00 N
ATOM 20 N1 A A 16 53.696 -0.657 3.243 1.00 49.72 N
ATOM 21 C2 A A 16 53.644 -1.922 2.801 1.00 42.62 C
ATOM 22 N3 A A 16 52.583 -2.686 2.560 1.00 28.97 N
ATOM 23 C4 A A 16 51.448 -2.018 2.827 1.00 28.70 C
ATOM 24 P G A 17 49.072 -5.730 6.689 1.00 49.31 P
ATOM 25 OP1 G A 17 48.863 -7.077 7.277 1.00 61.34 O
ATOM 26 OP2 G A 17 48.474 -4.542 7.348 1.00 16.52 O
ATOM 27 O5' G A 17 50.637 -5.447 6.624 1.00 49.23 O
TER
ATOM 1 O3' C B 5 59.499 6.771 11.073 1.00 45.21 O
ATOM 2 P A B 6 59.954 7.451 9.695 1.00 69.20 P
ATOM 3 OP1 A B 6 61.280 8.076 9.932 1.00 70.10 O
ATOM 4 OP2 A B 6 58.824 8.285 9.201 1.00 42.70 O
ATOM 5 O5' A B 6 60.173 6.212 8.720 1.00 46.46 O
ATOM 6 C5' A B 6 61.162 5.235 9.016 1.00 49.85 C
ATOM 7 C4' A B 6 60.974 4.021 8.143 1.00 52.41 C
ATOM 8 O4' A B 6 59.691 3.413 8.440 1.00 54.06 O
ATOM 9 C3' A B 6 60.910 4.290 6.649 1.00 48.81 C
ATOM 10 O3' A B 6 62.206 4.380 6.078 1.00 62.36 O
ATOM 11 C2' A B 6 60.185 3.053 6.147 1.00 45.94 C
ATOM 12 O2' A B 6 61.039 1.931 6.086 1.00 46.15 O
ATOM 13 C1' A B 6 59.152 2.848 7.255 1.00 51.09 C
ATOM 14 N9 A B 6 57.881 3.509 6.971 1.00 42.69 N
ATOM 15 C8 A B 6 57.406 4.698 7.465 1.00 39.05 C
ATOM 16 N7 A B 6 56.203 5.004 7.044 1.00 41.07 N
ATOM 17 C5 A B 6 55.867 3.947 6.208 1.00 42.61 C
ATOM 18 C6 A B 6 54.714 3.663 5.456 1.00 53.75 C
ATOM 19 N6 A B 6 53.633 4.449 5.427 1.00 39.28 N
ATOM 20 N1 A B 6 54.708 2.525 4.724 1.00 53.89 N
ATOM 21 C2 A B 6 55.789 1.733 4.756 1.00 33.67 C
ATOM 22 N3 A B 6 56.926 1.890 5.427 1.00 38.49 N
ATOM 23 C4 A B 6 56.898 3.028 6.144 1.00 39.97 C
ATOM 24 P C B 7 62.443 5.308 4.790 1.00 56.34 P
ATOM 25 OP1 C B 7 63.834 5.060 4.334 1.00 69.59 O
ATOM 26 OP2 C B 7 62.010 6.690 5.127 1.00 56.00 O
ATOM 27 O5' C B 7 61.464 4.709 3.682 1.00 64.23 O
TER
ATOM 2 P A A 16 45.549 -1.608 4.505 1.00 42.22 P
ATOM 3 OP1 A A 16 44.480 -2.352 5.182 1.00 27.84 O
ATOM 4 OP2 A A 16 46.135 -0.410 5.171 1.00 26.72 O
ATOM 5 O5' A A 16 46.725 -2.656 4.245 1.00 36.79 O
ATOM 6 C5' A A 16 46.452 -3.916 3.634 1.00 33.43 C
ATOM 7 C4' A A 16 47.736 -4.594 3.208 1.00 29.86 C
ATOM 8 O4' A A 16 48.360 -3.837 2.131 1.00 44.67 O
ATOM 9 C3' A A 16 48.818 -4.702 4.274 1.00 44.49 C
ATOM 10 O3' A A 16 48.613 -5.819 5.143 1.00 32.04 O
ATOM 11 C2' A A 16 50.076 -4.831 3.418 1.00 35.35 C
ATOM 12 O2' A A 16 50.261 -6.120 2.868 1.00 27.04 O
ATOM 13 C1' A A 16 49.770 -3.831 2.303 1.00 27.10 C
ATOM 14 N9 A A 16 50.163 -2.485 2.712 1.00 35.15 N
ATOM 15 C8 A A 16 49.349 -1.442 3.088 1.00 34.74 C
ATOM 16 N7 A A 16 50.004 -0.364 3.445 1.00 34.91 N
ATOM 17 C5 A A 16 51.338 -0.718 3.285 1.00 36.51 C
ATOM 18 C6 A A 16 52.535 -0.013 3.495 1.00 33.22 C
ATOM 19 N6 A A 16 52.582 1.251 3.923 1.00 34.00 N
ATOM 20 N1 A A 16 53.696 -0.657 3.243 1.00 49.72 N
ATOM 21 C2 A A 16 53.644 -1.922 2.801 1.00 42.62 C
ATOM 22 N3 A A 16 52.583 -2.686 2.560 1.00 28.97 N
ATOM 23 C4 A A 16 51.448 -2.018 2.827 1.00 28.70 C
ATOM 24 P G A 17 49.072 -5.730 6.689 1.00 49.31 P
ATOM 25 OP1 G A 17 48.863 -7.077 7.277 1.00 61.34 O
ATOM 26 OP2 G A 17 48.474 -4.542 7.348 1.00 16.52 O
ATOM 27 O5' G A 17 50.637 -5.447 6.624 1.00 49.23 O
TER
ATOM 1 O3' C B 5 59.499 6.771 11.073 1.00 45.21 O
ATOM 2 P A B 6 59.954 7.451 9.695 1.00 69.20 P
ATOM 3 OP1 A B 6 61.280 8.076 9.932 1.00 70.10 O
ATOM 4 OP2 A B 6 58.824 8.285 9.201 1.00 42.70 O
ATOM 5 O5' A B 6 60.173 6.212 8.720 1.00 46.46 O
ATOM 6 C5' A B 6 61.162 5.235 9.016 1.00 49.85 C
ATOM 7 C4' A B 6 60.974 4.021 8.143 1.00 52.41 C
ATOM 8 O4' A B 6 59.691 3.413 8.440 1.00 54.06 O
ATOM 9 C3' A B 6 60.910 4.290 6.649 1.00 48.81 C
ATOM 10 O3' A B 6 62.206 4.380 6.078 1.00 62.36 O
ATOM 11 C2' A B 6 60.185 3.053 6.147 1.00 45.94 C
ATOM 12 O2' A B 6 61.039 1.931 6.086 1.00 46.15 O
ATOM 13 C1' A B 6 59.152 2.848 7.255 1.00 51.09 C
ATOM 14 N9 A B 6 57.881 3.509 6.971 1.00 42.69 N
ATOM 15 C8 A B 6 57.406 4.698 7.465 1.00 39.05 C
ATOM 16 N7 A B 6 56.203 5.004 7.044 1.00 41.07 N
ATOM 17 C5 A B 6 55.867 3.947 6.208 1.00 42.61 C
ATOM 18 C6 A B 6 54.714 3.663 5.456 1.00 53.75 C
ATOM 19 N6 A B 6 53.633 4.449 5.427 1.00 39.28 N
ATOM 20 N1 A B 6 54.708 2.525 4.724 1.00 53.89 N
ATOM 21 C2 A B 6 55.789 1.733 4.756 1.00 33.67 C
ATOM 22 N3 A B 6 56.926 1.890 5.427 1.00 38.49 N
ATOM 23 C4 A B 6 56.898 3.028 6.144 1.00 39.97 C
ATOM 24 P C B 7 62.443 5.308 4.790 1.00 56.34 P
ATOM 25 OP1 C B 7 63.834 5.060 4.334 1.00 69.59 O
ATOM 26 OP2 C B 7 62.010 6.690 5.127 1.00 56.00 O
ATOM 27 O5' C B 7 61.464 4.709 3.682 1.00 64.23 O
TER
Atoms:
OP1: (44.480,-2.352,5.182)
OP2: (46.135,-0.410,5.171)
C3': (48.818,-4.702,4.274)
C1': (49.770,-3.831,2.303)
C5': (46.452,-3.916,3.634)
O4': (48.360,-3.837,2.131)
C8: (49.349,-1.442,3.088)
O2': (50.261,-6.120,2.868)
C6: (52.535,-0.013,3.495)
C5: (51.338,-0.718,3.285)
C4: (51.448,-2.018,2.827)
P: (45.549,-1.608,4.505)
C4': (47.736,-4.594,3.208)
C2': (50.076,-4.831,3.418)
C2: (53.644,-1.922,2.801)
N1: (53.696,-0.657,3.243)
N3: (52.583,-2.686,2.560)
N6: (52.582,1.251,3.923)
N7: (50.004,-0.364,3.445)
N9: (50.163,-2.485,2.712)
O5': (46.725,-2.656,4.245)
O3': (48.613,-5.819,5.143)
OP2: (46.135,-0.410,5.171)
C3': (48.818,-4.702,4.274)
C1': (49.770,-3.831,2.303)
C5': (46.452,-3.916,3.634)
O4': (48.360,-3.837,2.131)
C8: (49.349,-1.442,3.088)
O2': (50.261,-6.120,2.868)
C6: (52.535,-0.013,3.495)
C5: (51.338,-0.718,3.285)
C4: (51.448,-2.018,2.827)
P: (45.549,-1.608,4.505)
C4': (47.736,-4.594,3.208)
C2': (50.076,-4.831,3.418)
C2: (53.644,-1.922,2.801)
N1: (53.696,-0.657,3.243)
N3: (52.583,-2.686,2.560)
N6: (52.582,1.251,3.923)
N7: (50.004,-0.364,3.445)
N9: (50.163,-2.485,2.712)
O5': (46.725,-2.656,4.245)
O3': (48.613,-5.819,5.143)
OP1: (61.280,8.076,9.932)
OP2: (58.824,8.285,9.201)
C3': (60.910,4.290,6.649)
C1': (59.152,2.848,7.255)
C5': (61.162,5.235,9.016)
O4': (59.691,3.413,8.440)
C8: (57.406,4.698,7.465)
O2': (61.039,1.931,6.086)
C6: (54.714,3.663,5.456)
C5: (55.867,3.947,6.208)
C4: (56.898,3.028,6.144)
P: (59.954,7.451,9.695)
C4': (60.974,4.021,8.143)
C2': (60.185,3.053,6.147)
C2: (55.789,1.733,4.756)
N1: (54.708,2.525,4.724)
N3: (56.926,1.890,5.427)
N6: (53.633,4.449,5.427)
N7: (56.203,5.004,7.044)
N9: (57.881,3.509,6.971)
O5': (60.173,6.212,8.720)
O3': (62.206,4.380,6.078)
OP2: (58.824,8.285,9.201)
C3': (60.910,4.290,6.649)
C1': (59.152,2.848,7.255)
C5': (61.162,5.235,9.016)
O4': (59.691,3.413,8.440)
C8: (57.406,4.698,7.465)
O2': (61.039,1.931,6.086)
C6: (54.714,3.663,5.456)
C5: (55.867,3.947,6.208)
C4: (56.898,3.028,6.144)
P: (59.954,7.451,9.695)
C4': (60.974,4.021,8.143)
C2': (60.185,3.053,6.147)
C2: (55.789,1.733,4.756)
N1: (54.708,2.525,4.724)
N3: (56.926,1.890,5.427)
N6: (53.633,4.449,5.427)
N7: (56.203,5.004,7.044)
N9: (57.881,3.509,6.971)
O5': (60.173,6.212,8.720)
O3': (62.206,4.380,6.078)
Image (generated by PyMOL):