ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CD6:0608:0623

Extra

PDB:
ATOM 1 O3' U A 607 34.352 118.021 97.807 1.00 37.06 O
ATOM 2 P A A 608 33.921 116.962 96.681 1.00 36.09 P
ATOM 3 OP1 A A 608 32.744 117.546 96.007 1.00 37.91 O
ATOM 4 OP2 A A 608 33.826 115.608 97.262 1.00 38.43 O
ATOM 5 O5' A A 608 35.119 116.960 95.635 1.00 34.64 O
ATOM 6 C5' A A 608 35.657 118.185 95.147 1.00 30.50 C
ATOM 7 C4' A A 608 34.922 118.640 93.909 1.00 29.60 C
ATOM 8 O4' A A 608 35.256 120.031 93.708 1.00 29.71 O
ATOM 9 C3' A A 608 35.268 117.944 92.593 1.00 29.90 C
ATOM 10 O3' A A 608 34.409 116.843 92.309 1.00 28.66 O
ATOM 11 C2' A A 608 35.013 119.036 91.573 1.00 30.81 C
ATOM 12 O2' A A 608 33.636 119.156 91.315 1.00 31.31 O
ATOM 13 C1' A A 608 35.469 120.278 92.336 1.00 32.15 C
ATOM 14 N9 A A 608 36.876 120.640 92.154 1.00 32.76 N
ATOM 15 C8 A A 608 37.915 120.411 93.018 1.00 31.70 C
ATOM 16 N7 A A 608 39.057 120.896 92.610 1.00 32.94 N
ATOM 17 C5 A A 608 38.756 121.476 91.388 1.00 34.27 C
ATOM 18 C6 A A 608 39.543 122.165 90.452 1.00 35.40 C
ATOM 19 N6 A A 608 40.838 122.416 90.630 1.00 35.11 N
ATOM 20 N1 A A 608 38.942 122.601 89.319 1.00 36.08 N
ATOM 21 C2 A A 608 37.635 122.365 89.159 1.00 35.01 C
ATOM 22 N3 A A 608 36.788 121.739 89.971 1.00 34.99 N
ATOM 23 C4 A A 608 37.420 121.313 91.084 1.00 34.48 C
ATOM 24 P C A 609 34.913 115.652 91.347 1.00 29.28 P
ATOM 25 OP1 C A 609 33.752 114.777 91.071 1.00 32.25 O
ATOM 26 OP2 C A 609 36.127 115.057 91.947 1.00 30.90 O
ATOM 27 O5' C A 609 35.339 116.369 89.988 1.00 29.07 O
TER

ATOM 1 O3' G B 622 48.979 124.976 84.589 1.00 32.68 O
ATOM 2 P A B 623 48.734 126.437 85.200 1.00 35.44 P
ATOM 3 OP1 A B 623 49.664 127.353 84.504 1.00 34.21 O
ATOM 4 OP2 A B 623 48.749 126.358 86.676 1.00 38.55 O
ATOM 5 O5' A B 623 47.250 126.810 84.774 1.00 36.35 O
ATOM 6 C5' A B 623 46.886 126.955 83.392 1.00 35.97 C
ATOM 7 C4' A B 623 45.408 127.170 83.292 1.00 33.89 C
ATOM 8 O4' A B 623 44.752 126.031 83.890 1.00 36.00 O
ATOM 9 C3' A B 623 44.917 128.363 84.087 1.00 33.75 C
ATOM 10 O3' A B 623 44.978 129.528 83.287 1.00 32.95 O
ATOM 11 C2' A B 623 43.492 127.970 84.431 1.00 36.90 C
ATOM 12 O2' A B 623 42.612 128.187 83.350 1.00 38.50 O
ATOM 13 C1' A B 623 43.646 126.462 84.657 1.00 39.58 C
ATOM 14 N9 A B 623 43.906 126.064 86.038 1.00 43.24 N
ATOM 15 C8 A B 623 44.913 126.502 86.865 1.00 45.74 C
ATOM 16 N7 A B 623 44.929 125.915 88.035 1.00 45.88 N
ATOM 17 C5 A B 623 43.857 125.041 87.981 1.00 44.91 C
ATOM 18 C6 A B 623 43.353 124.124 88.901 1.00 44.96 C
ATOM 19 N6 A B 623 43.894 123.910 90.099 1.00 44.76 N
ATOM 20 N1 A B 623 42.265 123.413 88.545 1.00 46.26 N
ATOM 21 C2 A B 623 41.734 123.615 87.335 1.00 46.52 C
ATOM 22 N3 A B 623 42.127 124.443 86.373 1.00 46.17 N
ATOM 23 C4 A B 623 43.207 125.136 86.764 1.00 44.42 C
ATOM 24 P G B 624 45.516 130.902 83.913 1.00 36.84 P
ATOM 25 OP1 G B 624 45.813 131.827 82.791 1.00 34.46 O
ATOM 26 OP2 G B 624 46.577 130.591 84.914 1.00 36.03 O
ATOM 27 O5' G B 624 44.258 131.490 84.689 1.00 33.46 O
TER

Atoms:
OP1: (32.744,117.546,96.007)
OP2: (33.826,115.608,97.262)
C3': (35.268,117.944,92.593)
C1': (35.469,120.278,92.336)
C5': (35.657,118.185,95.147)
O4': (35.256,120.031,93.708)
C8: (37.915,120.411,93.018)
O2': (33.636,119.156,91.315)
C6: (39.543,122.165,90.452)
C5: (38.756,121.476,91.388)
C4: (37.420,121.313,91.084)
P: (33.921,116.962,96.681)
C4': (34.922,118.640,93.909)
C2': (35.013,119.036,91.573)
C2: (37.635,122.365,89.159)
N1: (38.942,122.601,89.319)
N3: (36.788,121.739,89.971)
N6: (40.838,122.416,90.630)
N7: (39.057,120.896,92.610)
N9: (36.876,120.640,92.154)
O5': (35.119,116.960,95.635)
O3': (34.409,116.843,92.309)
OP1: (49.664,127.353,84.504)
OP2: (48.749,126.358,86.676)
C3': (44.917,128.363,84.087)
C1': (43.646,126.462,84.657)
C5': (46.886,126.955,83.392)
O4': (44.752,126.031,83.890)
C8: (44.913,126.502,86.865)
O2': (42.612,128.187,83.350)
C6: (43.353,124.124,88.901)
C5: (43.857,125.041,87.981)
C4: (43.207,125.136,86.764)
P: (48.734,126.437,85.200)
C4': (45.408,127.170,83.292)
C2': (43.492,127.970,84.431)
C2: (41.734,123.615,87.335)
N1: (42.265,123.413,88.545)
N3: (42.127,124.443,86.373)
N6: (43.894,123.910,90.099)
N7: (44.929,125.915,88.035)
N9: (43.906,126.064,86.038)
O5': (47.250,126.810,84.774)
O3': (44.978,129.528,83.287)
Image (generated by PyMOL):
PyMOL image
show in jmol